RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 USP17L1Q7RTZ2 530 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 DNAJC2Q99543 621 aaKnown RBP8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 MXD3Q9BW11 206 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 BOLA2Q9H3K6 86 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 PIH1D3Q9NQM4 214 aaKnown RBP8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 SNRKQ9NRH2 765 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 GNL3LQ9NVN8 582 aaKnown RBP8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 RFX7Q2KHR2 1363 aa8.57□□□□□ -1.04
CTDSPL2-210ENST00000560834 TULP1O00294 542 aaPredicted RBP8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 ERC2O15083 957 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 FRAT2O75474 233 aaPredicted RBP8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 VIL1P09327 827 aaKnown RBP8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 PRDX5P30044 214 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 RGS3P49796 1198 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 MFSD10Q14728 455 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 MFSD14BQ5SR56 506 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 CIAPIN1Q6FI81 312 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 RSBN1LQ6PCB5 846 aaPredicted RBP8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 WDR66Q8TBY9 1149 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 ZNF384Q8TF68 577 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 FBXW7Q969H0 707 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 GMLQ99445 158 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 PAG1Q9NWQ8 432 aa8.56□□□□□ -1.04
CTDSPL2-210ENST00000560834 MYO3BQ8WXR4 1341 aa8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 NAV1Q8NEY1 1877 aa8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 GOLIM4O00461 696 aa8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 MAP4K4O95819 1239 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 SCNN1DP51172 638 aa8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 EIF6P56537 245 aaKnown RBP8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 TTLL5Q6EMB2 1281 aa8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 TBC1D9Q6ZT07 1266 aa8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 TBC1D22AQ8WUA7 517 aa8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 CRISPLD2Q9H0B8 497 aa8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 LAMB1P07942 1786 aa8.55□□□□□ -1.04
CTDSPL2-210ENST00000560834 SHTN1A0MZ66 631 aa8.54□□□□□ -1.04
CTDSPL2-210ENST00000560834 DDNO94850 711 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-210ENST00000560834 CHGBP05060 677 aa8.54□□□□□ -1.04
CTDSPL2-210ENST00000560834 GMPSP49915 693 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-210ENST00000560834 TNIP1Q15025 636 aa8.54□□□□□ -1.04
CTDSPL2-210ENST00000560834 GPC2Q8N158 579 aa8.54□□□□□ -1.04
CTDSPL2-210ENST00000560834 ZGPATQ8N5A5 531 aaKnown RBP8.54□□□□□ -1.04
CTDSPL2-210ENST00000560834 KBTBD3Q8NAB2 608 aa8.54□□□□□ -1.04
CTDSPL2-210ENST00000560834 SUGT1Q9Y2Z0 365 aa8.54□□□□□ -1.04
CTDSPL2-210ENST00000560834 LAMA4Q16363 1823 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 TCRBV5S4A2TA0A5A2 114 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 LDHBP07195 334 aaKnown RBP8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 SDSP20132 328 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 RPS12P25398 132 aaKnown RBP8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 IRX5P78411 483 aaPredicted RBP8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 MECOMQ03112 1051 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 TTF1Q15361 905 aaPredicted RBP8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 BMP2KLQ5H9B9 411 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 KIAA0825Q8IV33 1275 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 AGBL3Q8NEM8 1001 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 NSUN4Q96CB9 384 aaKnown RBP8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 EVI5LQ96CN4 794 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 L3MBTL3Q96JM7 780 aaPredicted RBP8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 ABCF2Q9UG63 623 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 GJA3Q9Y6H8 435 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 MROH7-TTC4A0A0A0MT08 1334 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 GAKO14976 1311 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 MAST3O60307 1309 aa8.53□□□□□ -1.04
CTDSPL2-210ENST00000560834 SIPA1L1O43166 1804 aa8.52□□□□□ -1.04
CTDSPL2-210ENST00000560834 GLTPD2A6NH11 291 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 TRIM6-TRIM34B2RNG4 842 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 F8W031 263 aaPredicted RBP8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 IGSF3O75054 1194 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 IDH1O75874 414 aaKnown RBP8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 PDE6AP16499 860 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 ADD2P35612 726 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 ZNF280AP59817 542 aaPredicted RBP8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 DIXDC1Q155Q3 683 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 SLFNL1Q499Z3 407 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 ERICH6Q7L0X2 663 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 ADGRA1Q86SQ6 560 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 DZIP1Q86YF9 867 aaKnown RBP8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 MICALL2Q8IY33 904 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 CNTROBQ8N137 903 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 DPF2Q92785 391 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 FSD1Q9BTV5 496 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 GPRC5DQ9NZD1 345 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 LRP2BPQ9P2M1 347 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 TTF2Q9UNY4 1162 aaKnown RBP8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 ARIH1Q9Y4X5 557 aaPredicted RBP8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 PCDHAC2Q9Y5I4 1007 aa8.52□□□□□ -1.05
CTDSPL2-210ENST00000560834 POTECB2RU33 542 aa8.51□□□□□ -1.05
CTDSPL2-210ENST00000560834 EGFRP00533 1210 aa8.51□□□□□ -1.05
CTDSPL2-210ENST00000560834 MAP3K12Q12852 859 aa8.51□□□□□ -1.05
CTDSPL2-210ENST00000560834 MKRN3Q13064 507 aaKnown RBP8.51□□□□□ -1.05
CTDSPL2-210ENST00000560834 SPTY2D1Q68D10 685 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL2-210ENST00000560834 MAGEB6Q8N7X4 407 aa8.51□□□□□ -1.05
CTDSPL2-210ENST00000560834 TRPM4Q8TD43 1214 aa8.51□□□□□ -1.05
CTDSPL2-210ENST00000560834 RILPL2Q969X0 211 aa8.51□□□□□ -1.05
CTDSPL2-210ENST00000560834 ZBED3Q96IU2 234 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL2-210ENST00000560834 OCEL1Q9H607 264 aa8.51□□□□□ -1.05
CTDSPL2-210ENST00000560834 RAI14Q9P0K7 980 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms