RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 FCHSD1Q86WN1 690 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 OSMRQ99650 979 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 EHD4Q9H223 541 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 SLC6A14Q9UN76 642 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 NRXN1Q9ULB1 1477 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 ADAMTS13Q76LX8 1427 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 PLEKHG1Q9ULL1 1385 aa8.61□□□□□ -1.03
LRRC28-220ENST00000561253 RPGRIP1LQ68CZ1 1315 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 ELOA3CA0A087WX78 387 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-220ENST00000561253 A0A1W2PP55 124 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 ELOA3DA6NLF2 546 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-220ENST00000561253 GIPC1O14908 333 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 ELOA3BQ3SY89 546 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 KIAA0319Q5VV43 1072 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 PEAR1Q5VY43 1037 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-220ENST00000561253 SLCO4C1Q6ZQN7 724 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 ANKLE2Q86XL3 938 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 CEP120Q8N960 986 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 ELOA3Q8NG57 546 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 SIN3AQ96ST3 1273 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 SUV39H2Q9H5I1 410 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 PPP4R2Q9NY27 417 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 VTI1BQ9UEU0 232 aa8.6□□□□□ -1.03
LRRC28-220ENST00000561253 NPHP4O75161 1426 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-220ENST00000561253 CLSPNQ9HAW4 1339 aa8.59□□□□□ -1.03
LRRC28-220ENST00000561253 NRXN3Q9Y4C0 1643 aa8.59□□□□□ -1.03
LRRC28-220ENST00000561253 ACPPP15309 386 aa8.59□□□□□ -1.03
LRRC28-220ENST00000561253 EIF4BP23588 611 aaKnown RBP8.59□□□□□ -1.03
LRRC28-220ENST00000561253 GMPRP36959 345 aa8.59□□□□□ -1.03
LRRC28-220ENST00000561253 MICALL1Q8N3F8 863 aa8.59□□□□□ -1.03
LRRC28-220ENST00000561253 ZNF775Q96BV0 537 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-220ENST00000561253 ZKSCAN3Q9BRR0 538 aa8.59□□□□□ -1.03
LRRC28-220ENST00000561253 BCO2Q9BYV7 579 aa8.59□□□□□ -1.03
LRRC28-220ENST00000561253 C12orf49Q9H741 205 aa8.59□□□□□ -1.03
LRRC28-220ENST00000561253 KIAA1522Q9P206 1035 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-220ENST00000561253 TRAK1Q9UPV9 953 aa8.59□□□□□ -1.03
LRRC28-220ENST00000561253 AK5Q9Y6K8 562 aa8.59□□□□□ -1.03
LRRC28-220ENST00000561253 MYOM2P54296 1465 aa8.58□□□□□ -1.04
LRRC28-220ENST00000561253 ADGRF5Q8IZF2 1346 aa8.58□□□□□ -1.04
LRRC28-220ENST00000561253 IFT172Q9UG01 1749 aa8.58□□□□□ -1.04
LRRC28-220ENST00000561253 SETBP1Q9Y6X0 1596 aa8.58□□□□□ -1.04
LRRC28-220ENST00000561253 ELMSAN1Q6PJG2 1045 aa8.58□□□□□ -1.04
LRRC28-220ENST00000561253 ACDQ96AP0 544 aa8.58□□□□□ -1.04
LRRC28-220ENST00000561253 LIN7BQ9HAP6 207 aa8.58□□□□□ -1.04
LRRC28-220ENST00000561253 DZANK1Q9NVP4 752 aa8.58□□□□□ -1.04
LRRC28-220ENST00000561253 KIF1BO60333 1816 aa8.58□□□□□ -1.04
LRRC28-220ENST00000561253 POLR1AO95602 1720 aaPredicted RBP8.57□□□□□ -1.04
LRRC28-220ENST00000561253 PIK3C2GO75747 1445 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 TRPA1O75762 1119 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 SMNDC1O75940 238 aaKnown RBP eCLIP8.57□□□□□ -1.04
LRRC28-220ENST00000561253 EPXP11678 715 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 VAMP1P23763 118 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 ATP11AP98196 1134 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 MRPL58Q14197 206 aaKnown RBP8.57□□□□□ -1.04
LRRC28-220ENST00000561253 GRM2Q14416 872 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 NXPE4Q6UWF7 544 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.57□□□□□ -1.04
LRRC28-220ENST00000561253 PLD4Q96BZ4 506 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 MDFIQ99750 246 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 PBX4Q9BYU1 374 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 OSBPL7Q9BZF2 842 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 SRCIN1Q9C0H9 1055 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 RASSF4Q9H2L5 321 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 PPLO60437 1756 aa8.57□□□□□ -1.04
LRRC28-220ENST00000561253 IQGAP1P46940 1657 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 SLURP2P0DP57 97 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 TSNAXIP1Q2TAA8 658 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 RGL3Q3MIN7 710 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 PERM1Q5SV97 790 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 CEP135Q66GS9 1140 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 PSAPL1Q6NUJ1 521 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 SMG9Q9H0W8 520 aaKnown RBP8.56□□□□□ -1.04
LRRC28-220ENST00000561253 FRRS1LQ9P0K9 344 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 FAM8A1Q9UBU6 413 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 NAGPAQ9UK23 515 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 EID1Q9Y6B2 187 aa8.56□□□□□ -1.04
LRRC28-220ENST00000561253 PRAG1Q86YV5 1406 aa8.55□□□□□ -1.04
LRRC28-220ENST00000561253 ASXL1Q8IXJ9 1541 aa8.55□□□□□ -1.04
LRRC28-220ENST00000561253 LTBP4Q8N2S1 1624 aa8.55□□□□□ -1.04
LRRC28-220ENST00000561253 SETD1AO15047 1707 aaKnown RBP8.55□□□□□ -1.04
LRRC28-220ENST00000561253 PDE2AO00408 941 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-220ENST00000561253 TREML4Q6UXN2 200 aa8.55□□□□□ -1.04
LRRC28-220ENST00000561253 CCNJLQ8IV13 435 aa8.55□□□□□ -1.04
LRRC28-220ENST00000561253 GALNT6Q8NCL4 622 aa8.55□□□□□ -1.04
LRRC28-220ENST00000561253 EDARADDQ8WWZ3 215 aa8.55□□□□□ -1.04
LRRC28-220ENST00000561253 TBX22Q9Y458 520 aa8.55□□□□□ -1.04
LRRC28-220ENST00000561253 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
LRRC28-220ENST00000561253 DIP2AQ14689 1571 aa8.54□□□□□ -1.04
LRRC28-220ENST00000561253 METP08581 1390 aa8.54□□□□□ -1.04
LRRC28-220ENST00000561253 NFKBIEO00221 500 aa8.54□□□□□ -1.04
LRRC28-220ENST00000561253 RGS9O75916 674 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-220ENST00000561253 USP17L7P0C7H9 530 aa8.54□□□□□ -1.04
LRRC28-220ENST00000561253 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
LRRC28-220ENST00000561253 TMEM102Q8N9M5 508 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-220ENST00000561253 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
LRRC28-220ENST00000561253 SLC26A8Q96RN1 970 aa8.54□□□□□ -1.04
LRRC28-220ENST00000561253 LPIN3Q9BQK8 851 aa8.54□□□□□ -1.04
LRRC28-220ENST00000561253 ZNF335Q9H4Z2 1342 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-220ENST00000561253 OIP5O43482 229 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 RECKO95980 971 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms