RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 ITPK1Q13572 414 aa9.05□□□□□ -0.96
TRPM1-206ENST00000558212 DALRD3Q5D0E6 543 aaKnown RBP9.05□□□□□ -0.96
TRPM1-206ENST00000558212 C7orf43Q8WVR3 580 aa9.05□□□□□ -0.96
TRPM1-206ENST00000558212 CHMP3Q9Y3E7 222 aa9.05□□□□□ -0.96
TRPM1-206ENST00000558212 PARP3Q9Y6F1 533 aa9.05□□□□□ -0.96
TRPM1-206ENST00000558212 CTSOP43234 321 aaPredicted RBP9.04□□□□□ -0.96
TRPM1-206ENST00000558212 MARSP56192 900 aaKnown RBP9.04□□□□□ -0.96
TRPM1-206ENST00000558212 RTN1Q16799 776 aa9.04□□□□□ -0.96
TRPM1-206ENST00000558212 TRAPPC3LQ5T215 181 aa9.04□□□□□ -0.96
TRPM1-206ENST00000558212 C1orf53Q5VUE5 145 aa9.04□□□□□ -0.96
TRPM1-206ENST00000558212 MRPL14Q6P1L8 145 aaKnown RBP9.04□□□□□ -0.96
TRPM1-206ENST00000558212 ALDH16A1Q8IZ83 802 aa9.04□□□□□ -0.96
TRPM1-206ENST00000558212 CRIPAKQ8N1N5 446 aa9.04□□□□□ -0.96
TRPM1-206ENST00000558212 RNF217Q8TC41 542 aa9.04□□□□□ -0.96
TRPM1-206ENST00000558212 BIN2Q9UBW5 565 aaPredicted RBP9.04□□□□□ -0.96
TRPM1-206ENST00000558212 RTCBQ9Y3I0 505 aaKnown RBP9.04□□□□□ -0.96
TRPM1-206ENST00000558212 ZNF831Q5JPB2 1677 aa9.04□□□□□ -0.96
TRPM1-206ENST00000558212 INSRP06213 1382 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 KIF24Q5T7B8 1368 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 E9PSI1 815 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 FAM13AO94988 1023 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 GYS1P13807 737 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 VEGFAP15692 232 aaPredicted RBP9.03□□□□□ -0.96
TRPM1-206ENST00000558212 FBLN1P23142 703 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 MPSTP25325 297 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 RRS1Q15050 365 aaKnown RBP9.03□□□□□ -0.96
TRPM1-206ENST00000558212 C4orf17Q53FE4 359 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 WDR44Q5JSH3 913 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 PRDM10Q9NQV6 1147 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 TMOD3Q9NYL9 352 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 STIM2Q9P246 746 aa9.03□□□□□ -0.96
TRPM1-206ENST00000558212 KDM6AO15550 1401 aaPredicted RBP9.03□□□□□ -0.96
TRPM1-206ENST00000558212 FLT4P35916 1363 aa9.02□□□□□ -0.97
TRPM1-206ENST00000558212 KDRP35968 1356 aa9.02□□□□□ -0.97
TRPM1-206ENST00000558212 GLTPD2A6NH11 291 aa9.02□□□□□ -0.97
TRPM1-206ENST00000558212 CTC1Q2NKJ3 1217 aa9.02□□□□□ -0.97
TRPM1-206ENST00000558212 FAM26DQ5JW98 314 aa9.02□□□□□ -0.97
TRPM1-206ENST00000558212 TMEM214Q6NUQ4 689 aaKnown RBP9.02□□□□□ -0.97
TRPM1-206ENST00000558212 ZDHHC3Q9NYG2 299 aa9.02□□□□□ -0.97
TRPM1-206ENST00000558212 DCTN4Q9UJW0 460 aa9.02□□□□□ -0.97
TRPM1-206ENST00000558212 ASAP1Q9ULH1 1129 aa9.02□□□□□ -0.97
TRPM1-206ENST00000558212 SPG7Q9UQ90 795 aa9.02□□□□□ -0.97
TRPM1-206ENST00000558212 FAM187AA6NFU0 413 aa9.01□□□□□ -0.97
TRPM1-206ENST00000558212 UPP2O95045 317 aa9.01□□□□□ -0.97
TRPM1-206ENST00000558212 RFC4P35249 363 aa9.01□□□□□ -0.97
TRPM1-206ENST00000558212 TXLNAP40222 546 aa9.01□□□□□ -0.97
TRPM1-206ENST00000558212 NCAPD2Q15021 1401 aa9.01□□□□□ -0.97
TRPM1-206ENST00000558212 GNASQ5JWF2 1037 aa9.01□□□□□ -0.97
TRPM1-206ENST00000558212 NPAS4Q8IUM7 802 aa9.01□□□□□ -0.97
TRPM1-206ENST00000558212 PHACTR1Q9C0D0 580 aa9.01□□□□□ -0.97
TRPM1-206ENST00000558212 ZNF232Q9UNY5 417 aa9.01□□□□□ -0.97
TRPM1-206ENST00000558212 CNTNAP4Q9C0A0 1308 aa9.01□□□□□ -0.97
TRPM1-206ENST00000558212 COL5A3P25940 1745 aaPredicted RBP9□□□□□ -0.97
TRPM1-206ENST00000558212 FOXN1O15353 648 aa9□□□□□ -0.97
TRPM1-206ENST00000558212 IGSF3O75054 1194 aa9□□□□□ -0.97
TRPM1-206ENST00000558212 DGAT1O75907 488 aa9□□□□□ -0.97
TRPM1-206ENST00000558212 LMNB1P20700 586 aa9□□□□□ -0.97
TRPM1-206ENST00000558212 HSP90AB2PQ58FF8 381 aa9□□□□□ -0.97
TRPM1-206ENST00000558212 TRIM46Q7Z4K8 759 aa9□□□□□ -0.97
TRPM1-206ENST00000558212 ASB16Q96NS5 453 aa9□□□□□ -0.97
TRPM1-206ENST00000558212 RBCK1Q9BYM8 510 aa9□□□□□ -0.97
TRPM1-206ENST00000558212 POLMQ9NP87 494 aaPredicted RBP9□□□□□ -0.97
TRPM1-206ENST00000558212 HCN4Q9Y3Q4 1203 aa9□□□□□ -0.97
TRPM1-206ENST00000558212 GPC6Q9Y625 555 aaPredicted RBP9□□□□□ -0.97
TRPM1-206ENST00000558212 TIAM2Q8IVF5 1701 aa9□□□□□ -0.97
TRPM1-206ENST00000558212 RPS6KA4O75676 772 aa8.99□□□□□ -0.97
TRPM1-206ENST00000558212 BMP2P12643 396 aa8.99□□□□□ -0.97
TRPM1-206ENST00000558212 GTF2E1P29083 439 aaPredicted RBP8.99□□□□□ -0.97
TRPM1-206ENST00000558212 EIF1AXP47813 144 aaKnown RBP8.99□□□□□ -0.97
TRPM1-206ENST00000558212 CTCFP49711 727 aaPredicted RBP8.99□□□□□ -0.97
TRPM1-206ENST00000558212 C11orf91Q3C1V1 193 aa8.99□□□□□ -0.97
TRPM1-206ENST00000558212 NBPF10Q6P3W6 841 aaKnown RBP8.99□□□□□ -0.97
TRPM1-206ENST00000558212 AIDAQ96BJ3 306 aa8.99□□□□□ -0.97
TRPM1-206ENST00000558212 CARD11Q9BXL7 1154 aa8.99□□□□□ -0.97
TRPM1-206ENST00000558212 ATG3Q9NT62 314 aa8.99□□□□□ -0.97
TRPM1-206ENST00000558212 RBM47A0AV96 593 aaKnown RBP8.98□□□□□ -0.97
TRPM1-206ENST00000558212 NRG2O14511 850 aaPredicted RBP8.98□□□□□ -0.97
TRPM1-206ENST00000558212 FZD6O60353 706 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 IGHA2P01877 340 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 ATP4AP20648 1035 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 BRD2P25440 801 aaKnown RBP8.98□□□□□ -0.97
TRPM1-206ENST00000558212 CHRNA5P30532 468 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 PLA2G4AP47712 749 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 RASSF7Q02833 373 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 ETFBKMTQ8IXQ9 262 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 IFNL2Q8IZJ0 200 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 RGL4Q8IZJ4 473 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 CNTNAP1P78357 1384 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 TONSLQ96HA7 1378 aa8.98□□□□□ -0.97
TRPM1-206ENST00000558212 MYH14Q7Z406 1995 aaKnown RBP8.97□□□□□ -0.97
TRPM1-206ENST00000558212 ZBTB39O15060 712 aa8.97□□□□□ -0.97
TRPM1-206ENST00000558212 FYB1O15117 783 aa8.97□□□□□ -0.97
TRPM1-206ENST00000558212 BMP1P13497 986 aa8.97□□□□□ -0.97
TRPM1-206ENST00000558212 PHKG2P15735 406 aa8.97□□□□□ -0.97
TRPM1-206ENST00000558212 DDR1Q08345 913 aa8.97□□□□□ -0.97
TRPM1-206ENST00000558212 DGKZQ13574 1117 aa8.97□□□□□ -0.97
TRPM1-206ENST00000558212 ALKBH2Q6NS38 261 aa8.97□□□□□ -0.97
TRPM1-206ENST00000558212 LYSMD3Q7Z3D4 306 aa8.97□□□□□ -0.97
TRPM1-206ENST00000558212 CITED4Q96RK1 184 aa8.97□□□□□ -0.97
TRPM1-206ENST00000558212 GGNBP2Q9H3C7 697 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms