RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 ZSCAN25Q6NSZ9 544 aa12.44□□□□□ -0.42
LRRC28-221ENST00000561276 APOBEC3HQ6NTF7 200 aaKnown RBP12.44□□□□□ -0.42
LRRC28-221ENST00000561276 CNTROBQ8N137 903 aa12.44□□□□□ -0.42
LRRC28-221ENST00000561276 FSD1Q9BTV5 496 aa12.44□□□□□ -0.42
LRRC28-221ENST00000561276 TDRD3Q9H7E2 651 aaKnown RBP12.44□□□□□ -0.42
LRRC28-221ENST00000561276 CLEC11AQ9Y240 323 aa12.44□□□□□ -0.42
LRRC28-221ENST00000561276 DAGLAQ9Y4D2 1042 aa12.44□□□□□ -0.42
LRRC28-221ENST00000561276 MROH7-TTC4A0A0A0MT08 1334 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 ZNF532Q9HCE3 1301 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 CDK5RAP2Q96SN8 1893 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 KIF3CO14782 793 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 RNF113AO15541 343 aaKnown RBP12.43□□□□□ -0.42
LRRC28-221ENST00000561276 MYO1BO43795 1136 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 CHGBP05060 677 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 GSPT1P15170 499 aaKnown RBP12.43□□□□□ -0.42
LRRC28-221ENST00000561276 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
LRRC28-221ENST00000561276 ADGRA1Q86SQ6 560 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 PGAP2Q9UHJ9 254 aa12.43□□□□□ -0.42
LRRC28-221ENST00000561276 GAKO14976 1311 aa12.42□□□□□ -0.42
LRRC28-221ENST00000561276 ASTN2O75129 1339 aaPredicted RBP12.42□□□□□ -0.42
LRRC28-221ENST00000561276 TCRBV5S4A2TA0A5A2 114 aa12.42□□□□□ -0.42
LRRC28-221ENST00000561276 SDSP20132 328 aa12.42□□□□□ -0.42
LRRC28-221ENST00000561276 ADD2P35612 726 aa12.42□□□□□ -0.42
LRRC28-221ENST00000561276 UBE3CQ15386 1083 aa12.42□□□□□ -0.42
LRRC28-221ENST00000561276 LRRFIP1Q32MZ4 808 aaKnown RBP12.42□□□□□ -0.42
LRRC28-221ENST00000561276 CDC42EP5Q6NZY7 148 aa12.42□□□□□ -0.42
LRRC28-221ENST00000561276 ZC3H15Q8WU90 426 aaKnown RBP12.42□□□□□ -0.42
LRRC28-221ENST00000561276 NOL10Q9BSC4 688 aaKnown RBP12.42□□□□□ -0.42
LRRC28-221ENST00000561276 USP40Q9NVE5 1235 aa12.42□□□□□ -0.42
LRRC28-221ENST00000561276 AATFQ9NY61 560 aaKnown RBP eCLIP12.42□□□□□ -0.42
LRRC28-221ENST00000561276 ZNF70Q9UC06 446 aaPredicted RBP12.42□□□□□ -0.42
LRRC28-221ENST00000561276 CLRN2A0PK11 232 aa12.41□□□□□ -0.42
LRRC28-221ENST00000561276 BAG3O95817 575 aa12.41□□□□□ -0.42
LRRC28-221ENST00000561276 ZFYP08048 801 aaPredicted RBP12.41□□□□□ -0.42
LRRC28-221ENST00000561276 BTDP43251 543 aa12.41□□□□□ -0.42
LRRC28-221ENST00000561276 PPP4CP60510 307 aa12.41□□□□□ -0.42
LRRC28-221ENST00000561276 ANGEL2Q5VTE6 544 aaKnown RBP12.41□□□□□ -0.42
LRRC28-221ENST00000561276 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
LRRC28-221ENST00000561276 MIGA1Q8NAN2 632 aa12.41□□□□□ -0.42
LRRC28-221ENST00000561276 DCPSQ96C86 337 aaKnown RBP12.41□□□□□ -0.42
LRRC28-221ENST00000561276 FOCADQ5VW36 1801 aa12.4□□□□□ -0.42
LRRC28-221ENST00000561276 MAGEB6P1A0A0J9YX57 407 aa12.4□□□□□ -0.42
LRRC28-221ENST00000561276 DYNLL1P63167 89 aaKnown RBP12.4□□□□□ -0.42
LRRC28-221ENST00000561276 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.42
LRRC28-221ENST00000561276 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
LRRC28-221ENST00000561276 PUS7LQ9H0K6 701 aaKnown RBP12.4□□□□□ -0.42
LRRC28-221ENST00000561276 SCAF8Q9UPN6 1271 aaKnown RBP12.4□□□□□ -0.42
LRRC28-221ENST00000561276 PITPNM1O00562 1244 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 TOMM70O94826 608 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 PLCG2P16885 1265 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 CACNB3P54284 484 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 RHBDL3P58872 404 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 BMP2KLQ5H9B9 411 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 ZMYM1Q5SVZ6 1142 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 MAP1SQ66K74 1059 aaPredicted RBP12.39□□□□□ -0.43
LRRC28-221ENST00000561276 SH3RF3Q8TEJ3 882 aaPredicted RBP12.39□□□□□ -0.43
LRRC28-221ENST00000561276 APPBP2Q92624 585 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 OSBP2Q969R2 916 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 SEC62Q99442 399 aaKnown RBP12.39□□□□□ -0.43
LRRC28-221ENST00000561276 RIOK1Q9BRS2 568 aaKnown RBP12.39□□□□□ -0.43
LRRC28-221ENST00000561276 VEZTQ9HBM0 779 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 GGA3Q9NZ52 723 aa12.39□□□□□ -0.43
LRRC28-221ENST00000561276 PITPNM2Q9BZ72 1349 aa12.38□□□□□ -0.43
LRRC28-221ENST00000561276 TCP10L2B9ZVM9 353 aa12.38□□□□□ -0.43
LRRC28-221ENST00000561276 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
LRRC28-221ENST00000561276 CDC37L1Q7L3B6 337 aa12.38□□□□□ -0.43
LRRC28-221ENST00000561276 USP48Q86UV5 1035 aa12.38□□□□□ -0.43
LRRC28-221ENST00000561276 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
LRRC28-221ENST00000561276 AIDAQ96BJ3 306 aa12.38□□□□□ -0.43
LRRC28-221ENST00000561276 FAM227BQ96M60 508 aa12.38□□□□□ -0.43
LRRC28-221ENST00000561276 ARMT1Q9H993 441 aa12.38□□□□□ -0.43
LRRC28-221ENST00000561276 TMOD2Q9NZR1 351 aa12.38□□□□□ -0.43
LRRC28-221ENST00000561276 MYH1P12882 1939 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 HIP1O00291 1037 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 MBD4O95243 580 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 TNNI2P48788 182 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 NFIAQ12857 509 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 NMIQ13287 307 aaPredicted RBP12.37□□□□□ -0.43
LRRC28-221ENST00000561276 FKBP1CQ5VVH2 108 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 CWC27Q6UX04 472 aaKnown RBP12.37□□□□□ -0.43
LRRC28-221ENST00000561276 KRT26Q7Z3Y9 468 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 APOBEC3FQ8IUX4 373 aaKnown RBP12.37□□□□□ -0.43
LRRC28-221ENST00000561276 SULF1Q8IWU6 871 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 TEX11Q8IYF3 940 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 LCORLQ8N3X6 602 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 TGFBRAP1Q8WUH2 860 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 STRBPQ96SI9 672 aaKnown RBP12.37□□□□□ -0.43
LRRC28-221ENST00000561276 IDI2Q9BXS1 227 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 DIAPH3Q9NSV4 1193 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 FAM198AQ9UFP1 575 aa12.37□□□□□ -0.43
LRRC28-221ENST00000561276 RFX7Q2KHR2 1363 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 A0A0D9SFI3 127 aa12.36□□□□□ -0.43
LRRC28-221ENST00000561276 M0R2C6 588 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms