RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	ARID4A	P29374	1257 aa	Predicted RBP	9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	CHRND	Q07001	517 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	SCARF1	Q14162	830 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	TNIP1	Q15025	636 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	RABEP1	Q15276	862 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	FBXO46	Q6PJ61	603 aa	Predicted RBP	9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	RASAL3	Q86YV0	1011 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	MICALL2	Q8IY33	904 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	SUPT20H	Q8NEM7	779 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	CELF1	Q92879	486 aa	Known RBP	9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	IL17RA	Q96F46	866 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	FAM227B	Q96M60	508 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	TBC1D2	Q9BYX2	928 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	BRCA2	P51587	3418 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	MYH13	Q9UKX3	1938 aa		9.05	□□□□□ -0.96
TPM1-231	ENST00000561395	TAF5L	O75529	589 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	UQCRFS1P1	P0C7P4	283 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	MCAM	P43121	646 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	PHKA1	P46020	1223 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	ANAPC15	P60006	121 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	RPS8	P62241	208 aa	Known RBP	9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	CCDC102B	Q68D86	513 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	SAMD7	Q7Z3H4	446 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	SNX21	Q969T3	373 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	RTFDC1	Q9BY42	306 aa	Predicted RBP	9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	DAXX	Q9UER7	740 aa	Predicted RBP	9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	MINPP1	Q9UNW1	487 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	ATP6V0A2	Q9Y487	856 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	CCDC171	Q6TFL3	1326 aa		9.04	□□□□□ -0.96
TPM1-231	ENST00000561395	CUL9	Q8IWT3	2517 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	YDJC	A8MPS7	323 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	SNAP23	O00161	211 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	TBC1D8	O95759	1140 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	EGFR	P00533	1210 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	HSPA4	P34932	840 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	ZAP70	P43403	619 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	SLC4A3	P48751	1232 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	KIAA2012	Q0VF49	1180 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	GRAP	Q13588	217 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	UBE4A	Q14139	1066 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	DPP8	Q6V1X1	898 aa	Predicted RBP	9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	KIAA1211	Q6ZU35	1233 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	HSCB	Q8IWL3	235 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	GRAPL	Q8TC17	118 aa	Predicted RBP	9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	DCPS	Q96C86	337 aa	Known RBP	9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	ANTXR1	Q9H6X2	564 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	ZNF804B	A4D1E1	1349 aa		9.03	□□□□□ -0.96
TPM1-231	ENST00000561395	DLL1	O00548	723 aa		9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	RNF113A	O15541	343 aa	Known RBP	9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	PTH1R	Q03431	593 aa		9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	LRRFIP1	Q32MZ4	808 aa	Known RBP	9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	TPRN	Q4KMQ1	711 aa		9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	ZMYM1	Q5SVZ6	1142 aa		9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	PI16	Q6UXB8	463 aa		9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	ZNF589	Q86UQ0	364 aa	Predicted RBP	9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	ANKRD2	Q9GZV1	360 aa		9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	PALD1	Q9ULE6	856 aa		9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	ZNF646	O15015	1829 aa	Predicted RBP	9.02	□□□□□ -0.97
TPM1-231	ENST00000561395	MAST2	Q6P0Q8	1798 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	POTEF	A5A3E0	1075 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	GPR25	O00155	361 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	CD2BP2	O95400	341 aa	Known RBP	9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	CHGB	P05060	677 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	CYP2E1	P05181	493 aa	Predicted RBP	9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	ZFY	P08048	801 aa	Predicted RBP	9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	RASGRF1	Q13972	1273 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	TTF1	Q15361	905 aa	Predicted RBP	9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	MCMDC2	Q4G0Z9	681 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	ERICH6	Q7L0X2	663 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	SULF1	Q8IWU6	871 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	MPND	Q8N594	471 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	DPF2	Q92785	391 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	MAP4K1	Q92918	833 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	KCNB2	Q92953	911 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	CDCA5	Q96FF9	252 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	HELLS	Q9NRZ9	838 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	GGA3	Q9NZ52	723 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	HMG20B	Q9P0W2	317 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	COL1A1	P02452	1464 aa	Predicted RBP	9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	MAST3	O60307	1309 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	ECM29	Q5VYK3	1845 aa		9.01	□□□□□ -0.97
TPM1-231	ENST00000561395	PSMD14	O00487	310 aa		9	□□□□□ -0.97
TPM1-231	ENST00000561395	BCAM	P50895	628 aa		9	□□□□□ -0.97
TPM1-231	ENST00000561395	KIF4B	Q2VIQ3	1234 aa		9	□□□□□ -0.97
TPM1-231	ENST00000561395	NOM1	Q5C9Z4	860 aa	Known RBP	9	□□□□□ -0.97
TPM1-231	ENST00000561395	RBM26	Q5T8P6	1007 aa	Known RBP	9	□□□□□ -0.97
TPM1-231	ENST00000561395	ZSCAN25	Q6NSZ9	544 aa		9	□□□□□ -0.97
TPM1-231	ENST00000561395	CCDC129	Q6ZRS4	1044 aa		9	□□□□□ -0.97
TPM1-231	ENST00000561395	SPATA5	Q8NB90	893 aa		9	□□□□□ -0.97
TPM1-231	ENST00000561395	SEC62	Q99442	399 aa	Known RBP	9	□□□□□ -0.97
TPM1-231	ENST00000561395	PIH1D3	Q9NQM4	214 aa	Known RBP	9	□□□□□ -0.97
TPM1-231	ENST00000561395	COLQ	Q9Y215	455 aa	Predicted RBP	9	□□□□□ -0.97
TPM1-231	ENST00000561395	RBM8A	Q9Y5S9	174 aa	Known RBP	9	□□□□□ -0.97
TPM1-231	ENST00000561395	SNX14	Q9Y5W7	946 aa		9	□□□□□ -0.97
TPM1-231	ENST00000561395	COL6A3	P12111	3177 aa		9	□□□□□ -0.97
TPM1-231	ENST00000561395	LAMA4	Q16363	1823 aa		9	□□□□□ -0.97
TPM1-231	ENST00000561395	IRS2	Q9Y4H2	1338 aa		9	□□□□□ -0.97
TPM1-231	ENST00000561395	WTIP	A6NIX2	430 aa	Predicted RBP	8.99	□□□□□ -0.97
TPM1-231	ENST00000561395		K7ELQ4	463 aa	Predicted RBP	8.99	□□□□□ -0.97

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