RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 DYNC1I1O14576 645 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 TNNC1P63316 161 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 GABPAQ06546 454 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 SPOUT1Q5T280 376 aaKnown RBP12.62□□□□□ -0.39
RPAP1-204ENST00000562303 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 LZTFL1Q9NQ48 299 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 MKRN1Q9UHC7 482 aaKnown RBP12.62□□□□□ -0.39
RPAP1-204ENST00000562303 TNFAIP3P21580 790 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 EXOC7Q9UPT5 735 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 DNMBPQ6XZF7 1577 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 SPOPO43791 374 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 ZNF569Q5MCW4 686 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 HOOK2Q96ED9 719 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 SRRTQ9BXP5 876 aaKnown RBP12.62□□□□□ -0.39
RPAP1-204ENST00000562303 UHRF1BP1LA0JNW5 1464 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 MAST3O60307 1309 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 DKC1O60832 514 aaKnown RBP eCLIP12.62□□□□□ -0.39
RPAP1-204ENST00000562303 ERCC5P28715 1186 aaPredicted RBP12.62□□□□□ -0.39
RPAP1-204ENST00000562303 MNAT1P51948 309 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 CSRNP2Q9H175 543 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 RSPH14Q9UHP6 348 aa12.62□□□□□ -0.39
RPAP1-204ENST00000562303 PLCD1P51178 756 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 PRIMPOLQ96LW4 560 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 SEC62Q99442 399 aaKnown RBP12.61□□□□□ -0.39
RPAP1-204ENST00000562303 NAP1L3Q99457 506 aaPredicted RBP12.61□□□□□ -0.39
RPAP1-204ENST00000562303 BICC1Q9H694 974 aaKnown RBP12.61□□□□□ -0.39
RPAP1-204ENST00000562303 H0YIN7 160 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 ZBED4O75132 1171 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 AZI2Q9H6S1 392 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 MAP3K5Q99683 1374 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 PTPN23Q9H3S7 1636 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 ARHGEF35A5YM69 484 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 M0QZ92 97 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
RPAP1-204ENST00000562303 LIN9Q5TKA1 542 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 HAUS3Q68CZ6 603 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 NOL3O60936 208 aaKnown RBP12.61□□□□□ -0.39
RPAP1-204ENST00000562303 AK2P54819 239 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 DPP8Q6V1X1 898 aaPredicted RBP12.61□□□□□ -0.39
RPAP1-204ENST00000562303 CDAN1Q8IWY9 1227 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 GPATCH11Q8N954 259 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 TSGA10Q9BZW7 698 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 RALGAPBQ86X10 1494 aa12.61□□□□□ -0.39
RPAP1-204ENST00000562303 CCNT1O60563 726 aaKnown RBP12.6□□□□□ -0.39
RPAP1-204ENST00000562303 CCDC121Q6ZUS5 278 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 NOX5Q96PH1 765 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 NOC4LQ9BVI4 516 aaKnown RBP12.6□□□□□ -0.39
RPAP1-204ENST00000562303 FLT4P35916 1363 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 HSPA2P54652 639 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 PARP10Q53GL7 1025 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 CTNND2Q9UQB3 1225 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 CALUO43852 315 aaPredicted RBP12.6□□□□□ -0.39
RPAP1-204ENST00000562303 STK10O94804 968 aaKnown RBP12.6□□□□□ -0.39
RPAP1-204ENST00000562303 ITGA6P23229 1130 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 PDE4DQ08499 809 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 MAEAQ7L5Y9 396 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 GPR161Q8N6U8 529 aaKnown RBP12.6□□□□□ -0.39
RPAP1-204ENST00000562303 FAM89AQ96GI7 184 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
RPAP1-204ENST00000562303 ZBTB24O43167 697 aaPredicted RBP12.6□□□□□ -0.39
RPAP1-204ENST00000562303 TYRO3Q06418 890 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 TCIRG1Q13488 830 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 CPLX4Q7Z7G2 160 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 ARMT1Q9H993 441 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 NCKAP5LQ9HCH0 1330 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 GCP02774 474 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 VAV2P52735 878 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
RPAP1-204ENST00000562303 CLUL1Q15846 466 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 NCAPH2Q6IBW4 605 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 RUFY3Q7L099 469 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 UBLCP1Q8WVY7 318 aaPredicted RBP12.6□□□□□ -0.39
RPAP1-204ENST00000562303 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
RPAP1-204ENST00000562303 SETDB1Q15047 1291 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 IFNKQ9P0W0 207 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 KMT5BQ4FZB7 885 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 CPXCR1Q8N123 301 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 KRT222Q8N1A0 295 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 RIMS2Q9UQ26 1411 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 PIK3AP1Q6ZUJ8 805 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 FNBP4Q8N3X1 1017 aaPredicted RBP12.59□□□□□ -0.39
RPAP1-204ENST00000562303 TOP2BQ02880 1626 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 B4E1Z4 1266 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 PPP1R2P41236 205 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 NOLC1Q14978 699 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPAP1-204ENST00000562303 PUM3Q15397 648 aaKnown RBP12.59□□□□□ -0.39
RPAP1-204ENST00000562303 CCDC110Q8TBZ0 833 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 TBC1D31Q96DN5 1066 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 RHOXF2BP0C7M4 288 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 DNM2P50570 870 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 PPP2R5DQ14738 602 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 VWA3BQ502W6 1294 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 EAPPQ56P03 285 aaPredicted RBP12.59□□□□□ -0.39
RPAP1-204ENST00000562303 SUPT20HQ8NEM7 779 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 GABPB2Q8TAK5 448 aaPredicted RBP12.59□□□□□ -0.39
RPAP1-204ENST00000562303 RHOXF2Q9BQY4 288 aa12.59□□□□□ -0.39
RPAP1-204ENST00000562303 CDCA7Q9BWT1 371 aaPredicted RBP12.59□□□□□ -0.39
RPAP1-204ENST00000562303 TUBB4AP04350 444 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 CCDC26Q8TAB7 109 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms