RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 HOXB4P17483 251 aaPredicted RBP6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 ARID5AQ03989 594 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 FAM160A1Q05DH4 1040 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 ZNF252P-AS1Q0IIN9 211 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 DIEXFQ68CQ4 756 aaKnown RBP6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 LLGL2Q6P1M3 1020 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 PDZD3Q86UT5 571 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 DTWD1Q8N5C7 304 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 GOLM1Q8NBJ4 401 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 DCAF11Q8TEB1 546 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 GPRASP2Q96D09 838 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 KLHDC7BQ96G42 594 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 EAF1Q96JC9 268 aaPredicted RBP6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 MIR1-1HGQ9H1L0 117 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 CBX8Q9HC52 389 aa6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 NOP53Q9NZM5 478 aaKnown RBP6.86□□□□□ -1.31
EFCAB11-213ENST00000557685 TM4SF5O14894 197 aa6.85□□□□□ -1.31
EFCAB11-213ENST00000557685 GSTP1P09211 210 aaKnown RBP6.85□□□□□ -1.31
EFCAB11-213ENST00000557685 POU4F3Q15319 338 aa6.85□□□□□ -1.31
EFCAB11-213ENST00000557685 SNAP47Q5SQN1 464 aa6.85□□□□□ -1.31
EFCAB11-213ENST00000557685 TRAPPC3LQ5T215 181 aa6.85□□□□□ -1.31
EFCAB11-213ENST00000557685 RASIP1Q5U651 963 aa6.85□□□□□ -1.31
EFCAB11-213ENST00000557685 GRIN3AQ8TCU5 1115 aa6.85□□□□□ -1.31
EFCAB11-213ENST00000557685 NRSN2Q9GZP1 204 aa6.85□□□□□ -1.31
EFCAB11-213ENST00000557685 PRKAG2Q9UGJ0 569 aa6.85□□□□□ -1.31
EFCAB11-213ENST00000557685 PCDHB5Q9Y5E4 795 aa6.85□□□□□ -1.31
EFCAB11-213ENST00000557685 TRIM37O94972 964 aa6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 ATF4P18848 351 aaPredicted RBP6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 FAM196AQ6ZSG2 479 aa6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 CD163Q86VB7 1156 aa6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 GALNT11Q8NCW6 608 aa6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 GATAD2BQ8WXI9 593 aa6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 SEC16BQ96JE7 1060 aa6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 CORO1BQ9BR76 489 aa6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 CARD10Q9BWT7 1032 aa6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 TANGO6Q9C0B7 1094 aa6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 CACNA2D2Q9NY47 1150 aa6.84□□□□□ -1.31
EFCAB11-213ENST00000557685 MAOBP27338 520 aa6.83□□□□□ -1.32
EFCAB11-213ENST00000557685 DNAJA1P31689 397 aaKnown RBP6.83□□□□□ -1.32
EFCAB11-213ENST00000557685 CD68P34810 354 aaPredicted RBP6.83□□□□□ -1.32
EFCAB11-213ENST00000557685 COL9A2Q14055 689 aaPredicted RBP6.83□□□□□ -1.32
EFCAB11-213ENST00000557685 JARID2Q92833 1246 aaPredicted RBP6.83□□□□□ -1.32
EFCAB11-213ENST00000557685 KCNB2Q92953 911 aa6.83□□□□□ -1.32
EFCAB11-213ENST00000557685 KRT82Q9NSB4 513 aa6.83□□□□□ -1.32
EFCAB11-213ENST00000557685 FAM221AA4D161 298 aa6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 DEAF1O75398 565 aaPredicted RBP6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 F13A1P00488 732 aa6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 ATP2B1P20020 1258 aa6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 CHRNA4P43681 627 aa6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 HNRNPUQ00839 825 aaKnown RBP eCLIP6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 APOBRQ0VD83 1088 aa6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 MAP1SQ66K74 1059 aaPredicted RBP6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 BNC2Q6ZN30 1099 aaPredicted RBP6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 FBXO11Q86XK2 927 aa6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 SLITRK4Q8IW52 837 aa6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 NKD1Q969G9 470 aa6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 LRRC3Q9BY71 257 aa6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 UBP1Q9NZI7 540 aa6.82□□□□□ -1.32
EFCAB11-213ENST00000557685 A0A0A0MRY4 1105 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 SPDYE3A6NKU9 549 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 CILPO75339 1184 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 RAC1P63000 192 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 SEPT6Q14141 434 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 MPP2Q14168 576 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 DOC2BQ14184 412 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 HP1BP3Q5SSJ5 553 aaPredicted RBP6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 MPRIPQ6WCQ1 1025 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 UBXN4Q92575 508 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 ARMC5Q96C12 935 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 TRIM11Q96F44 468 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 PLVAPQ9BX97 442 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 ZC3H12CQ9C0D7 883 aaKnown RBP6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 SEMA6BQ9H3T3 888 aa6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 PPP1R1BQ9UD71 204 aaPredicted RBP6.81□□□□□ -1.32
EFCAB11-213ENST00000557685 DLL1O00548 723 aa6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 ECEL1O95672 775 aa6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 CRKP46108 304 aa6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 SOX9P48436 509 aa6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 NLRP12P59046 1061 aa6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 PTPN11Q06124 597 aaPredicted RBP6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 FMR1NBQ8N0W7 255 aaPredicted RBP6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 GAL3ST3Q96A11 431 aa6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 CCDC86Q9H6F5 360 aaKnown RBP6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 EFR3BQ9Y2G0 817 aa6.8□□□□□ -1.32
EFCAB11-213ENST00000557685 LOC100289279A0A1B0GTE1 492 aa6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 DDX3YO15523 660 aaKnown RBP6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 ADAM11O75078 769 aa6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 BPNT1O95861 308 aa6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 GATA4P43694 442 aa6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 RPL6Q02878 288 aaKnown RBP6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 TRIM28Q13263 835 aaKnown RBP6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 CWF19L2Q2TBE0 894 aaKnown RBP6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 FOXD4L6Q3SYB3 417 aaPredicted RBP6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 FOXD4L3Q6VB84 417 aaPredicted RBP6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 MCF2L2Q86YR7 1114 aa6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 REXO1Q8N1G1 1221 aaKnown RBP6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 GPBAR1Q8TDU6 330 aa6.79□□□□□ -1.32
EFCAB11-213ENST00000557685 PSMG3-AS1Q96PY0 264 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms