RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 ASAP3Q8TDY4 903 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 GATA6Q92908 595 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 METTL22Q9BUU2 404 aaPredicted RBP5.99□□□□□ -1.45
CASC4-210ENST00000559550 EHD4Q9H223 541 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 LIN7BQ9HAP6 207 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 OSGEPQ9NPF4 335 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 GAS2O43903 313 aaKnown RBP5.98□□□□□ -1.45
CASC4-210ENST00000559550 FARP2O94887 1054 aaPredicted RBP5.98□□□□□ -1.45
CASC4-210ENST00000559550 TIAF1O95411 115 aa5.98□□□□□ -1.45
CASC4-210ENST00000559550 PIP4K2BP78356 416 aa5.98□□□□□ -1.45
CASC4-210ENST00000559550 GRM2Q14416 872 aa5.98□□□□□ -1.45
CASC4-210ENST00000559550 A0A096LPE4 126 aa5.97□□□□□ -1.45
CASC4-210ENST00000559550 A0A1W2PPZ6 126 aa5.97□□□□□ -1.45
CASC4-210ENST00000559550 H3BRJ5 948 aa5.97□□□□□ -1.45
CASC4-210ENST00000559550 GADD45BO75293 160 aaPredicted RBP5.97□□□□□ -1.45
CASC4-210ENST00000559550 LDHBP07195 334 aaKnown RBP5.97□□□□□ -1.45
CASC4-210ENST00000559550 NLRP12P59046 1061 aa5.97□□□□□ -1.45
CASC4-210ENST00000559550 GLIS3Q8NEA6 775 aa5.97□□□□□ -1.45
CASC4-210ENST00000559550 BSNDQ8WZ55 320 aa5.97□□□□□ -1.45
CASC4-210ENST00000559550 ABCB6Q9NP58 842 aa5.97□□□□□ -1.45
CASC4-210ENST00000559550 RNF19AQ9NV58 838 aa5.97□□□□□ -1.45
CASC4-210ENST00000559550 ZC3H7BQ9UGR2 993 aaKnown RBP5.97□□□□□ -1.45
CASC4-210ENST00000559550 FAM95CA0A1B0GW59 222 aa5.96□□□□□ -1.46
CASC4-210ENST00000559550 TMCO4Q5TGY1 634 aa5.96□□□□□ -1.46
CASC4-210ENST00000559550 PRPF40BQ6NWY9 871 aaKnown RBP5.96□□□□□ -1.46
CASC4-210ENST00000559550 ZAR1Q86SH2 424 aa5.96□□□□□ -1.46
CASC4-210ENST00000559550 TMPRSS13Q9BYE2 586 aa5.96□□□□□ -1.46
CASC4-210ENST00000559550 NLRP2Q9NX02 1062 aa5.96□□□□□ -1.46
CASC4-210ENST00000559550 SOX1O00570 391 aaPredicted RBP5.95□□□□□ -1.46
CASC4-210ENST00000559550 RXRBP28702 533 aa5.95□□□□□ -1.46
CASC4-210ENST00000559550 TAGLNQ01995 201 aaKnown RBP5.95□□□□□ -1.46
CASC4-210ENST00000559550 NFKBIBQ15653 356 aa5.95□□□□□ -1.46
CASC4-210ENST00000559550 ZNF792Q3KQV3 632 aa5.95□□□□□ -1.46
CASC4-210ENST00000559550 CDPF1Q6NVV7 123 aa5.95□□□□□ -1.46
CASC4-210ENST00000559550 NXPE4Q6UWF7 544 aa5.95□□□□□ -1.46
CASC4-210ENST00000559550 SMG8Q8ND04 991 aaKnown RBP5.95□□□□□ -1.46
CASC4-210ENST00000559550 SLC7A3Q8WY07 619 aa5.95□□□□□ -1.46
CASC4-210ENST00000559550 BCO2Q9BYV7 579 aa5.95□□□□□ -1.46
CASC4-210ENST00000559550 SUGCTQ9HAC7 445 aa5.95□□□□□ -1.46
CASC4-210ENST00000559550 PRKAG2Q9UGJ0 569 aa5.95□□□□□ -1.46
CASC4-210ENST00000559550 NCANO14594 1321 aa5.95□□□□□ -1.46
CASC4-210ENST00000559550 TMEM238LA0A1B0GVL6 79 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 FAM170BA6NMN3 283 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 ESRRAP11474 423 aaPredicted RBP5.94□□□□□ -1.46
CASC4-210ENST00000559550 ITPKAP23677 461 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 CABP4P57796 275 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 MESP2Q0VG99 397 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 IKBKEQ14164 716 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 ZNF423Q2M1K9 1284 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 EAPPQ56P03 285 aaPredicted RBP5.94□□□□□ -1.46
CASC4-210ENST00000559550 ALG1LQ6GMV1 187 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 FBXO33Q7Z6M2 555 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 FBF1Q8TES7 1133 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 BCL7CQ8WUZ0 217 aaPredicted RBP5.94□□□□□ -1.46
CASC4-210ENST00000559550 EZH1Q92800 747 aaPredicted RBP5.94□□□□□ -1.46
CASC4-210ENST00000559550 OSBPL7Q9BZF2 842 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 ZNF576Q9H609 170 aa5.94□□□□□ -1.46
CASC4-210ENST00000559550 FAM177BA6PVY3 158 aa5.93□□□□□ -1.46
CASC4-210ENST00000559550 BIN1O00499 593 aa5.93□□□□□ -1.46
CASC4-210ENST00000559550 PRRG2O14669 202 aa5.93□□□□□ -1.46
CASC4-210ENST00000559550 PRPF40AO75400 957 aaKnown RBP5.93□□□□□ -1.46
CASC4-210ENST00000559550 MFAP1P55081 439 aaKnown RBP5.93□□□□□ -1.46
CASC4-210ENST00000559550 FCGRTP55899 365 aa5.93□□□□□ -1.46
CASC4-210ENST00000559550 ATP2B2Q01814 1243 aa5.93□□□□□ -1.46
CASC4-210ENST00000559550 PCDH1Q08174 1060 aa5.93□□□□□ -1.46
CASC4-210ENST00000559550 PAOXQ6QHF9 649 aa5.93□□□□□ -1.46
CASC4-210ENST00000559550 ZNF574Q6ZN55 896 aaPredicted RBP5.93□□□□□ -1.46
CASC4-210ENST00000559550 FBLIM1Q8WUP2 373 aa5.93□□□□□ -1.46
CASC4-210ENST00000559550 TBC1D32Q96NH3 1257 aa5.93□□□□□ -1.46
CASC4-210ENST00000559550 DUSP9Q99956 384 aaKnown RBP5.93□□□□□ -1.46
CASC4-210ENST00000559550 CLEC4MQ9H2X3 399 aaPredicted RBP5.93□□□□□ -1.46
CASC4-210ENST00000559550 TRAK1Q9UPV9 953 aa5.93□□□□□ -1.46
CASC4-210ENST00000559550 DLGAP3O95886 979 aa5.92□□□□□ -1.46
CASC4-210ENST00000559550 C19orf57Q0VDD7 668 aa5.92□□□□□ -1.46
CASC4-210ENST00000559550 FAAP100Q0VG06 881 aa5.92□□□□□ -1.46
CASC4-210ENST00000559550 PKN1Q16512 942 aa5.92□□□□□ -1.46
CASC4-210ENST00000559550 SPRED2Q7Z698 418 aa5.92□□□□□ -1.46
CASC4-210ENST00000559550 ATG4DQ86TL0 474 aaPredicted RBP5.92□□□□□ -1.46
CASC4-210ENST00000559550 C1QL4Q86Z23 238 aa5.92□□□□□ -1.46
CASC4-210ENST00000559550 C12orf50Q8NA57 414 aaPredicted RBP5.92□□□□□ -1.46
CASC4-210ENST00000559550 TMEM40Q8WWA1 233 aa5.92□□□□□ -1.46
CASC4-210ENST00000559550 NUTM2GQ5VZR2 741 aa5.91□□□□□ -1.46
CASC4-210ENST00000559550 LILRA6Q6PI73 481 aa5.91□□□□□ -1.46
CASC4-210ENST00000559550 KSR1Q8IVT5 923 aa5.91□□□□□ -1.46
CASC4-210ENST00000559550 C3orf58Q8NDZ4 430 aa5.91□□□□□ -1.46
CASC4-210ENST00000559550 FAM168AQ92567 244 aa5.91□□□□□ -1.46
CASC4-210ENST00000559550 B3GALT4O96024 378 aa5.9□□□□□ -1.46
CASC4-210ENST00000559550 DRD2P14416 443 aa5.9□□□□□ -1.46
CASC4-210ENST00000559550 GNA15P30679 374 aa5.9□□□□□ -1.46
CASC4-210ENST00000559550 PTPN12Q05209 780 aaKnown RBP5.9□□□□□ -1.46
CASC4-210ENST00000559550 PLCL1Q15111 1095 aa5.9□□□□□ -1.46
CASC4-210ENST00000559550 DTHD1Q6ZMT9 781 aa5.9□□□□□ -1.46
CASC4-210ENST00000559550 C2CD4AQ8NCU7 369 aaPredicted RBP5.9□□□□□ -1.46
CASC4-210ENST00000559550 FAM161BQ96MY7 647 aa5.9□□□□□ -1.46
CASC4-210ENST00000559550 SPG7Q9UQ90 795 aa5.9□□□□□ -1.46
CASC4-210ENST00000559550 SLC5A6Q9Y289 635 aa5.9□□□□□ -1.46
CASC4-210ENST00000559550 LOC100289279A0A1B0GTE1 492 aa5.89□□□□□ -1.47
CASC4-210ENST00000559550 ERCC3P19447 782 aa5.89□□□□□ -1.47
CASC4-210ENST00000559550 CFPP27918 469 aa5.89□□□□□ -1.47
CASC4-210ENST00000559550 ARL4DP49703 201 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms