RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 ZNF589Q86UQ0 364 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-213ENST00000557765 DHX36Q9H2U1 1008 aaKnown RBP12.5□□□□□ -0.41
GABRB3-213ENST00000557765 TTF2Q9UNY4 1162 aaKnown RBP12.5□□□□□ -0.41
GABRB3-213ENST00000557765 CHD4Q14839 1912 aa12.49□□□□□ -0.41
GABRB3-213ENST00000557765 MYO1BO43795 1136 aa12.49□□□□□ -0.41
GABRB3-213ENST00000557765 MBD4O95243 580 aa12.49□□□□□ -0.41
GABRB3-213ENST00000557765 CREB3L3Q68CJ9 461 aa12.49□□□□□ -0.41
GABRB3-213ENST00000557765 IFNL3Q8IZI9 196 aa12.49□□□□□ -0.41
GABRB3-213ENST00000557765 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
GABRB3-213ENST00000557765 KRT23Q9C075 422 aa12.49□□□□□ -0.41
GABRB3-213ENST00000557765 DBNDD1Q9H9R9 158 aa12.49□□□□□ -0.41
GABRB3-213ENST00000557765 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-213ENST00000557765 IQSEC3Q9UPP2 1182 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-213ENST00000557765 NDUFB9Q9Y6M9 179 aa12.49□□□□□ -0.41
GABRB3-213ENST00000557765 SLC4A4Q9Y6R1 1079 aa12.49□□□□□ -0.41
GABRB3-213ENST00000557765 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 WTIPA6NIX2 430 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-213ENST00000557765 M0R2C6 588 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 FGAP02671 866 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 APPP05067 770 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 VPS53Q5VIR6 699 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 TTC6Q86TZ1 520 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 GPC2Q8N158 579 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 TMTC2Q8N394 836 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 GMLQ99445 158 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 IDI2Q9BXS1 227 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 ZSWIM6Q9HCJ5 1215 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 TMOD2Q9NZR1 351 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 CYP46A1Q9Y6A2 500 aa12.48□□□□□ -0.41
GABRB3-213ENST00000557765 ROBO3Q96MS0 1386 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 DICER1Q9UPY3 1922 aaKnown RBP12.47□□□□□ -0.41
GABRB3-213ENST00000557765 GSG1L2A8MUP6 293 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 SLC27A2O14975 620 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 ENTPD3O75355 529 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 FGRP09769 529 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 USP17L8P0C7I0 530 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 TDO2P48775 406 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 PDE4BQ07343 736 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 BLOC1S2Q6QNY1 142 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 NLGN2Q8NFZ4 835 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
GABRB3-213ENST00000557765 ZSCAN31Q96LW9 406 aaPredicted RBP12.47□□□□□ -0.41
GABRB3-213ENST00000557765 ZNF277Q9NRM2 450 aaPredicted RBP12.47□□□□□ -0.41
GABRB3-213ENST00000557765 CRKP46108 304 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 RCAN1P53805 252 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 ZNF280AP59817 542 aaPredicted RBP12.46□□□□□ -0.41
GABRB3-213ENST00000557765 PTH1RQ03431 593 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 CXCL9Q07325 125 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 SART3Q15020 963 aaKnown RBP12.46□□□□□ -0.41
GABRB3-213ENST00000557765 PPP2R5BQ15173 497 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 DPY19L2Q6NUT2 758 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 OLFM4Q6UX06 510 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 RUFY3Q7L099 469 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 RALYLQ86SE5 291 aaKnown RBP12.46□□□□□ -0.41
GABRB3-213ENST00000557765 HSCBQ8IWL3 235 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 STAG1Q8WVM7 1258 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 NEK1Q96PY6 1258 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 SEC62Q99442 399 aaKnown RBP12.46□□□□□ -0.41
GABRB3-213ENST00000557765 EHD4Q9H223 541 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 DCP1AQ9NPI6 582 aaPredicted RBP12.46□□□□□ -0.41
GABRB3-213ENST00000557765 SWAP70Q9UH65 585 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 MKRN1Q9UHC7 482 aaKnown RBP12.46□□□□□ -0.41
GABRB3-213ENST00000557765 DAGLAQ9Y4D2 1042 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 SNX14Q9Y5W7 946 aa12.46□□□□□ -0.41
GABRB3-213ENST00000557765 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 CYP21A2P08686 494 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 MCM5P33992 734 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 BTDP43251 543 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 USP5P45974 858 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 MFSD6Q6ZSS7 791 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 DHX32Q7L7V1 743 aaKnown RBP12.45□□□□□ -0.42
GABRB3-213ENST00000557765 FAM83AQ86UY5 434 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 LCORLQ8N3X6 602 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 CERS5Q8N5B7 392 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 RGS22Q8NE09 1264 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 ZNF384Q8TF68 577 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 TMEM87BQ96K49 555 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 IPO9Q96P70 1041 aaKnown RBP12.45□□□□□ -0.42
GABRB3-213ENST00000557765 IL25Q9H293 177 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 SH2B1Q9NRF2 756 aaPredicted RBP12.45□□□□□ -0.42
GABRB3-213ENST00000557765 AATFQ9NY61 560 aaKnown RBP eCLIP12.45□□□□□ -0.42
GABRB3-213ENST00000557765 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
GABRB3-213ENST00000557765 LAMA4Q16363 1823 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 TIAM2Q8IVF5 1701 aa12.45□□□□□ -0.42
GABRB3-213ENST00000557765 ATRNL1Q5VV63 1379 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 ZNF646O15015 1829 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-213ENST00000557765 PSMD14O00487 310 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 ORC4O43929 436 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 HLA-DOAP06340 250 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 TNNI2P48788 182 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 RHBDL3P58872 404 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 DLGAP5Q15398 846 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 AKNAD1Q5T1N1 836 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 ARHGAP27Q6ZUM4 889 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 ESR2Q92731 530 aa12.44□□□□□ -0.42
GABRB3-213ENST00000557765 GPR101Q96P66 508 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-213ENST00000557765 KIF2CQ99661 725 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms