RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SCRN1Q12765 414 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 STX1AQ16623 288 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 ARHGAP29Q52LW3 1261 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 TTLL5Q6EMB2 1281 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 KRBA2Q6ZNG9 492 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 FERMT3Q86UX7 667 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 IQUBQ8NA54 791 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 CCDC150Q8NCX0 1101 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 GOLGA5Q8TBA6 731 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 ACSBG1Q96GR2 724 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 LLPHQ9BRT6 129 aaKnown RBP16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 OSBPL5Q9H0X9 879 aaPredicted RBP16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 SPATA31A5Q5VU36 1347 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 SPATA31A7Q8IWB4 1347 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
RABGGTA-220ENST00000560998 NRDCO43847 1150 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 PDE8BO95263 885 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 ATP6V1AP38606 617 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 MAPK8IP2Q13387 824 aaPredicted RBP16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 SYT10Q6XYQ8 523 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 PHLPP2Q6ZVD8 1323 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 PAXIP1Q6ZW49 1069 aaPredicted RBP16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 SMARCC2Q8TAQ2 1214 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 LOC102724428A0A0B4J2F2 783 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 MYO1CO00159 1063 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 SIK1P57059 783 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 SUSD4Q5VX71 490 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 LEO1Q8WVC0 666 aaPredicted RBP16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 TRERF1Q96PN7 1200 aa16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 ORC3Q9UBD5 711 aaPredicted RBP16.13■□□□□ 0.17
RABGGTA-220ENST00000560998 MYH14Q7Z406 1995 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-220ENST00000560998 A0A0G2JS52 829 aa16.12■□□□□ 0.17
RABGGTA-220ENST00000560998 APOBRQ0VD83 1088 aa16.12■□□□□ 0.17
RABGGTA-220ENST00000560998 ITPK1Q13572 414 aa16.12■□□□□ 0.17
RABGGTA-220ENST00000560998 ZSCAN26Q16670 478 aa16.12■□□□□ 0.17
RABGGTA-220ENST00000560998 NOM1Q5C9Z4 860 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-220ENST00000560998 NEK11Q8NG66 645 aa16.12■□□□□ 0.17
RABGGTA-220ENST00000560998 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.12■□□□□ 0.175e-6■■■■■ 34.6
RABGGTA-220ENST00000560998 PUS7LQ9H0K6 701 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-220ENST00000560998 MROH5Q6ZUA9 1318 aa16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 DHX16O60231 1041 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 FAM173BQ6P4H8 233 aa16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 UBXN4Q92575 508 aa16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 EXOC4Q96A65 974 aa16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 MYO5AQ9Y4I1 1855 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 DDX60Q8IY21 1712 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 ARID4AP29374 1257 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 ADD2P35612 726 aa16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 IMMTQ16891 758 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 BARGINQ6ZT62 677 aa16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 FBXL16Q8N461 479 aa16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 NSUN7Q8NE18 718 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 FBXO18Q8NFZ0 1043 aa16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 PPP1R13BQ96KQ4 1090 aa16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 UTP14AQ9BVJ6 771 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 TRMT1Q9NXH9 659 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-220ENST00000560998 ATRNO75882 1429 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 NUTM2BA6NNL0 878 aaPredicted RBP16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 NUTM2EB1AL46 878 aaPredicted RBP16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 GPAA1O43292 621 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 FGAP02671 866 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 FGFR2P21802 821 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 PHKA1P46020 1223 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 RESTQ13127 1097 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 PUM3Q15397 648 aaKnown RBP16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 ICE2Q659A1 982 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 CCDC102BQ68D86 513 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 NUTM2AQ8IVF1 878 aaPredicted RBP16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 BICD2Q8TD16 824 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 DDX11Q96FC9 970 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 PIH1D3Q9NQM4 214 aaKnown RBP16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 LAMB2P55268 1798 aa16.1■□□□□ 0.17
RABGGTA-220ENST00000560998 BECN2A8MW95 431 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 EFCAB8A8MWE9 144 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 NR1I2O75469 434 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 UQCRFS1P1P0C7P4 283 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 ARID5BQ14865 1188 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 PARP10Q53GL7 1025 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 SRLQ86TD4 932 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 LPIN2Q92539 896 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 SMARCE1Q969G3 411 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 ZNF274Q96GC6 653 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 IVLP07476 585 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 PDIA3P30101 505 aaKnown RBP16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 GTF2A1P52655 376 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 HAND2P61296 217 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 CHST3Q7LGC8 479 aa16.09■□□□□ 0.17
RABGGTA-220ENST00000560998 H3BQV1 296 aa16.08■□□□□ 0.16
RABGGTA-220ENST00000560998 OAS2P29728 719 aaKnown RBP16.08■□□□□ 0.16
RABGGTA-220ENST00000560998 EVCP57679 992 aa16.08■□□□□ 0.16
RABGGTA-220ENST00000560998 SLC9C2Q5TAH2 1124 aa16.08■□□□□ 0.16
RABGGTA-220ENST00000560998 IFFO2Q5TF58 517 aa16.08■□□□□ 0.16
RABGGTA-220ENST00000560998 E4F1Q66K89 784 aaPredicted RBP16.08■□□□□ 0.16
RABGGTA-220ENST00000560998 HELBQ8NG08 1087 aaPredicted RBP16.08■□□□□ 0.16
RABGGTA-220ENST00000560998 ANO10Q9NW15 660 aa16.08■□□□□ 0.16
RABGGTA-220ENST00000560998 MYH15Q9Y2K3 1946 aa16.08■□□□□ 0.16
RABGGTA-220ENST00000560998 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 214.3 ms