RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 RIOK1Q9BRS2 568 aaKnown RBP12.49□□□□□ -0.41
TPM1-221ENST00000559831 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 GPR75-ASB3A0A0A6YYF3 556 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 SHTN1A0MZ66 631 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 PRKAB2O43741 272 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 GNAT2P19087 354 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 MCCP23508 829 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 RPS12P25398 132 aaKnown RBP12.48□□□□□ -0.41
TPM1-221ENST00000559831 HDLBPQ00341 1268 aaKnown RBP12.48□□□□□ -0.41
TPM1-221ENST00000559831 SDR42E1Q8WUS8 393 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
TPM1-221ENST00000559831 DSCC1Q9BVC3 393 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 C22orf23Q9BZE7 217 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 CRNKL1Q9BZJ0 848 aaKnown RBP12.48□□□□□ -0.41
TPM1-221ENST00000559831 SERPINA10Q9UK55 444 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 PCDHAC2Q9Y5I4 1007 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 RBM8AQ9Y5S9 174 aaKnown RBP12.48□□□□□ -0.41
TPM1-221ENST00000559831 LAMB1P07942 1786 aa12.48□□□□□ -0.41
TPM1-221ENST00000559831 PATL2C9JE40 543 aaKnown RBP12.47□□□□□ -0.41
TPM1-221ENST00000559831 PLCG2P16885 1265 aa12.47□□□□□ -0.41
TPM1-221ENST00000559831 USP5P45974 858 aa12.47□□□□□ -0.41
TPM1-221ENST00000559831 PPP4CP60510 307 aa12.47□□□□□ -0.41
TPM1-221ENST00000559831 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
TPM1-221ENST00000559831 TEX11Q8IYF3 940 aa12.47□□□□□ -0.41
TPM1-221ENST00000559831 GPC2Q8N158 579 aa12.47□□□□□ -0.41
TPM1-221ENST00000559831 ZDHHC15Q96MV8 337 aa12.47□□□□□ -0.41
TPM1-221ENST00000559831 MRIQ9BWK5 157 aa12.47□□□□□ -0.41
TPM1-221ENST00000559831 USP40Q9NVE5 1235 aa12.47□□□□□ -0.41
TPM1-221ENST00000559831 U3KPZ7 1027 aaPredicted RBP12.47□□□□□ -0.41
TPM1-221ENST00000559831 GOLGB1Q14789 3259 aaKnown RBP12.47□□□□□ -0.41
TPM1-221ENST00000559831 GSG1L2A8MUP6 293 aa12.46□□□□□ -0.41
TPM1-221ENST00000559831 DDNO94850 711 aaPredicted RBP12.46□□□□□ -0.41
TPM1-221ENST00000559831 TDO2P48775 406 aa12.46□□□□□ -0.41
TPM1-221ENST00000559831 DLGAP5Q15398 846 aa12.46□□□□□ -0.41
TPM1-221ENST00000559831 RBM26Q5T8P6 1007 aaKnown RBP12.46□□□□□ -0.41
TPM1-221ENST00000559831 APOBEC3HQ6NTF7 200 aaKnown RBP12.46□□□□□ -0.41
TPM1-221ENST00000559831 CERS3Q8IU89 383 aa12.46□□□□□ -0.41
TPM1-221ENST00000559831 TGFBRAP1Q8WUH2 860 aa12.46□□□□□ -0.41
TPM1-221ENST00000559831 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
TPM1-221ENST00000559831 NACAP1Q9BZK3 213 aa12.46□□□□□ -0.41
TPM1-221ENST00000559831 EPB41L4AQ9HCS5 686 aaPredicted RBP12.46□□□□□ -0.41
TPM1-221ENST00000559831 CNOT7Q9UIV1 285 aaKnown RBP12.46□□□□□ -0.41
TPM1-221ENST00000559831 FOXP2O15409 715 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 EPB41L2O43491 1005 aaKnown RBP12.45□□□□□ -0.42
TPM1-221ENST00000559831 RHBDL3P58872 404 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 PICALMQ13492 652 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 CDC42EP5Q6NZY7 148 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 MAPKAPK5Q8IW41 473 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 IFNL3Q8IZI9 196 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
TPM1-221ENST00000559831 DPF2Q92785 391 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 PRMT6Q96LA8 375 aaPredicted RBP12.45□□□□□ -0.42
TPM1-221ENST00000559831 TBC1D32Q96NH3 1257 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 NAPBQ9H115 298 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 MYOZ2Q9NPC6 264 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
TPM1-221ENST00000559831 DDX60LQ5H9U9 1706 aaKnown RBP12.45□□□□□ -0.42
TPM1-221ENST00000559831 RPAP1Q9BWH6 1393 aaPredicted RBP12.44□□□□□ -0.42
TPM1-221ENST00000559831 ZC3H4Q9UPT8 1303 aaKnown RBP12.44□□□□□ -0.42
TPM1-221ENST00000559831 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 H7C1D1 291 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 SLC27A2O14975 620 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 FGAP02671 866 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 LMOD1P29536 600 aaPredicted RBP12.44□□□□□ -0.42
TPM1-221ENST00000559831 HSPA4P34932 840 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 ZNF280AP59817 542 aaPredicted RBP12.44□□□□□ -0.42
TPM1-221ENST00000559831 HAND2P61296 217 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 TBC1D10BQ4KMP7 808 aaPredicted RBP12.44□□□□□ -0.42
TPM1-221ENST00000559831 CREB3L3Q68CJ9 461 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 TDRD3Q9H7E2 651 aaKnown RBP12.44□□□□□ -0.42
TPM1-221ENST00000559831 CTNNA3Q9UI47 895 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 PALD1Q9ULE6 856 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 MYH8P13535 1937 aa12.44□□□□□ -0.42
TPM1-221ENST00000559831 CLRN2A0PK11 232 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 MMP14P50281 582 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 CACNB3P54284 484 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 NECTIN1Q15223 517 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 ALX1Q15699 326 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 IMMTQ16891 758 aaKnown RBP12.43□□□□□ -0.42
TPM1-221ENST00000559831 KIF4BQ2VIQ3 1234 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 SLC4A8Q2Y0W8 1093 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 RNF20Q5VTR2 975 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 MTMR14Q8NCE2 650 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 DCP1AQ9NPI6 582 aaPredicted RBP12.43□□□□□ -0.42
TPM1-221ENST00000559831 ATP8A2Q9NTI2 1148 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 GPRC5DQ9NZD1 345 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 TMOD2Q9NZR1 351 aa12.43□□□□□ -0.42
TPM1-221ENST00000559831 SAP30BPQ9UHR5 308 aaKnown RBP12.43□□□□□ -0.42
TPM1-221ENST00000559831 ZMYM6O95789 1325 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 FLT1P17948 1338 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 SCN4AP35499 1836 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 POLR2AP24928 1970 aaKnown RBP12.42□□□□□ -0.42
TPM1-221ENST00000559831 MINDY4BA8MYZ0 360 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 MYO1BO43795 1136 aa12.42□□□□□ -0.42
TPM1-221ENST00000559831 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
TPM1-221ENST00000559831 EGFRP00533 1210 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms