RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 HDLBPQ00341 1268 aaKnown RBP8.44□□□□□ -1.06
HMG20A-211ENST00000560867 UBASH3BQ8TF42 649 aa8.44□□□□□ -1.06
HMG20A-211ENST00000560867 CBX8Q9HC52 389 aa8.44□□□□□ -1.06
HMG20A-211ENST00000560867 DDX3YO15523 660 aaKnown RBP8.43□□□□□ -1.06
HMG20A-211ENST00000560867 SLFN14P0C7P3 912 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 GBP2P32456 591 aaPredicted RBP8.43□□□□□ -1.06
HMG20A-211ENST00000560867 RASSF7Q02833 373 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 PDE3AQ14432 1141 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 MBTPS1Q14703 1052 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 NUTM2GQ5VZR2 741 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 USP48Q86UV5 1035 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 TXNRD3Q86VQ6 643 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 ZNF654Q8IZM8 581 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 TGIF2Q9GZN2 237 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 KBTBD4Q9NVX7 518 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 TACC3Q9Y6A5 838 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 ROBO2Q9HCK4 1378 aa8.43□□□□□ -1.06
HMG20A-211ENST00000560867 WISP1O95388 367 aa8.42□□□□□ -1.06
HMG20A-211ENST00000560867 SHISA2Q6UWI4 295 aa8.42□□□□□ -1.06
HMG20A-211ENST00000560867 NT5DC4Q86YG4 428 aa8.42□□□□□ -1.06
HMG20A-211ENST00000560867 STK35Q8TDR2 534 aa8.42□□□□□ -1.06
HMG20A-211ENST00000560867 KCNB2Q92953 911 aa8.42□□□□□ -1.06
HMG20A-211ENST00000560867 GAL3ST3Q96A11 431 aa8.42□□□□□ -1.06
HMG20A-211ENST00000560867 SPATA32Q96LK8 384 aa8.42□□□□□ -1.06
HMG20A-211ENST00000560867 CCDC86Q9H6F5 360 aaKnown RBP8.42□□□□□ -1.06
HMG20A-211ENST00000560867 DDX41Q9UJV9 622 aaKnown RBP8.42□□□□□ -1.06
HMG20A-211ENST00000560867 KRBA1A5PL33 1030 aa8.41□□□□□ -1.06
HMG20A-211ENST00000560867 TFE3P19532 575 aaPredicted RBP8.41□□□□□ -1.06
HMG20A-211ENST00000560867 CAMK2GQ13555 558 aaPredicted RBP8.41□□□□□ -1.06
HMG20A-211ENST00000560867 MAP1SQ66K74 1059 aaPredicted RBP8.41□□□□□ -1.06
HMG20A-211ENST00000560867 FDX2Q6P4F2 183 aa8.41□□□□□ -1.06
HMG20A-211ENST00000560867 HIF3AQ9Y2N7 669 aa8.41□□□□□ -1.06
HMG20A-211ENST00000560867 SUPT16HQ9Y5B9 1047 aaKnown RBP8.41□□□□□ -1.06
HMG20A-211ENST00000560867 AOC2O75106 756 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 TIAF1O95411 115 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 EIF4A3P38919 411 aaKnown RBP8.4□□□□□ -1.06
HMG20A-211ENST00000560867 GSK3AP49840 483 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 MAP3K11Q16584 847 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 TMEM151AQ8N4L1 468 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 WFDC12Q8WWY7 111 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 ACSBG1Q96GR2 724 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 WDR18Q9BV38 432 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 LRRC3Q9BY71 257 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 RAD18Q9NS91 495 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 SNCAIPQ9Y6H5 919 aa8.4□□□□□ -1.06
HMG20A-211ENST00000560867 DLGAP3O95886 979 aa8.39□□□□□ -1.07
HMG20A-211ENST00000560867 CTSBP07858 339 aa8.39□□□□□ -1.07
HMG20A-211ENST00000560867 SNAP47Q5SQN1 464 aa8.39□□□□□ -1.07
HMG20A-211ENST00000560867 DZIP1LQ8IYY4 767 aaKnown RBP8.39□□□□□ -1.07
HMG20A-211ENST00000560867 GRIN3AQ8TCU5 1115 aa8.39□□□□□ -1.07
HMG20A-211ENST00000560867 GPBAR1Q8TDU6 330 aa8.39□□□□□ -1.07
HMG20A-211ENST00000560867 GATAD2BQ8WXI9 593 aa8.39□□□□□ -1.07
HMG20A-211ENST00000560867 PCDHGC5Q9Y5F6 944 aa8.39□□□□□ -1.07
HMG20A-211ENST00000560867 ZNF862O60290 1169 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 GDF11O95390 407 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 ECEL1O95672 775 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 PF4P02776 101 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 ADH5P11766 374 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 ERCC5P28715 1186 aaPredicted RBP8.38□□□□□ -1.07
HMG20A-211ENST00000560867 NOS3P29474 1203 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 ERVK-24P63145 666 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 ID3Q02535 119 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 RPL6Q02878 288 aaKnown RBP8.38□□□□□ -1.07
HMG20A-211ENST00000560867 RAD51AP2Q09MP3 1159 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 RASIP1Q5U651 963 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 CD163Q86VB7 1156 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 KIAA0825Q8IV33 1275 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 ATXN3LQ9H3M9 355 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 GSX1Q9H4S2 264 aaPredicted RBP8.38□□□□□ -1.07
HMG20A-211ENST00000560867 CCSER2Q9H7U1 834 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 COPRSQ9NQ92 184 aa8.38□□□□□ -1.07
HMG20A-211ENST00000560867 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.38□□□□□ -1.07
HMG20A-211ENST00000560867 C1QTNF9BB2RNN3 333 aa8.37□□□□□ -1.07
HMG20A-211ENST00000560867 GREM1O60565 184 aa8.37□□□□□ -1.07
HMG20A-211ENST00000560867 GARTP22102 1010 aa8.37□□□□□ -1.07
HMG20A-211ENST00000560867 CHRNA4P43681 627 aa8.37□□□□□ -1.07
HMG20A-211ENST00000560867 SOX4Q06945 474 aaPredicted RBP8.37□□□□□ -1.07
HMG20A-211ENST00000560867 MPP2Q14168 576 aa8.37□□□□□ -1.07
HMG20A-211ENST00000560867 ZC3H12AQ5D1E8 599 aaKnown RBP8.37□□□□□ -1.07
HMG20A-211ENST00000560867 FAM196AQ6ZSG2 479 aa8.37□□□□□ -1.07
HMG20A-211ENST00000560867 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.37□□□□□ -1.07
HMG20A-211ENST00000560867 HDXQ7Z353 690 aa8.37□□□□□ -1.07
HMG20A-211ENST00000560867 FAM46AQ96IP4 442 aaKnown RBP8.37□□□□□ -1.07
HMG20A-211ENST00000560867 NT5C1AQ9BXI3 368 aa8.37□□□□□ -1.07
HMG20A-211ENST00000560867 TLR6Q9Y2C9 796 aa8.37□□□□□ -1.07
HMG20A-211ENST00000560867 SART1O43290 800 aaKnown RBP8.36□□□□□ -1.07
HMG20A-211ENST00000560867 CILPO75339 1184 aa8.36□□□□□ -1.07
HMG20A-211ENST00000560867 BPNT1O95861 308 aa8.36□□□□□ -1.07
HMG20A-211ENST00000560867 SPON2Q9BUD6 331 aa8.36□□□□□ -1.07
HMG20A-211ENST00000560867 YIPF2Q9BWQ6 316 aa8.36□□□□□ -1.07
HMG20A-211ENST00000560867 CRIM1Q9NZV1 1036 aa8.36□□□□□ -1.07
HMG20A-211ENST00000560867 PCDHA4Q9UN74 947 aa8.36□□□□□ -1.07
HMG20A-211ENST00000560867 PCDHB5Q9Y5E4 795 aa8.36□□□□□ -1.07
HMG20A-211ENST00000560867 FAM221AA4D161 298 aa8.35□□□□□ -1.07
HMG20A-211ENST00000560867 TMPRSS2O15393 492 aa8.35□□□□□ -1.07
HMG20A-211ENST00000560867 GLB1P16278 677 aa8.35□□□□□ -1.07
HMG20A-211ENST00000560867 LIG1P18858 919 aa8.35□□□□□ -1.07
HMG20A-211ENST00000560867 GATA4P43694 442 aa8.35□□□□□ -1.07
HMG20A-211ENST00000560867 IREB2P48200 963 aaKnown RBP8.35□□□□□ -1.07
HMG20A-211ENST00000560867 GNL2Q13823 731 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms