RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 ACSBG1Q96GR2 724 aa7.89□□□□□ -1.15
CLPX-206ENST00000560166 LGR6Q9HBX8 967 aa7.89□□□□□ -1.15
CLPX-206ENST00000560166 SMC4Q9NTJ3 1288 aa7.89□□□□□ -1.15
CLPX-206ENST00000560166 NSFL1CQ9UNZ2 370 aaKnown RBP7.89□□□□□ -1.15
CLPX-206ENST00000560166 MTMR7Q9Y216 660 aa7.89□□□□□ -1.15
CLPX-206ENST00000560166 USP17L3A6NCW0 530 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 USP17L4A6NCW7 530 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 BTBD11A6QL63 1104 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 H7C1W4 665 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 EXOC5O00471 708 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 LILRA1O75019 489 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 MX2P20592 715 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 ADD1P35611 737 aaKnown RBP7.88□□□□□ -1.15
CLPX-206ENST00000560166 EIF4A1P60842 406 aaKnown RBP7.88□□□□□ -1.15
CLPX-206ENST00000560166 ZNF827Q17R98 1081 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 ZKSCAN2Q63HK3 967 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 USP17L2Q6R6M4 530 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 USP17L1Q7RTZ2 530 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 PRICKLE2Q7Z3G6 844 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 DEPDC4Q8N2C3 294 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 TSPYL6Q8N831 410 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 RGS22Q8NE09 1264 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 SSH1Q8WYL5 1049 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 GTPBP3Q969Y2 492 aaKnown RBP7.88□□□□□ -1.15
CLPX-206ENST00000560166 ARHGAP9Q9BRR9 750 aa7.88□□□□□ -1.15
CLPX-206ENST00000560166 KDM3BQ7LBC6 1761 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 PTPRCP08575 1304 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 USP17L5A8MUK1 530 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 BCAR3O75815 825 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 RHOQP17081 205 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 CABP4P57796 275 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 CCDC30Q5VVM6 783 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 ZNF790Q6PG37 636 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 ATF7IPQ6VMQ6 1270 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 NFATC2IPQ8NCF5 419 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 TRERF1Q96PN7 1200 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 TMPRSS4Q9NRS4 437 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 IVNS1ABPQ9Y6Y0 642 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 WNK3Q9BYP7 1800 aa7.87□□□□□ -1.15
CLPX-206ENST00000560166 C1QTNF9BB2RNN3 333 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 SHISA8B8ZZ34 492 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 CANXP27824 592 aaKnown RBP7.86□□□□□ -1.15
CLPX-206ENST00000560166 PTK2Q05397 1052 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 RIPOR1Q6ZS17 1223 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 STK31Q9BXU1 1019 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 OXCT2Q9BYC2 517 aaPredicted RBP7.86□□□□□ -1.15
CLPX-206ENST00000560166 API5Q9BZZ5 524 aaKnown RBP7.86□□□□□ -1.15
CLPX-206ENST00000560166 CHMP4BQ9H444 224 aaKnown RBP7.86□□□□□ -1.15
CLPX-206ENST00000560166 PPP4R2Q9NY27 417 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 WWC3Q9ULE0 1092 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 ZMIZ1Q9ULJ6 1067 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 NOVA2Q9UNW9 492 aaKnown RBP7.86□□□□□ -1.15
CLPX-206ENST00000560166 DYRK1BQ9Y463 629 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 PCDHB9Q9Y5E1 797 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 SIPA1L3O60292 1781 aaPredicted RBP7.86□□□□□ -1.15
CLPX-206ENST00000560166 SCN11AQ9UI33 1791 aa7.86□□□□□ -1.15
CLPX-206ENST00000560166 IBTKQ9P2D0 1353 aaPredicted RBP7.85□□□□□ -1.15
CLPX-206ENST00000560166 SLFNL1Q499Z3 407 aa7.85□□□□□ -1.15
CLPX-206ENST00000560166 LINC00114Q6XXX2 140 aa7.85□□□□□ -1.15
CLPX-206ENST00000560166 DZIP1LQ8IYY4 767 aaKnown RBP7.85□□□□□ -1.15
CLPX-206ENST00000560166 TTC5Q8N0Z6 440 aa7.85□□□□□ -1.15
CLPX-206ENST00000560166 DDX54Q8TDD1 881 aaKnown RBP7.85□□□□□ -1.15
CLPX-206ENST00000560166 STK32AQ8WU08 396 aa7.85□□□□□ -1.15
CLPX-206ENST00000560166 FMNL2Q96PY5 1086 aa7.85□□□□□ -1.15
CLPX-206ENST00000560166 TMOD3Q9NYL9 352 aa7.85□□□□□ -1.15
CLPX-206ENST00000560166 TFCP2L1Q9NZI6 479 aa7.85□□□□□ -1.15
CLPX-206ENST00000560166 CEP126Q9P2H0 1117 aa7.85□□□□□ -1.15
CLPX-206ENST00000560166 ABCC4O15439 1325 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 SNRPA1P09661 255 aaKnown RBP7.84□□□□□ -1.15
CLPX-206ENST00000560166 TRIM27P14373 513 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 MAP2K3P46734 347 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 ELOAQ14241 798 aaKnown RBP7.84□□□□□ -1.15
CLPX-206ENST00000560166 KRT24Q2M2I5 525 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 TMEM164Q5U3C3 297 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 ZBTB33Q86T24 672 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 CD163Q86VB7 1156 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 PLEKHM2Q8IWE5 1019 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 FTSJ3Q8IY81 847 aaKnown RBP7.84□□□□□ -1.15
CLPX-206ENST00000560166 FOXD4L4Q8WXT5 416 aaPredicted RBP7.84□□□□□ -1.15
CLPX-206ENST00000560166 OCSTAMPQ9BR26 566 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 TEX13AQ9BXU3 409 aaPredicted RBP7.84□□□□□ -1.15
CLPX-206ENST00000560166 MIS18AQ9NYP9 233 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 DBF4Q9UBU7 674 aaPredicted RBP7.84□□□□□ -1.15
CLPX-206ENST00000560166 MKRN1Q9UHC7 482 aaKnown RBP7.84□□□□□ -1.15
CLPX-206ENST00000560166 GPSM3Q9Y4H4 160 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 PAPPAQ13219 1627 aa7.84□□□□□ -1.15
CLPX-206ENST00000560166 ADCY9O60503 1353 aa7.84□□□□□ -1.16
CLPX-206ENST00000560166 PNPLA7Q6ZV29 1317 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 PXDNLA1KZ92 1463 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 ELL2O00472 640 aaPredicted RBP7.83□□□□□ -1.16
CLPX-206ENST00000560166 PLIN1O60240 522 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 HOXB4P17483 251 aaPredicted RBP7.83□□□□□ -1.16
CLPX-206ENST00000560166 HTRA3P83110 453 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 NCOA4Q13772 614 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 MVPQ14764 893 aaKnown RBP7.83□□□□□ -1.16
CLPX-206ENST00000560166 ZMYM1Q5SVZ6 1142 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 MSL1Q68DK7 614 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 C1orf229Q6ZS94 237 aaPredicted RBP7.83□□□□□ -1.16
CLPX-206ENST00000560166 RNF135Q8IUD6 432 aa7.83□□□□□ -1.16
CLPX-206ENST00000560166 DNAJC5GQ8N7S2 189 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms