RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 SPRED2Q7Z698 418 aa8.64□□□□□ -1.03
CRNDE-208ENST00000560029 SNX29Q8TEQ0 813 aa8.64□□□□□ -1.03
CRNDE-208ENST00000560029 KRTAP4-9Q9BYQ8 210 aa8.64□□□□□ -1.03
CRNDE-208ENST00000560029 PCDH1Q08174 1060 aa8.63□□□□□ -1.03
CRNDE-208ENST00000560029 BNIP3Q12983 259 aa8.63□□□□□ -1.03
CRNDE-208ENST00000560029 MAP7Q14244 749 aa8.63□□□□□ -1.03
CRNDE-208ENST00000560029 PLCL1Q15111 1095 aa8.63□□□□□ -1.03
CRNDE-208ENST00000560029 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
CRNDE-208ENST00000560029 BCL7CQ8WUZ0 217 aaPredicted RBP8.63□□□□□ -1.03
CRNDE-208ENST00000560029 RAD18Q9NS91 495 aa8.63□□□□□ -1.03
CRNDE-208ENST00000560029 AP4E1Q9UPM8 1137 aa8.63□□□□□ -1.03
CRNDE-208ENST00000560029 POU4F3Q15319 338 aa8.62□□□□□ -1.03
CRNDE-208ENST00000560029 ACSS3Q9H6R3 686 aa8.62□□□□□ -1.03
CRNDE-208ENST00000560029 C1GALT1Q9NS00 363 aa8.62□□□□□ -1.03
CRNDE-208ENST00000560029 SLC5A6Q9Y289 635 aa8.62□□□□□ -1.03
CRNDE-208ENST00000560029 AMOTL2Q9Y2J4 779 aa8.62□□□□□ -1.03
CRNDE-208ENST00000560029 DAGLAQ9Y4D2 1042 aa8.62□□□□□ -1.03
CRNDE-208ENST00000560029 A0A096LPE4 126 aa8.61□□□□□ -1.03
CRNDE-208ENST00000560029 A0A1W2PPZ6 126 aa8.61□□□□□ -1.03
CRNDE-208ENST00000560029 ASPAP45381 313 aa8.61□□□□□ -1.03
CRNDE-208ENST00000560029 GRIA4P48058 902 aa8.61□□□□□ -1.03
CRNDE-208ENST00000560029 ZNF792Q3KQV3 632 aa8.61□□□□□ -1.03
CRNDE-208ENST00000560029 LCE4AQ5TA78 99 aa8.61□□□□□ -1.03
CRNDE-208ENST00000560029 ZFYVE28Q9HCC9 887 aa8.61□□□□□ -1.03
CRNDE-208ENST00000560029 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
CRNDE-208ENST00000560029 CARMIL2Q6F5E8 1435 aa8.61□□□□□ -1.03
CRNDE-208ENST00000560029 CYP27A1Q02318 531 aa8.6□□□□□ -1.03
CRNDE-208ENST00000560029 DNAJC14Q6Y2X3 702 aaPredicted RBP8.6□□□□□ -1.03
CRNDE-208ENST00000560029 WFDC3Q8IUB2 231 aa8.6□□□□□ -1.03
CRNDE-208ENST00000560029 RBCK1Q9BYM8 510 aa8.6□□□□□ -1.03
CRNDE-208ENST00000560029 USP5P45974 858 aa8.59□□□□□ -1.03
CRNDE-208ENST00000560029 SEZ6L2Q6UXD5 910 aa8.59□□□□□ -1.03
CRNDE-208ENST00000560029 TMC7Q7Z402 723 aa8.59□□□□□ -1.03
CRNDE-208ENST00000560029 GJD3Q8N144 294 aa8.59□□□□□ -1.03
CRNDE-208ENST00000560029 CLEC4MQ9H2X3 399 aaPredicted RBP8.59□□□□□ -1.03
CRNDE-208ENST00000560029 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.58□□□□□ -1.04
CRNDE-208ENST00000560029 A0A1W2PP55 124 aa8.58□□□□□ -1.04
CRNDE-208ENST00000560029 ANKRD33BA6NCL7 494 aa8.58□□□□□ -1.04
CRNDE-208ENST00000560029 CYP11A1P05108 521 aa8.58□□□□□ -1.04
CRNDE-208ENST00000560029 OGFOD3Q6PK18 319 aa8.58□□□□□ -1.04
CRNDE-208ENST00000560029 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
CRNDE-208ENST00000560029 ASB16Q96NS5 453 aa8.58□□□□□ -1.04
CRNDE-208ENST00000560029 CITED4Q96RK1 184 aa8.58□□□□□ -1.04
CRNDE-208ENST00000560029 TRIM56Q9BRZ2 755 aaKnown RBP8.58□□□□□ -1.04
CRNDE-208ENST00000560029 CD96P40200 585 aa8.57□□□□□ -1.04
CRNDE-208ENST00000560029 PDE3BQ13370 1112 aa8.57□□□□□ -1.04
CRNDE-208ENST00000560029 CCNJLQ8IV13 435 aa8.57□□□□□ -1.04
CRNDE-208ENST00000560029 FAM181AQ8N9Y4 354 aa8.57□□□□□ -1.04
CRNDE-208ENST00000560029 FAM129BQ96TA1 746 aa8.57□□□□□ -1.04
CRNDE-208ENST00000560029 TCF12Q99081 682 aa8.57□□□□□ -1.04
CRNDE-208ENST00000560029 LIN7BQ9HAP6 207 aa8.57□□□□□ -1.04
CRNDE-208ENST00000560029 GPR182O15218 404 aa8.56□□□□□ -1.04
CRNDE-208ENST00000560029 EHHADHQ08426 723 aa8.56□□□□□ -1.04
CRNDE-208ENST00000560029 PLD6Q8N2A8 252 aaKnown RBP8.56□□□□□ -1.04
CRNDE-208ENST00000560029 CORO1BQ9BR76 489 aa8.56□□□□□ -1.04
CRNDE-208ENST00000560029 PPP1R9AQ9ULJ8 1098 aa8.56□□□□□ -1.04
CRNDE-208ENST00000560029 AOC2O75106 756 aa8.55□□□□□ -1.04
CRNDE-208ENST00000560029 IGHA2P01877 340 aa8.55□□□□□ -1.04
CRNDE-208ENST00000560029 CDK5R2Q13319 367 aa8.55□□□□□ -1.04
CRNDE-208ENST00000560029 RGS22Q8NE09 1264 aa8.55□□□□□ -1.04
CRNDE-208ENST00000560029 DMRTB1Q96MA1 342 aa8.55□□□□□ -1.04
CRNDE-208ENST00000560029 NIF3L1Q9GZT8 377 aa8.55□□□□□ -1.04
CRNDE-208ENST00000560029 CD8BP10966 210 aa8.54□□□□□ -1.04
CRNDE-208ENST00000560029 PDE3AQ14432 1141 aa8.54□□□□□ -1.04
CRNDE-208ENST00000560029 USPL1Q5W0Q7 1092 aa8.54□□□□□ -1.04
CRNDE-208ENST00000560029 ADAMTS6Q9UKP5 1117 aa8.54□□□□□ -1.04
CRNDE-208ENST00000560029 U3KQE9 123 aa8.54□□□□□ -1.04
CRNDE-208ENST00000560029 BIN1O00499 593 aa8.53□□□□□ -1.04
CRNDE-208ENST00000560029 TREHO43280 583 aa8.53□□□□□ -1.04
CRNDE-208ENST00000560029 FAM87AP0C7U9 286 aa8.53□□□□□ -1.04
CRNDE-208ENST00000560029 NPAS4Q8IUM7 802 aa8.53□□□□□ -1.04
CRNDE-208ENST00000560029 WDR18Q9BV38 432 aa8.53□□□□□ -1.04
CRNDE-208ENST00000560029 GSX1Q9H4S2 264 aaPredicted RBP8.53□□□□□ -1.04
CRNDE-208ENST00000560029 RC3H2Q9HBD1 1191 aaKnown RBP8.53□□□□□ -1.04
CRNDE-208ENST00000560029 RNASE1P07998 156 aaKnown RBP8.52□□□□□ -1.05
CRNDE-208ENST00000560029 PLCB3Q01970 1234 aa8.52□□□□□ -1.05
CRNDE-208ENST00000560029 DSC3Q14574 896 aa8.52□□□□□ -1.05
CRNDE-208ENST00000560029 FAM168AQ92567 244 aa8.52□□□□□ -1.05
CRNDE-208ENST00000560029 WDR89Q96FK6 387 aaPredicted RBP8.52□□□□□ -1.05
CRNDE-208ENST00000560029 ZC3H12CQ9C0D7 883 aaKnown RBP8.52□□□□□ -1.05
CRNDE-208ENST00000560029 MBNL3Q9NUK0 354 aaKnown RBP8.52□□□□□ -1.05
CRNDE-208ENST00000560029 DBX1A6NMT0 343 aa8.51□□□□□ -1.05
CRNDE-208ENST00000560029 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
CRNDE-208ENST00000560029 LIG1P18858 919 aa8.51□□□□□ -1.05
CRNDE-208ENST00000560029 ERCC3P19447 782 aa8.51□□□□□ -1.05
CRNDE-208ENST00000560029 ORC1Q13415 861 aa8.51□□□□□ -1.05
CRNDE-208ENST00000560029 CYP27C1Q4G0S4 372 aa8.51□□□□□ -1.05
CRNDE-208ENST00000560029 HP1BP3Q5SSJ5 553 aaPredicted RBP8.51□□□□□ -1.05
CRNDE-208ENST00000560029 GALNT12Q8IXK2 581 aa8.51□□□□□ -1.05
CRNDE-208ENST00000560029 STK11IPQ8N1F8 1099 aa8.51□□□□□ -1.05
CRNDE-208ENST00000560029 GLIS3Q8NEA6 775 aa8.51□□□□□ -1.05
CRNDE-208ENST00000560029 KRTAP4-2Q9BYR5 136 aa8.51□□□□□ -1.05
CRNDE-208ENST00000560029 FARP2O94887 1054 aaPredicted RBP8.5□□□□□ -1.05
CRNDE-208ENST00000560029 B3GALT4O96024 378 aa8.5□□□□□ -1.05
CRNDE-208ENST00000560029 P4HBP07237 508 aaKnown RBP8.5□□□□□ -1.05
CRNDE-208ENST00000560029 MAPK8P45983 427 aa8.5□□□□□ -1.05
CRNDE-208ENST00000560029 ZNF157P51786 506 aaPredicted RBP8.5□□□□□ -1.05
CRNDE-208ENST00000560029 ALKBH8Q96BT7 664 aaKnown RBP8.5□□□□□ -1.05
CRNDE-208ENST00000560029 FUT4P22083 530 aa8.49□□□□□ -1.05
CRNDE-208ENST00000560029 FMR1Q06787 632 aaKnown RBP eCLIP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms