RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 USP50Q70EL3 339 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-219ENST00000560483 NKX2-3Q8TAU0 364 aa9.89□□□□□ -0.83
LRRC28-219ENST00000560483 NEUROD6Q96NK8 337 aa9.89□□□□□ -0.83
LRRC28-219ENST00000560483 MXD3Q9BW11 206 aa9.89□□□□□ -0.83
LRRC28-219ENST00000560483 CDHR5Q9HBB8 845 aa9.89□□□□□ -0.83
LRRC28-219ENST00000560483 HDAC9Q9UKV0 1011 aa9.89□□□□□ -0.83
LRRC28-219ENST00000560483 A0A1B0GUL6 1792 aa9.88□□□□□ -0.83
LRRC28-219ENST00000560483 SCN9AQ15858 1988 aa9.88□□□□□ -0.83
LRRC28-219ENST00000560483 SHTN1A0MZ66 631 aa9.88□□□□□ -0.83
LRRC28-219ENST00000560483 APBB1O00213 710 aa9.88□□□□□ -0.83
LRRC28-219ENST00000560483 USP17L8P0C7I0 530 aa9.88□□□□□ -0.83
LRRC28-219ENST00000560483 RFX5P48382 616 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-219ENST00000560483 KIF4BQ2VIQ3 1234 aa9.88□□□□□ -0.83
LRRC28-219ENST00000560483 KIAA0825Q8IV33 1275 aa9.88□□□□□ -0.83
LRRC28-219ENST00000560483 AGBL3Q8NEM8 1001 aa9.88□□□□□ -0.83
LRRC28-219ENST00000560483 ZNF408Q9H9D4 720 aa9.88□□□□□ -0.83
LRRC28-219ENST00000560483 GNL3LQ9NVN8 582 aaKnown RBP9.88□□□□□ -0.83
LRRC28-219ENST00000560483 MYO3BQ8WXR4 1341 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 PNMA6EA0A0J9YXQ4 647 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 ZBTB7BO15156 539 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-219ENST00000560483 CIAO1O76071 339 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 VIL1P09327 827 aaKnown RBP9.87□□□□□ -0.83
LRRC28-219ENST00000560483 HSPA6P17066 643 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 PPP4CP60510 307 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 C20orf194Q5TEA3 1177 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 STRIP1Q5VSL9 837 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 PAXIP1Q6ZW49 1069 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-219ENST00000560483 CNTROBQ8N137 903 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 TRPM4Q8TD43 1214 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 LPIN2Q92539 896 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 DPF2Q92785 391 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 DCPSQ96C86 337 aaKnown RBP9.87□□□□□ -0.83
LRRC28-219ENST00000560483 COPRSQ9NQ92 184 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 AKAP2Q9Y2D5 859 aa9.87□□□□□ -0.83
LRRC28-219ENST00000560483 HMMRO75330 724 aa9.86□□□□□ -0.83
LRRC28-219ENST00000560483 APLP1P51693 650 aa9.86□□□□□ -0.83
LRRC28-219ENST00000560483 ATP8B2P98198 1209 aa9.86□□□□□ -0.83
LRRC28-219ENST00000560483 TFCP2Q12800 502 aa9.86□□□□□ -0.83
LRRC28-219ENST00000560483 PDE3AQ14432 1141 aa9.86□□□□□ -0.83
LRRC28-219ENST00000560483 MFSD14BQ5SR56 506 aa9.86□□□□□ -0.83
LRRC28-219ENST00000560483 ATG9AQ7Z3C6 839 aa9.86□□□□□ -0.83
LRRC28-219ENST00000560483 FAM84BQ96KN1 310 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-219ENST00000560483 MYOZ2Q9NPC6 264 aa9.86□□□□□ -0.83
LRRC28-219ENST00000560483 MYH13Q9UKX3 1938 aa9.86□□□□□ -0.83
LRRC28-219ENST00000560483 RRP1P56182 461 aaKnown RBP9.85□□□□□ -0.83
LRRC28-219ENST00000560483 HTRA3P83110 453 aa9.85□□□□□ -0.83
LRRC28-219ENST00000560483 DACT2Q5SW24 774 aa9.85□□□□□ -0.83
LRRC28-219ENST00000560483 ABT1Q9ULW3 272 aaKnown RBP9.85□□□□□ -0.83
LRRC28-219ENST00000560483 PSME4Q14997 1843 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 A0A1B0GUL7 405 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 MYO1BO43795 1136 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 SASH1O94885 1247 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 IL1R1P14778 569 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 TIMM10P62072 90 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 GRM1Q13255 1194 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 MTX1Q13505 466 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 SCARF1Q14162 830 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 DLGAP5Q15398 846 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 CEP85Q6P2H3 762 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 C15orf52Q6ZUT6 534 aaKnown RBP9.84□□□□□ -0.83
LRRC28-219ENST00000560483 KRT26Q7Z3Y9 468 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 USP48Q86UV5 1035 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 PACS2Q86VP3 889 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 SULF1Q8IWU6 871 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 VGLL2Q8N8G2 317 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 GLIS2Q9BZE0 524 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-219ENST00000560483 GGA3Q9NZ52 723 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 TTF2Q9UNY4 1162 aaKnown RBP9.84□□□□□ -0.83
LRRC28-219ENST00000560483 EXOC6BQ9Y2D4 811 aa9.84□□□□□ -0.83
LRRC28-219ENST00000560483 POLR2AP24928 1970 aaKnown RBP9.83□□□□□ -0.84
LRRC28-219ENST00000560483 TRAF5O00463 557 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 NRG2O14511 850 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-219ENST00000560483 EGFRP00533 1210 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 ADORA1P30542 326 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 TTLL12Q14166 644 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-219ENST00000560483 LAPTM4AQ15012 233 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 HSP90AB4PQ58FF6 505 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 TTC39AQ5SRH9 613 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 ANGEL2Q5VTE6 544 aaKnown RBP9.83□□□□□ -0.84
LRRC28-219ENST00000560483 CDC37L1Q7L3B6 337 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 FBXO33Q7Z6M2 555 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 TDRD7Q8NHU6 1098 aaKnown RBP9.83□□□□□ -0.84
LRRC28-219ENST00000560483 SSH3Q8TE77 659 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 TBC1D22AQ8WUA7 517 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 XAGE2Q96GT9 111 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 VEZTQ9HBM0 779 aa9.83□□□□□ -0.84
LRRC28-219ENST00000560483 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-219ENST00000560483 TMEM88BA6NKF7 163 aa9.82□□□□□ -0.84
LRRC28-219ENST00000560483 CELF2O95319 508 aaKnown RBP9.82□□□□□ -0.84
LRRC28-219ENST00000560483 FGFR2P21802 821 aa9.82□□□□□ -0.84
LRRC28-219ENST00000560483 PHKA1P46020 1223 aa9.82□□□□□ -0.84
LRRC28-219ENST00000560483 HIRAP54198 1017 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-219ENST00000560483 PRSS12P56730 875 aa9.82□□□□□ -0.84
LRRC28-219ENST00000560483 NBPF9Q3BBW0 867 aa9.82□□□□□ -0.84
LRRC28-219ENST00000560483 CFAP100Q494V2 611 aa9.82□□□□□ -0.84
LRRC28-219ENST00000560483 CCDC158Q5M9N0 1113 aa9.82□□□□□ -0.84
LRRC28-219ENST00000560483 ERC1Q8IUD2 1116 aa9.82□□□□□ -0.84
LRRC28-219ENST00000560483 RPAP2Q8IXW5 612 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-219ENST00000560483 WDR66Q8TBY9 1149 aa9.82□□□□□ -0.84
LRRC28-219ENST00000560483 ZC3H15Q8WU90 426 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms