RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 NACAP1Q9BZK3 213 aa17.79■□□□□ 0.44
VPS18-202ENST00000558474 TIAM2Q8IVF5 1701 aa17.78■□□□□ 0.44
VPS18-202ENST00000558474 FOCADQ5VW36 1801 aa17.78■□□□□ 0.44
VPS18-202ENST00000558474 DIXDC1Q155Q3 683 aa17.78■□□□□ 0.44
VPS18-202ENST00000558474 LCORLQ8N3X6 602 aa17.78■□□□□ 0.44
VPS18-202ENST00000558474 OGFOD1Q8N543 542 aa17.78■□□□□ 0.44
VPS18-202ENST00000558474 MIGA1Q8NAN2 632 aa17.78■□□□□ 0.44
VPS18-202ENST00000558474 DPF2Q92785 391 aa17.78■□□□□ 0.44
VPS18-202ENST00000558474 ARMT1Q9H993 441 aa17.78■□□□□ 0.44
VPS18-202ENST00000558474 ATP8A2Q9NTI2 1148 aa17.78■□□□□ 0.44
VPS18-202ENST00000558474 RBM8AQ9Y5S9 174 aaKnown RBP17.78■□□□□ 0.44
VPS18-202ENST00000558474 BTDP43251 543 aa17.77■□□□□ 0.44
VPS18-202ENST00000558474 CRKP46108 304 aa17.77■□□□□ 0.44
VPS18-202ENST00000558474 TSGA10IPQ3SY00 556 aa17.77■□□□□ 0.44
VPS18-202ENST00000558474 KIAA0825Q8IV33 1275 aa17.77■□□□□ 0.44
VPS18-202ENST00000558474 MTMR14Q8NCE2 650 aa17.77■□□□□ 0.44
VPS18-202ENST00000558474 MXD3Q9BW11 206 aa17.77■□□□□ 0.44
VPS18-202ENST00000558474 AATFQ9NY61 560 aaKnown RBP eCLIP17.77■□□□□ 0.44
VPS18-202ENST00000558474 DAGLAQ9Y4D2 1042 aa17.77■□□□□ 0.44
VPS18-202ENST00000558474 SLC4A4Q9Y6R1 1079 aa17.77■□□□□ 0.44
VPS18-202ENST00000558474 LAMA4Q16363 1823 aa17.77■□□□□ 0.43
VPS18-202ENST00000558474 ECM29Q5VYK3 1845 aa17.77■□□□□ 0.43
VPS18-202ENST00000558474 GSG1L2A8MUP6 293 aa17.76■□□□□ 0.43
VPS18-202ENST00000558474 F8W031 263 aaPredicted RBP17.76■□□□□ 0.43
VPS18-202ENST00000558474 ZKSCAN1P17029 563 aaPredicted RBP17.76■□□□□ 0.43
VPS18-202ENST00000558474 VPS53Q5VIR6 699 aa17.76■□□□□ 0.43
VPS18-202ENST00000558474 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
VPS18-202ENST00000558474 CDK5RAP2Q96SN8 1893 aa17.75■□□□□ 0.43
VPS18-202ENST00000558474 FOXP2O15409 715 aa17.75■□□□□ 0.43
VPS18-202ENST00000558474 FGAP02671 866 aa17.75■□□□□ 0.43
VPS18-202ENST00000558474 USP17L8P0C7I0 530 aa17.75■□□□□ 0.43
VPS18-202ENST00000558474 DYNLL1P63167 89 aaKnown RBP17.75■□□□□ 0.43
VPS18-202ENST00000558474 KRT32Q14532 448 aa17.75■□□□□ 0.43
VPS18-202ENST00000558474 IFNL3Q8IZI9 196 aa17.75■□□□□ 0.43
VPS18-202ENST00000558474 GPC2Q8N158 579 aa17.75■□□□□ 0.43
VPS18-202ENST00000558474 APPP05067 770 aa17.74■□□□□ 0.43
VPS18-202ENST00000558474 ZNF280AP59817 542 aaPredicted RBP17.74■□□□□ 0.43
VPS18-202ENST00000558474 IMMTQ16891 758 aaKnown RBP17.74■□□□□ 0.43
VPS18-202ENST00000558474 CREB3L3Q68CJ9 461 aa17.74■□□□□ 0.43
VPS18-202ENST00000558474 APOBEC3HQ6NTF7 200 aaKnown RBP17.74■□□□□ 0.43
VPS18-202ENST00000558474 NAPBQ9H115 298 aa17.74■□□□□ 0.43
VPS18-202ENST00000558474 RNF181Q9P0P0 153 aa17.74■□□□□ 0.43
VPS18-202ENST00000558474 SLC27A2O14975 620 aa17.73■□□□□ 0.43
VPS18-202ENST00000558474 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
VPS18-202ENST00000558474 SCNN1DP51172 638 aa17.73■□□□□ 0.43
VPS18-202ENST00000558474 RHBDL3P58872 404 aa17.73■□□□□ 0.43
VPS18-202ENST00000558474 NAV1Q8NEY1 1877 aa17.72■□□□□ 0.43
VPS18-202ENST00000558474 LAMB1P07942 1786 aa17.72■□□□□ 0.43
VPS18-202ENST00000558474 CFAP100Q494V2 611 aa17.72■□□□□ 0.43
VPS18-202ENST00000558474 SBK1Q52WX2 424 aa17.72■□□□□ 0.43
VPS18-202ENST00000558474 C9orf131Q5VYM1 1079 aa17.72■□□□□ 0.43
VPS18-202ENST00000558474 SH3RF3Q8TEJ3 882 aaPredicted RBP17.72■□□□□ 0.43
VPS18-202ENST00000558474 TM6SF1Q9BZW5 370 aa17.72■□□□□ 0.43
VPS18-202ENST00000558474 EPB41L4AQ9HCS5 686 aaPredicted RBP17.72■□□□□ 0.43
VPS18-202ENST00000558474 DCP1AQ9NPI6 582 aaPredicted RBP17.72■□□□□ 0.43
VPS18-202ENST00000558474 MKRN1Q9UHC7 482 aaKnown RBP17.72■□□□□ 0.43
VPS18-202ENST00000558474 ZBTB12Q9Y330 459 aaPredicted RBP17.72■□□□□ 0.43
VPS18-202ENST00000558474 RBM19Q9Y4C8 960 aaKnown RBP17.72■□□□□ 0.43
VPS18-202ENST00000558474 ZNF541Q9H0D2 1346 aa17.72■□□□□ 0.43
VPS18-202ENST00000558474 ADAMTSL1Q8N6G6 1762 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 ZNF213O14771 459 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 PRKAB2O43741 272 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 CYP21A2P08686 494 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 USP5P45974 858 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 TDO2P48775 406 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 NT5C2P49902 561 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 RBM5P52756 815 aaKnown RBP eCLIP17.71■□□□□ 0.43
VPS18-202ENST00000558474 RABEP1Q15276 862 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 DLGAP5Q15398 846 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 TEX11Q8IYF3 940 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 USP40Q9NVE5 1235 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 ARPP21Q9UBL0 812 aaPredicted RBP17.71■□□□□ 0.43
VPS18-202ENST00000558474 ANAPC4Q9UJX5 808 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 TAOK2Q9UL54 1235 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 SNX14Q9Y5W7 946 aa17.71■□□□□ 0.43
VPS18-202ENST00000558474 DDX60LQ5H9U9 1706 aaKnown RBP17.71■□□□□ 0.43
VPS18-202ENST00000558474 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
VPS18-202ENST00000558474 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
VPS18-202ENST00000558474 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
VPS18-202ENST00000558474 PCP11498 1178 aaKnown RBP17.7■□□□□ 0.42
VPS18-202ENST00000558474 PSMA5P28066 241 aa17.7■□□□□ 0.42
VPS18-202ENST00000558474 GMPSP49915 693 aaPredicted RBP17.7■□□□□ 0.42
VPS18-202ENST00000558474 CDC42EP5Q6NZY7 148 aa17.7■□□□□ 0.42
VPS18-202ENST00000558474 AMOTL1Q8IY63 956 aa17.7■□□□□ 0.42
VPS18-202ENST00000558474 SDR42E1Q8WUS8 393 aa17.7■□□□□ 0.42
VPS18-202ENST00000558474 ZBED3Q96IU2 234 aaPredicted RBP17.7■□□□□ 0.42
VPS18-202ENST00000558474 KIF2CQ99661 725 aa17.7■□□□□ 0.42
VPS18-202ENST00000558474 IDI2Q9BXS1 227 aa17.7■□□□□ 0.42
VPS18-202ENST00000558474 GJA3Q9Y6H8 435 aa17.7■□□□□ 0.42
VPS18-202ENST00000558474 MYH1P12882 1939 aa17.69■□□□□ 0.42
VPS18-202ENST00000558474 BAZ2AQ9UIF9 1905 aaKnown RBP17.69■□□□□ 0.42
VPS18-202ENST00000558474 HMGB1P09429 215 aaKnown RBP17.69■□□□□ 0.42
VPS18-202ENST00000558474 FKBP1CQ5VVH2 108 aa17.69■□□□□ 0.42
VPS18-202ENST00000558474 DPY19L2Q6NUT2 758 aa17.69■□□□□ 0.42
VPS18-202ENST00000558474 MYOZ2Q9NPC6 264 aa17.69■□□□□ 0.42
VPS18-202ENST00000558474 PALD1Q9ULE6 856 aa17.69■□□□□ 0.42
VPS18-202ENST00000558474 H7C1D1 291 aa17.68■□□□□ 0.42
VPS18-202ENST00000558474 MYO1BO43795 1136 aa17.68■□□□□ 0.42
VPS18-202ENST00000558474 RASEFQ8IZ41 740 aa17.68■□□□□ 0.42
VPS18-202ENST00000558474 TGFBRAP1Q8WUH2 860 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms