RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 CYP26A1O43174 497 aa9.25□□□□□ -0.93
HMBOX1-216ENST00000561377 XRCC5P13010 732 aaKnown RBP9.25□□□□□ -0.93
HMBOX1-216ENST00000561377 FCGRTP55899 365 aa9.25□□□□□ -0.93
HMBOX1-216ENST00000561377 CYP27A1Q02318 531 aa9.25□□□□□ -0.93
HMBOX1-216ENST00000561377 PPP2R3AQ06190 1150 aa9.25□□□□□ -0.93
HMBOX1-216ENST00000561377 FAAP100Q0VG06 881 aa9.25□□□□□ -0.93
HMBOX1-216ENST00000561377 MSMPQ1L6U9 139 aa9.25□□□□□ -0.93
HMBOX1-216ENST00000561377 DUSP27Q5VZP5 1158 aa9.25□□□□□ -0.93
HMBOX1-216ENST00000561377 SHISA5Q8N114 240 aa9.25□□□□□ -0.93
HMBOX1-216ENST00000561377 GPN3Q9UHW5 284 aaPredicted RBP9.25□□□□□ -0.93
HMBOX1-216ENST00000561377 MAPK1P28482 360 aa9.24□□□□□ -0.93
HMBOX1-216ENST00000561377 PLCB3Q01970 1234 aa9.24□□□□□ -0.93
HMBOX1-216ENST00000561377 GATA6Q92908 595 aa9.24□□□□□ -0.93
HMBOX1-216ENST00000561377 KRTAP9-2Q9BYQ4 174 aa9.24□□□□□ -0.93
HMBOX1-216ENST00000561377 ANGEL1Q9UNK9 670 aaKnown RBP9.24□□□□□ -0.93
HMBOX1-216ENST00000561377 FAM170BA6NMN3 283 aa9.23□□□□□ -0.93
HMBOX1-216ENST00000561377 SLFN14P0C7P3 912 aa9.23□□□□□ -0.93
HMBOX1-216ENST00000561377 LIG1P18858 919 aa9.23□□□□□ -0.93
HMBOX1-216ENST00000561377 BCO2Q9BYV7 579 aa9.23□□□□□ -0.93
HMBOX1-216ENST00000561377 CCDC86Q9H6F5 360 aaKnown RBP9.23□□□□□ -0.93
HMBOX1-216ENST00000561377 KRT82Q9NSB4 513 aa9.23□□□□□ -0.93
HMBOX1-216ENST00000561377 TMEM39AQ9NV64 488 aa9.23□□□□□ -0.93
HMBOX1-216ENST00000561377 PNMA6FA0A0J9YX94 578 aa9.22□□□□□ -0.93
HMBOX1-216ENST00000561377 TMPRSS2O15393 492 aa9.22□□□□□ -0.93
HMBOX1-216ENST00000561377 PAX4O43316 350 aa9.22□□□□□ -0.93
HMBOX1-216ENST00000561377 GSTP1P09211 210 aaKnown RBP9.22□□□□□ -0.93
HMBOX1-216ENST00000561377 DSC3Q14574 896 aa9.22□□□□□ -0.93
HMBOX1-216ENST00000561377 PI16Q6UXB8 463 aa9.22□□□□□ -0.93
HMBOX1-216ENST00000561377 ZC3H12CQ9C0D7 883 aaKnown RBP9.22□□□□□ -0.93
HMBOX1-216ENST00000561377 PPP1R9AQ9ULJ8 1098 aa9.22□□□□□ -0.93
HMBOX1-216ENST00000561377 DAGLAQ9Y4D2 1042 aa9.22□□□□□ -0.93
HMBOX1-216ENST00000561377 TREHO43280 583 aa9.21□□□□□ -0.94
HMBOX1-216ENST00000561377 PRNPP04156 253 aa9.21□□□□□ -0.94
HMBOX1-216ENST00000561377 VSIG10LQ86VR7 867 aa9.21□□□□□ -0.94
HMBOX1-216ENST00000561377 ATXN3LQ9H3M9 355 aa9.21□□□□□ -0.94
HMBOX1-216ENST00000561377 PIDD1Q9HB75 910 aa9.21□□□□□ -0.94
HMBOX1-216ENST00000561377 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.2□□□□□ -0.94
HMBOX1-216ENST00000561377 TAL1P17542 331 aaPredicted RBP9.2□□□□□ -0.94
HMBOX1-216ENST00000561377 ID3Q02535 119 aa9.2□□□□□ -0.94
HMBOX1-216ENST00000561377 ENOX2Q16206 610 aaKnown RBP9.2□□□□□ -0.94
HMBOX1-216ENST00000561377 KIF4BQ2VIQ3 1234 aa9.2□□□□□ -0.94
HMBOX1-216ENST00000561377 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
HMBOX1-216ENST00000561377 SEZ6L2Q6UXD5 910 aa9.2□□□□□ -0.94
HMBOX1-216ENST00000561377 BSDC1Q9NW68 430 aaPredicted RBP9.2□□□□□ -0.94
HMBOX1-216ENST00000561377 CRIM1Q9NZV1 1036 aa9.2□□□□□ -0.94
HMBOX1-216ENST00000561377 CCDC39Q9UFE4 941 aa9.2□□□□□ -0.94
HMBOX1-216ENST00000561377 NXPE4Q6UWF7 544 aa9.19□□□□□ -0.94
HMBOX1-216ENST00000561377 ZNF765Q7L2R6 523 aa9.19□□□□□ -0.94
HMBOX1-216ENST00000561377 WDR89Q96FK6 387 aaPredicted RBP9.19□□□□□ -0.94
HMBOX1-216ENST00000561377 FBXL18Q96ME1 805 aa9.19□□□□□ -0.94
HMBOX1-216ENST00000561377 C1GALT1Q9NS00 363 aa9.19□□□□□ -0.94
HMBOX1-216ENST00000561377 AKAP2Q9Y2D5 859 aa9.19□□□□□ -0.94
HMBOX1-216ENST00000561377 ZNF862O60290 1169 aa9.18□□□□□ -0.94
HMBOX1-216ENST00000561377 ZSCAN29Q8IWY8 852 aaPredicted RBP9.18□□□□□ -0.94
HMBOX1-216ENST00000561377 KCNB2Q92953 911 aa9.18□□□□□ -0.94
HMBOX1-216ENST00000561377 FANCD2OSQ96PS1 177 aa9.18□□□□□ -0.94
HMBOX1-216ENST00000561377 LRRC4CQ9HCJ2 640 aa9.18□□□□□ -0.94
HMBOX1-216ENST00000561377 KRTAP9-6A0A140TA67 174 aa9.17□□□□□ -0.94
HMBOX1-216ENST00000561377 DYNC1LI2O43237 492 aaPredicted RBP9.17□□□□□ -0.94
HMBOX1-216ENST00000561377 OGFOD3Q6PK18 319 aa9.17□□□□□ -0.94
HMBOX1-216ENST00000561377 SULF2Q8IWU5 870 aa9.17□□□□□ -0.94
HMBOX1-216ENST00000561377 FBF1Q8TES7 1133 aa9.17□□□□□ -0.94
HMBOX1-216ENST00000561377 EMILIN2Q9BXX0 1053 aa9.17□□□□□ -0.94
HMBOX1-216ENST00000561377 LGR6Q9HBX8 967 aa9.17□□□□□ -0.94
HMBOX1-216ENST00000561377 CYP27C1Q4G0S4 372 aa9.16□□□□□ -0.94
HMBOX1-216ENST00000561377 PDZD3Q86UT5 571 aa9.16□□□□□ -0.94
HMBOX1-216ENST00000561377 SRCIN1Q9C0H9 1055 aa9.16□□□□□ -0.94
HMBOX1-216ENST00000561377 ADGRE2Q9UHX3 823 aa9.16□□□□□ -0.94
HMBOX1-216ENST00000561377 PCDHGC5Q9Y5F6 944 aa9.16□□□□□ -0.94
HMBOX1-216ENST00000561377 NME2P22392 152 aa9.15□□□□□ -0.94
HMBOX1-216ENST00000561377 ARNTP27540 789 aa9.15□□□□□ -0.94
HMBOX1-216ENST00000561377 MAPK8P45983 427 aa9.15□□□□□ -0.94
HMBOX1-216ENST00000561377 KCNA1Q09470 495 aa9.15□□□□□ -0.94
HMBOX1-216ENST00000561377 SMYD4Q8IYR2 804 aaPredicted RBP9.15□□□□□ -0.94
HMBOX1-216ENST00000561377 ABI1Q8IZP0 508 aa9.15□□□□□ -0.94
HMBOX1-216ENST00000561377 ZC3H7BQ9UGR2 993 aaKnown RBP9.15□□□□□ -0.94
HMBOX1-216ENST00000561377 IVNS1ABPQ9Y6Y0 642 aa9.15□□□□□ -0.94
HMBOX1-216ENST00000561377 RNGTTO60942 597 aaKnown RBP9.14□□□□□ -0.95
HMBOX1-216ENST00000561377 GSTT1P30711 240 aa9.14□□□□□ -0.95
HMBOX1-216ENST00000561377 TP53INP2Q8IXH6 220 aa9.14□□□□□ -0.95
HMBOX1-216ENST00000561377 DISC1Q9NRI5 854 aa9.14□□□□□ -0.95
HMBOX1-216ENST00000561377 TXKP42681 527 aa9.13□□□□□ -0.95
HMBOX1-216ENST00000561377 FMR1Q06787 632 aaKnown RBP eCLIP9.13□□□□□ -0.95
HMBOX1-216ENST00000561377 TTLL4Q14679 1199 aa9.13□□□□□ -0.95
HMBOX1-216ENST00000561377 FLCNQ8NFG4 579 aa9.13□□□□□ -0.95
HMBOX1-216ENST00000561377 ASB16Q96NS5 453 aa9.13□□□□□ -0.95
HMBOX1-216ENST00000561377 SAMM50Q9Y512 469 aa9.13□□□□□ -0.95
HMBOX1-216ENST00000561377 GIPC1O14908 333 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 ATP2B2Q01814 1243 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 MAP1SQ66K74 1059 aaPredicted RBP9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 ALG1LQ6GMV1 187 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 AGBL5Q8NDL9 886 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 C3orf58Q8NDZ4 430 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 STK35Q8TDR2 534 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 FMNL2Q96PY5 1086 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 CEP44Q9C0F1 390 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 CBX8Q9HC52 389 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 PCOLCE2Q9UKZ9 415 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 PPM1HQ9ULR3 514 aa9.12□□□□□ -0.95
HMBOX1-216ENST00000561377 FAM87AP0C7U9 286 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms