RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 ORC3Q9UBD5 711 aaPredicted RBP15.58■□□□□ 0.09
CPNE6-210ENST00000558995 ANKRD36CQ5JPF3 1778 aa15.58■□□□□ 0.09
CPNE6-210ENST00000558995 ANTXR2P58335 489 aa15.58■□□□□ 0.08
CPNE6-210ENST00000558995 LRMPQ12912 555 aa15.58■□□□□ 0.08
CPNE6-210ENST00000558995 FMR1NBQ8N0W7 255 aaPredicted RBP15.58■□□□□ 0.08
CPNE6-210ENST00000558995 LINC00301Q8NCQ3 95 aa15.58■□□□□ 0.08
CPNE6-210ENST00000558995 MRFAP1L1Q96HT8 127 aa15.58■□□□□ 0.08
CPNE6-210ENST00000558995 HELBQ8NG08 1087 aaPredicted RBP15.58■□□□□ 0.08
CPNE6-210ENST00000558995 KCNG4Q8TDN1 519 aa15.58■□□□□ 0.08
CPNE6-210ENST00000558995 BECN2A8MW95 431 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 CPLX1O14810 134 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 YEATS4O95619 227 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 APPP05067 770 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 MCAMP43121 646 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 BRAPQ7Z569 592 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 LINC00116Q8NCU8 138 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 POLR3EQ9NVU0 708 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 NIP7Q9Y221 180 aaKnown RBP eCLIP15.57■□□□□ 0.08
CPNE6-210ENST00000558995 PATL2C9JE40 543 aaKnown RBP15.57■□□□□ 0.08
CPNE6-210ENST00000558995 ADD2P35612 726 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 IRX5P78411 483 aaPredicted RBP15.57■□□□□ 0.08
CPNE6-210ENST00000558995 TTF1Q15361 905 aaPredicted RBP15.57■□□□□ 0.08
CPNE6-210ENST00000558995 OTUD7BQ6GQQ9 843 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 VGLL2Q8N8G2 317 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 SEC31BQ9NQW1 1179 aa15.57■□□□□ 0.08
CPNE6-210ENST00000558995 SNAP23O00161 211 aa15.56■□□□□ 0.08
CPNE6-210ENST00000558995 STK38Q15208 465 aa15.56■□□□□ 0.08
CPNE6-210ENST00000558995 SF3A1Q15459 793 aaKnown RBP15.56■□□□□ 0.08
CPNE6-210ENST00000558995 NAT10Q9H0A0 1025 aaKnown RBP15.56■□□□□ 0.08
CPNE6-210ENST00000558995 TRDNQ13061 729 aa15.56■□□□□ 0.08
CPNE6-210ENST00000558995 DHX40Q8IX18 779 aaKnown RBP15.56■□□□□ 0.08
CPNE6-210ENST00000558995 CEP57L1Q8IYX8 460 aa15.56■□□□□ 0.08
CPNE6-210ENST00000558995 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
CPNE6-210ENST00000558995 CACTINQ8WUQ7 758 aaKnown RBP15.56■□□□□ 0.08
CPNE6-210ENST00000558995 SMARCC1Q92922 1105 aaPredicted RBP15.56■□□□□ 0.08
CPNE6-210ENST00000558995 SDF4Q9BRK5 362 aa15.56■□□□□ 0.08
CPNE6-210ENST00000558995 UTP14AQ9BVJ6 771 aaKnown RBP15.56■□□□□ 0.08
CPNE6-210ENST00000558995 USP21Q9UK80 565 aa15.56■□□□□ 0.08
CPNE6-210ENST00000558995 CLIC4Q9Y696 253 aa15.56■□□□□ 0.08
CPNE6-210ENST00000558995 POLR3DP05423 398 aaPredicted RBP15.55■□□□□ 0.08
CPNE6-210ENST00000558995 CCDC144BQ3MJ40 725 aa15.55■□□□□ 0.08
CPNE6-210ENST00000558995 SLC9C2Q5TAH2 1124 aa15.55■□□□□ 0.08
CPNE6-210ENST00000558995 MYSM1Q5VVJ2 828 aa15.55■□□□□ 0.08
CPNE6-210ENST00000558995 CCDC144CPQ8IYA2 1237 aa15.55■□□□□ 0.08
CPNE6-210ENST00000558995 MYH15Q9Y2K3 1946 aa15.55■□□□□ 0.08
CPNE6-210ENST00000558995 PDE8BO95263 885 aa15.55■□□□□ 0.08
CPNE6-210ENST00000558995 A0A1B0GVL5 298 aa15.54■□□□□ 0.08
CPNE6-210ENST00000558995 SPTLC2O15270 562 aa15.54■□□□□ 0.08
CPNE6-210ENST00000558995 NEMFO60524 1076 aa15.54■□□□□ 0.08
CPNE6-210ENST00000558995 NDUFA8P51970 172 aa15.54■□□□□ 0.08
CPNE6-210ENST00000558995 UBE3CQ15386 1083 aa15.54■□□□□ 0.08
CPNE6-210ENST00000558995 TSC1Q92574 1164 aa15.54■□□□□ 0.08
CPNE6-210ENST00000558995 RIOK3O14730 519 aaKnown RBP15.54■□□□□ 0.08
CPNE6-210ENST00000558995 NTSR2O95665 410 aa15.54■□□□□ 0.08
CPNE6-210ENST00000558995 SYNE3Q6ZMZ3 975 aa15.54■□□□□ 0.08
CPNE6-210ENST00000558995 ATRNO75882 1429 aa15.54■□□□□ 0.08
CPNE6-210ENST00000558995 ZNF710Q8N1W2 664 aa15.53■□□□□ 0.08
CPNE6-210ENST00000558995 NBPF3Q9H094 633 aa15.53■□□□□ 0.08
CPNE6-210ENST00000558995 ANGEL1Q9UNK9 670 aaKnown RBP15.53■□□□□ 0.08
CPNE6-210ENST00000558995 MYH3P11055 1940 aa15.53■□□□□ 0.08
CPNE6-210ENST00000558995 KIF23Q02241 960 aaPredicted RBP15.53■□□□□ 0.08
CPNE6-210ENST00000558995 RAB11FIP4Q86YS3 637 aa15.53■□□□□ 0.08
CPNE6-210ENST00000558995 LRRC8AQ8IWT6 810 aa15.53■□□□□ 0.08
CPNE6-210ENST00000558995 PIH1D3Q9NQM4 214 aaKnown RBP15.53■□□□□ 0.08
CPNE6-210ENST00000558995 KIAA1468Q9P260 1216 aa15.53■□□□□ 0.08
CPNE6-210ENST00000558995 ZMYM6O95789 1325 aa15.53■□□□□ 0.08
CPNE6-210ENST00000558995 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.53■□□□□ 0.08
CPNE6-210ENST00000558995 SLC20A2Q08357 652 aa15.53■□□□□ 0.08
CPNE6-210ENST00000558995 ANO1Q5XXA6 986 aa15.53■□□□□ 0.08
CPNE6-210ENST00000558995 A0A087WWV3 80 aa15.52■□□□□ 0.08
CPNE6-210ENST00000558995 IDH1O75874 414 aaKnown RBP15.52■□□□□ 0.08
CPNE6-210ENST00000558995 UQCRFS1P1P0C7P4 283 aa15.52■□□□□ 0.08
CPNE6-210ENST00000558995 PHKA1P46020 1223 aa15.52■□□□□ 0.08
CPNE6-210ENST00000558995 PARP10Q53GL7 1025 aa15.52■□□□□ 0.08
CPNE6-210ENST00000558995 TBC1D10CQ8IV04 446 aa15.52■□□□□ 0.08
CPNE6-210ENST00000558995 KIF28PB7ZC32 967 aa15.52■□□□□ 0.07
CPNE6-210ENST00000558995 CDKL5O76039 1030 aa15.52■□□□□ 0.07
CPNE6-210ENST00000558995 CCDC102BQ68D86 513 aa15.52■□□□□ 0.07
CPNE6-210ENST00000558995 AOPEPQ8N6M6 819 aa15.52■□□□□ 0.07
CPNE6-210ENST00000558995 BCL2L12Q9HB09 334 aa15.52■□□□□ 0.07
CPNE6-210ENST00000558995 GJB4Q9NTQ9 266 aa15.52■□□□□ 0.07
CPNE6-210ENST00000558995 SH2B2O14492 632 aaPredicted RBP15.51■□□□□ 0.07
CPNE6-210ENST00000558995 ARID4AP29374 1257 aaPredicted RBP15.51■□□□□ 0.07
CPNE6-210ENST00000558995 RBM6P78332 1123 aaKnown RBP15.51■□□□□ 0.07
CPNE6-210ENST00000558995 ZRSR1Q15695 479 aaKnown RBP15.51■□□□□ 0.07
CPNE6-210ENST00000558995 BICDL1Q6ZP65 573 aa15.51■□□□□ 0.07
CPNE6-210ENST00000558995 ERCC4Q92889 916 aaPredicted RBP15.51■□□□□ 0.07
CPNE6-210ENST00000558995 BPIFA3Q9BQP9 254 aa15.51■□□□□ 0.07
CPNE6-210ENST00000558995 ZNF532Q9HCE3 1301 aa15.51■□□□□ 0.07
CPNE6-210ENST00000558995 RREB1Q92766 1687 aa15.51■□□□□ 0.07
CPNE6-210ENST00000558995 CTIFO43310 598 aaKnown RBP15.51■□□□□ 0.07
CPNE6-210ENST00000558995 PDE6AP16499 860 aa15.51■□□□□ 0.07
CPNE6-210ENST00000558995 CMA1P23946 247 aa15.51■□□□□ 0.07
CPNE6-210ENST00000558995 METAP2P50579 478 aaKnown RBP eCLIP15.51■□□□□ 0.07
CPNE6-210ENST00000558995 CPLX2Q6PUV4 134 aaKnown RBP15.51■□□□□ 0.07
CPNE6-210ENST00000558995 CYB5R4Q7L1T6 521 aa15.51■□□□□ 0.07
CPNE6-210ENST00000558995 C16orf45Q96MC5 204 aaPredicted RBP15.51■□□□□ 0.07
CPNE6-210ENST00000558995 MPHOSPH8Q99549 860 aa15.51■□□□□ 0.07
CPNE6-210ENST00000558995 TNNT1P13805 278 aa15.5■□□□□ 0.07
CPNE6-210ENST00000558995 AXDND1Q5T1B0 1012 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms