RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 ATRNL1Q5VV63 1379 aa23.47■■□□□ 1.35
CDC42BPB-206ENST00000559790 FOCADQ5VW36 1801 aa23.47■■□□□ 1.35
CDC42BPB-206ENST00000559790 FRAT2O75474 233 aaPredicted RBP23.46■■□□□ 1.35
CDC42BPB-206ENST00000559790 SALL1Q9NSC2 1324 aa23.46■■□□□ 1.35
CDC42BPB-206ENST00000559790 SPDYE5A6NIY4 337 aa23.45■■□□□ 1.34
CDC42BPB-206ENST00000559790 TNNI2P48788 182 aa23.45■■□□□ 1.34
CDC42BPB-206ENST00000559790 MAP3K9P80192 1104 aa23.45■■□□□ 1.34
CDC42BPB-206ENST00000559790 WDR66Q8TBY9 1149 aa23.45■■□□□ 1.34
CDC42BPB-206ENST00000559790 NFIAQ12857 509 aa23.44■■□□□ 1.34
CDC42BPB-206ENST00000559790 MTX1Q13505 466 aa23.44■■□□□ 1.34
CDC42BPB-206ENST00000559790 TRIM27P14373 513 aa23.43■■□□□ 1.34
CDC42BPB-206ENST00000559790 CDC42EP5Q6NZY7 148 aa23.43■■□□□ 1.34
CDC42BPB-206ENST00000559790 FAM43AQ8N2R8 423 aa23.43■■□□□ 1.34
CDC42BPB-206ENST00000559790 CD99L2Q8TCZ2 262 aa23.43■■□□□ 1.34
CDC42BPB-206ENST00000559790 ARHGAP45Q92619 1136 aa23.43■■□□□ 1.34
CDC42BPB-206ENST00000559790 OTUD5Q96G74 571 aa23.43■■□□□ 1.34
CDC42BPB-206ENST00000559790 IL15P40933 162 aaPredicted RBP23.42■■□□□ 1.34
CDC42BPB-206ENST00000559790 ZKSCAN4Q969J2 545 aaPredicted RBP23.42■■□□□ 1.34
CDC42BPB-206ENST00000559790 CEP126Q9P2H0 1117 aa23.42■■□□□ 1.34
CDC42BPB-206ENST00000559790 FAM198AQ9UFP1 575 aa23.42■■□□□ 1.34
CDC42BPB-206ENST00000559790 RASGRF1Q13972 1273 aa23.41■■□□□ 1.34
CDC42BPB-206ENST00000559790 WRNIP1Q96S55 665 aa23.41■■□□□ 1.34
CDC42BPB-206ENST00000559790 TRIM17Q9Y577 477 aa23.41■■□□□ 1.34
CDC42BPB-206ENST00000559790 GAKO14976 1311 aa23.4■■□□□ 1.34
CDC42BPB-206ENST00000559790 CCL15-CCL14A0A0B4J2E2 113 aa23.4■■□□□ 1.34
CDC42BPB-206ENST00000559790 INPP5BP32019 993 aa23.4■■□□□ 1.34
CDC42BPB-206ENST00000559790 CCL15Q16663 113 aa23.4■■□□□ 1.34
CDC42BPB-206ENST00000559790 CCDC102BQ68D86 513 aa23.4■■□□□ 1.34
CDC42BPB-206ENST00000559790 ZNF384Q8TF68 577 aa23.4■■□□□ 1.34
CDC42BPB-206ENST00000559790 PDS5AQ29RF7 1337 aaKnown RBP23.39■■□□□ 1.34
CDC42BPB-206ENST00000559790 BCAR3O75815 825 aa23.39■■□□□ 1.33
CDC42BPB-206ENST00000559790 ZFPM1Q8IX07 1006 aa23.39■■□□□ 1.33
CDC42BPB-206ENST00000559790 FAM151AQ8WW52 585 aa23.39■■□□□ 1.33
CDC42BPB-206ENST00000559790 TMOD2Q9NZR1 351 aa23.39■■□□□ 1.33
CDC42BPB-206ENST00000559790 ZNF112Q9UJU3 913 aa23.39■■□□□ 1.33
CDC42BPB-206ENST00000559790 CSADQ9Y600 493 aa23.39■■□□□ 1.33
CDC42BPB-206ENST00000559790 LOC285556D6RIA3 1793 aa23.38■■□□□ 1.33
CDC42BPB-206ENST00000559790 IRF6O14896 467 aa23.38■■□□□ 1.33
CDC42BPB-206ENST00000559790 SEMA3EO15041 775 aa23.38■■□□□ 1.33
CDC42BPB-206ENST00000559790 SLC34A2O95436 690 aa23.38■■□□□ 1.33
CDC42BPB-206ENST00000559790 GTF2A2P52657 109 aa23.37■■□□□ 1.33
CDC42BPB-206ENST00000559790 MOGSQ13724 837 aa23.37■■□□□ 1.33
CDC42BPB-206ENST00000559790 MIGA2Q7L4E1 593 aa23.37■■□□□ 1.33
CDC42BPB-206ENST00000559790 ERO1BQ86YB8 467 aa23.37■■□□□ 1.33
CDC42BPB-206ENST00000559790 ERO1AQ96HE7 468 aa23.37■■□□□ 1.33
CDC42BPB-206ENST00000559790 PTPN22Q9Y2R2 807 aa23.37■■□□□ 1.33
CDC42BPB-206ENST00000559790 DOCK3Q8IZD9 2030 aa23.37■■□□□ 1.33
CDC42BPB-206ENST00000559790 ADGRA2Q96PE1 1338 aa23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 PNMA6EA0A0J9YXQ4 647 aa23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 BTBD19C9JJ37 291 aa23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 LDHBP07195 334 aaKnown RBP23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 TIMM10P62072 90 aa23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 SP3Q02447 781 aa23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 TCP10Q12799 353 aa23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 TFCP2Q12800 502 aa23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 PPIL2Q13356 520 aa23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 TAF1CQ15572 869 aaPredicted RBP23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 SH3BP5LQ7L8J4 393 aa23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 DENND2AQ9ULE3 1009 aa23.36■■□□□ 1.33
CDC42BPB-206ENST00000559790 A0A1B0GUL7 405 aa23.35■■□□□ 1.33
CDC42BPB-206ENST00000559790 POTEFA5A3E0 1075 aa23.35■■□□□ 1.33
CDC42BPB-206ENST00000559790 SRGAP3O43295 1099 aa23.35■■□□□ 1.33
CDC42BPB-206ENST00000559790 SLURP2P0DP57 97 aa23.35■■□□□ 1.33
CDC42BPB-206ENST00000559790 OTUD7BQ6GQQ9 843 aa23.35■■□□□ 1.33
CDC42BPB-206ENST00000559790 ZNF341Q9BYN7 854 aa23.35■■□□□ 1.33
CDC42BPB-206ENST00000559790 GNAI3P08754 354 aa23.34■■□□□ 1.33
CDC42BPB-206ENST00000559790 PI16Q6UXB8 463 aa23.34■■□□□ 1.33
CDC42BPB-206ENST00000559790 ATF7IPQ6VMQ6 1270 aa23.34■■□□□ 1.33
CDC42BPB-206ENST00000559790 ARMC5Q96C12 935 aa23.34■■□□□ 1.33
CDC42BPB-206ENST00000559790 XAGE2Q96GT9 111 aa23.34■■□□□ 1.33
CDC42BPB-206ENST00000559790 DDX4Q9NQI0 724 aaKnown RBP23.34■■□□□ 1.33
CDC42BPB-206ENST00000559790 NOL9Q5SY16 702 aaKnown RBP23.33■■□□□ 1.33
CDC42BPB-206ENST00000559790 DCAF15Q66K64 600 aa23.33■■□□□ 1.33
CDC42BPB-206ENST00000559790 IDI2Q9BXS1 227 aa23.33■■□□□ 1.33
CDC42BPB-206ENST00000559790 ARHGAP39Q9C0H5 1083 aa23.33■■□□□ 1.33
CDC42BPB-206ENST00000559790 GNL3LQ9NVN8 582 aaKnown RBP23.33■■□□□ 1.33
CDC42BPB-206ENST00000559790 KCNH4Q9UQ05 1017 aa23.33■■□□□ 1.33
CDC42BPB-206ENST00000559790 WDHD1O75717 1129 aaPredicted RBP23.32■■□□□ 1.32
CDC42BPB-206ENST00000559790 ZCCHC17Q9NP64 241 aaKnown RBP23.32■■□□□ 1.32
CDC42BPB-206ENST00000559790 USP40Q9NVE5 1235 aa23.32■■□□□ 1.32
CDC42BPB-206ENST00000559790 PHF20L1A8MW92 1017 aa23.31■■□□□ 1.32
CDC42BPB-206ENST00000559790 CETPP11597 493 aa23.31■■□□□ 1.32
CDC42BPB-206ENST00000559790 CTGFP29279 349 aa23.31■■□□□ 1.32
CDC42BPB-206ENST00000559790 RGS3P49796 1198 aa23.31■■□□□ 1.32
CDC42BPB-206ENST00000559790 PPATQ06203 517 aa23.31■■□□□ 1.32
CDC42BPB-206ENST00000559790 CLUAP1Q96AJ1 413 aa23.31■■□□□ 1.32
CDC42BPB-206ENST00000559790 FAM163AQ96GL9 167 aaPredicted RBP23.31■■□□□ 1.32
CDC42BPB-206ENST00000559790 EFCC1Q9HA90 598 aa23.31■■□□□ 1.32
CDC42BPB-206ENST00000559790 HDAC5Q9UQL6 1122 aa23.31■■□□□ 1.32
CDC42BPB-206ENST00000559790 TLR2O60603 784 aa23.3■■□□□ 1.32
CDC42BPB-206ENST00000559790 RHBDL3P58872 404 aa23.3■■□□□ 1.32
CDC42BPB-206ENST00000559790 SNAPC2Q13487 334 aa23.3■■□□□ 1.32
CDC42BPB-206ENST00000559790 TMEM57Q8N5G2 664 aa23.3■■□□□ 1.32
CDC42BPB-206ENST00000559790 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.3■■□□□ 1.32
CDC42BPB-206ENST00000559790 HOOK2Q96ED9 719 aa23.3■■□□□ 1.32
CDC42BPB-206ENST00000559790 ZFYVE28Q9HCC9 887 aa23.3■■□□□ 1.32
CDC42BPB-206ENST00000559790 MAP3K10Q02779 954 aa23.29■■□□□ 1.32
CDC42BPB-206ENST00000559790 HMG20BQ9P0W2 317 aa23.29■■□□□ 1.32
CDC42BPB-206ENST00000559790 PTCH2Q9Y6C5 1203 aa23.29■■□□□ 1.32
CDC42BPB-206ENST00000559790 COL2A1P02458 1487 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms