RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 PI4K2BQ8TCG2 481 aa17.42■□□□□ 0.38
USP3-205ENST00000557884 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
USP3-205ENST00000557884 TMOD2Q9NZR1 351 aa17.42■□□□□ 0.38
USP3-205ENST00000557884 TTC41PQ6P2S7 1318 aa17.42■□□□□ 0.38
USP3-205ENST00000557884 ERC2O15083 957 aa17.41■□□□□ 0.38
USP3-205ENST00000557884 CYP7A1P22680 504 aa17.41■□□□□ 0.38
USP3-205ENST00000557884 PDE1AP54750 535 aa17.41■□□□□ 0.38
USP3-205ENST00000557884 RASA3Q14644 834 aa17.41■□□□□ 0.38
USP3-205ENST00000557884 CST9Q5W186 159 aa17.41■□□□□ 0.38
USP3-205ENST00000557884 ADGRA1Q86SQ6 560 aa17.41■□□□□ 0.38
USP3-205ENST00000557884 CEP350Q5VT06 3117 aa17.41■□□□□ 0.38
USP3-205ENST00000557884 AKAP11Q9UKA4 1901 aa17.41■□□□□ 0.38
USP3-205ENST00000557884 GPR75-ASB3A0A0A6YYF3 556 aa17.4■□□□□ 0.38
USP3-205ENST00000557884 TMEM88BA6NKF7 163 aa17.4■□□□□ 0.38
USP3-205ENST00000557884 GLRX3O76003 335 aaKnown RBP17.4■□□□□ 0.38
USP3-205ENST00000557884 NFIAQ12857 509 aa17.4■□□□□ 0.38
USP3-205ENST00000557884 AATFQ9NY61 560 aaKnown RBP eCLIP17.4■□□□□ 0.38
USP3-205ENST00000557884 PDE6AP16499 860 aa17.39■□□□□ 0.37
USP3-205ENST00000557884 TNFAIP1Q13829 316 aa17.39■□□□□ 0.37
USP3-205ENST00000557884 SLFNL1Q499Z3 407 aa17.39■□□□□ 0.37
USP3-205ENST00000557884 SLC9C2Q5TAH2 1124 aa17.39■□□□□ 0.37
USP3-205ENST00000557884 CDAN1Q8IWY9 1227 aa17.39■□□□□ 0.37
USP3-205ENST00000557884 MIGA1Q8NAN2 632 aa17.39■□□□□ 0.37
USP3-205ENST00000557884 NOL10Q9BSC4 688 aaKnown RBP17.39■□□□□ 0.37
USP3-205ENST00000557884 TMEM39BQ9GZU3 492 aa17.39■□□□□ 0.37
USP3-205ENST00000557884 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
USP3-205ENST00000557884 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
USP3-205ENST00000557884 CHGBP05060 677 aa17.38■□□□□ 0.37
USP3-205ENST00000557884 TNNI2P48788 182 aa17.38■□□□□ 0.37
USP3-205ENST00000557884 DYNLL1P63167 89 aaKnown RBP17.38■□□□□ 0.37
USP3-205ENST00000557884 TCP10Q12799 353 aa17.38■□□□□ 0.37
USP3-205ENST00000557884 SH3RF3Q8TEJ3 882 aaPredicted RBP17.38■□□□□ 0.37
USP3-205ENST00000557884 CCDC136Q96JN2 1154 aa17.38■□□□□ 0.37
USP3-205ENST00000557884 ZNF532Q9HCE3 1301 aa17.38■□□□□ 0.37
USP3-205ENST00000557884 BAG3O95817 575 aa17.37■□□□□ 0.37
USP3-205ENST00000557884 PDE4AP27815 886 aa17.37■□□□□ 0.37
USP3-205ENST00000557884 RHBDL3P58872 404 aa17.37■□□□□ 0.37
USP3-205ENST00000557884 PICALMQ13492 652 aa17.37■□□□□ 0.37
USP3-205ENST00000557884 PRKG1Q13976 671 aa17.37■□□□□ 0.37
USP3-205ENST00000557884 NBPF12Q5TAG4 269 aaPredicted RBP17.37■□□□□ 0.37
USP3-205ENST00000557884 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
USP3-205ENST00000557884 TEX11Q8IYF3 940 aa17.37■□□□□ 0.37
USP3-205ENST00000557884 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.37■□□□□ 0.371e-6■■■■□ 21.2
USP3-205ENST00000557884 CREBZFQ9NS37 354 aa17.37■□□□□ 0.37
USP3-205ENST00000557884 FAM198AQ9UFP1 575 aa17.37■□□□□ 0.37
USP3-205ENST00000557884 ABT1Q9ULW3 272 aaKnown RBP17.37■□□□□ 0.37
USP3-205ENST00000557884 PPP2R3BQ9Y5P8 575 aa17.37■□□□□ 0.37
USP3-205ENST00000557884 IGSF3O75054 1194 aa17.36■□□□□ 0.37
USP3-205ENST00000557884 WDHD1O75717 1129 aaPredicted RBP17.36■□□□□ 0.37
USP3-205ENST00000557884 RGS3P49796 1198 aa17.36■□□□□ 0.37
USP3-205ENST00000557884 TTLL12Q14166 644 aaPredicted RBP17.36■□□□□ 0.37
USP3-205ENST00000557884 FKBP1CQ5VVH2 108 aa17.36■□□□□ 0.37
USP3-205ENST00000557884 ZFPM1Q8IX07 1006 aa17.36■□□□□ 0.37
USP3-205ENST00000557884 KBTBD3Q8NAB2 608 aa17.36■□□□□ 0.37
USP3-205ENST00000557884 GBA2Q9HCG7 927 aaPredicted RBP17.36■□□□□ 0.37
USP3-205ENST00000557884 FZD1Q9UP38 647 aa17.36■□□□□ 0.37
USP3-205ENST00000557884 TCRBV5S4A2TA0A5A2 114 aa17.35■□□□□ 0.37
USP3-205ENST00000557884 NF2P35240 595 aa17.35■□□□□ 0.37
USP3-205ENST00000557884 ADD2P35612 726 aa17.35■□□□□ 0.37
USP3-205ENST00000557884 PPP4CP60510 307 aa17.35■□□□□ 0.37
USP3-205ENST00000557884 MOB2Q70IA6 237 aa17.35■□□□□ 0.37
USP3-205ENST00000557884 CENPQQ7L2Z9 268 aaPredicted RBP17.35■□□□□ 0.37
USP3-205ENST00000557884 FAM83AQ86UY5 434 aa17.35■□□□□ 0.37
USP3-205ENST00000557884 C2orf69Q8N8R5 385 aa17.35■□□□□ 0.37
USP3-205ENST00000557884 TEPSINQ96N21 525 aa17.35■□□□□ 0.37
USP3-205ENST00000557884 DDX4Q9NQI0 724 aaKnown RBP17.35■□□□□ 0.37
USP3-205ENST00000557884 MAST2Q6P0Q8 1798 aa17.35■□□□□ 0.37
USP3-205ENST00000557884 RFX7Q2KHR2 1363 aa17.34■□□□□ 0.37
USP3-205ENST00000557884 SUPT20HL1Q3ZLR7 823 aa17.34■□□□□ 0.37
USP3-205ENST00000557884 FAM151AQ8WW52 585 aa17.34■□□□□ 0.37
USP3-205ENST00000557884 FSD1Q9BTV5 496 aa17.34■□□□□ 0.37
USP3-205ENST00000557884 IDI2Q9BXS1 227 aa17.34■□□□□ 0.37
USP3-205ENST00000557884 SSC5DA1L4H1 1573 aa17.33■□□□□ 0.37
USP3-205ENST00000557884 MAGEB6P1A0A0J9YX57 407 aa17.33■□□□□ 0.36
USP3-205ENST00000557884 PLCG2P16885 1265 aa17.33■□□□□ 0.36
USP3-205ENST00000557884 HUNKP57058 714 aa17.33■□□□□ 0.36
USP3-205ENST00000557884 ZSCAN25Q6NSZ9 544 aa17.33■□□□□ 0.36
USP3-205ENST00000557884 TMED8Q6PL24 325 aaPredicted RBP17.33■□□□□ 0.36
USP3-205ENST00000557884 TGFBRAP1Q8WUH2 860 aa17.33■□□□□ 0.36
USP3-205ENST00000557884 MKRN1Q9UHC7 482 aaKnown RBP17.33■□□□□ 0.36
USP3-205ENST00000557884 TLL2Q9Y6L7 1015 aa17.33■□□□□ 0.36
USP3-205ENST00000557884 MYH2Q9UKX2 1941 aa17.33■□□□□ 0.36
USP3-205ENST00000557884 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
USP3-205ENST00000557884 UBE2Q2LH0YL09 131 aa17.32■□□□□ 0.36
USP3-205ENST00000557884 ENTPD3O75355 529 aa17.32■□□□□ 0.36
USP3-205ENST00000557884 PAXIP1Q6ZW49 1069 aaPredicted RBP17.32■□□□□ 0.36
USP3-205ENST00000557884 SAPCD2Q86UD0 394 aa17.32■□□□□ 0.36
USP3-205ENST00000557884 SKAP1Q86WV1 359 aa17.32■□□□□ 0.36
USP3-205ENST00000557884 MAPKAPK5Q8IW41 473 aa17.32■□□□□ 0.36
USP3-205ENST00000557884 ZSCAN29Q8IWY8 852 aaPredicted RBP17.32■□□□□ 0.36
USP3-205ENST00000557884 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
USP3-205ENST00000557884 OSBPL3Q9H4L5 887 aa17.32■□□□□ 0.36
USP3-205ENST00000557884 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.32■□□□□ 0.36
USP3-205ENST00000557884 POLR2AP24928 1970 aaKnown RBP17.31■□□□□ 0.36
USP3-205ENST00000557884 RNF113AO15541 343 aaKnown RBP17.31■□□□□ 0.36
USP3-205ENST00000557884 MBD4O95243 580 aa17.31■□□□□ 0.36
USP3-205ENST00000557884 UBE3CQ15386 1083 aa17.31■□□□□ 0.36
USP3-205ENST00000557884 SH3BP5LQ7L8J4 393 aa17.31■□□□□ 0.36
USP3-205ENST00000557884 LCORLQ8N3X6 602 aa17.31■□□□□ 0.36
USP3-205ENST00000557884 EVI5LQ96CN4 794 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms