RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ZSCAN25Q6NSZ9 544 aa18.46■□□□□ 0.55
NEDD1-213ENST00000557644 PUS7LQ9H0K6 701 aaKnown RBP18.46■□□□□ 0.55
NEDD1-213ENST00000557644 CACNB3P54284 484 aa18.45■□□□□ 0.54
NEDD1-213ENST00000557644 OSBP2Q969R2 916 aa18.45■□□□□ 0.54
NEDD1-213ENST00000557644 SEC62Q99442 399 aaKnown RBP18.45■□□□□ 0.54
NEDD1-213ENST00000557644 IGSF3O75054 1194 aa18.45■□□□□ 0.54
NEDD1-213ENST00000557644 CDC42EP5Q6NZY7 148 aa18.45■□□□□ 0.54
NEDD1-213ENST00000557644 PNMA8AQ86V59 439 aaPredicted RBP18.45■□□□□ 0.54
NEDD1-213ENST00000557644 FAM227BQ96M60 508 aa18.45■□□□□ 0.54
NEDD1-213ENST00000557644 ZFYP08048 801 aaPredicted RBP18.44■□□□□ 0.54
NEDD1-213ENST00000557644 KIF3CO14782 793 aa18.44■□□□□ 0.54
NEDD1-213ENST00000557644 RHBDL3P58872 404 aa18.44■□□□□ 0.54
NEDD1-213ENST00000557644 APPBP2Q92624 585 aa18.44■□□□□ 0.54
NEDD1-213ENST00000557644 USP40Q9NVE5 1235 aa18.44■□□□□ 0.54
NEDD1-213ENST00000557644 GGA3Q9NZ52 723 aa18.44■□□□□ 0.54
NEDD1-213ENST00000557644 MYH7P12883 1935 aa18.43■□□□□ 0.54
NEDD1-213ENST00000557644 A0A0D9SFI3 127 aa18.43■□□□□ 0.54
NEDD1-213ENST00000557644 LRRFIP1Q32MZ4 808 aaKnown RBP18.43■□□□□ 0.54
NEDD1-213ENST00000557644 ZMYM1Q5SVZ6 1142 aa18.43■□□□□ 0.54
NEDD1-213ENST00000557644 ANGEL2Q5VTE6 544 aaKnown RBP18.43■□□□□ 0.54
NEDD1-213ENST00000557644 SH3RF3Q8TEJ3 882 aaPredicted RBP18.43■□□□□ 0.54
NEDD1-213ENST00000557644 RIOK1Q9BRS2 568 aaKnown RBP18.43■□□□□ 0.54
NEDD1-213ENST00000557644 ZNF70Q9UC06 446 aaPredicted RBP18.43■□□□□ 0.54
NEDD1-213ENST00000557644 M0R2C6 588 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 NMIQ13287 307 aaPredicted RBP18.42■□□□□ 0.54
NEDD1-213ENST00000557644 LCORLQ8N3X6 602 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 VEZTQ9HBM0 779 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 CLEC11AQ9Y240 323 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 MAGEB6P1A0A0J9YX57 407 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 MYO1BO43795 1136 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 MBD4O95243 580 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 BAG3O95817 575 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 PPP4CP60510 307 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 SPDYE2Q495Y8 402 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 ARMT1Q9H993 441 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 AK9Q5TCS8 1911 aa18.42■□□□□ 0.54
NEDD1-213ENST00000557644 NFIAQ12857 509 aa18.41■□□□□ 0.54
NEDD1-213ENST00000557644 TMED8Q6PL24 325 aaPredicted RBP18.41■□□□□ 0.54
NEDD1-213ENST00000557644 CWC27Q6UX04 472 aaKnown RBP18.41■□□□□ 0.54
NEDD1-213ENST00000557644 CCDC129Q6ZRS4 1044 aa18.41■□□□□ 0.54
NEDD1-213ENST00000557644 NOL10Q9BSC4 688 aaKnown RBP18.41■□□□□ 0.54
NEDD1-213ENST00000557644 RFX7Q2KHR2 1363 aa18.41■□□□□ 0.54
NEDD1-213ENST00000557644 DIAPH3Q9NSV4 1193 aa18.41■□□□□ 0.54
NEDD1-213ENST00000557644 CHMLP26374 656 aa18.4■□□□□ 0.54
NEDD1-213ENST00000557644 AIDAQ96BJ3 306 aa18.4■□□□□ 0.54
NEDD1-213ENST00000557644 IL25Q9H293 177 aa18.4■□□□□ 0.54
NEDD1-213ENST00000557644 TCP10L2B9ZVM9 353 aa18.4■□□□□ 0.54
NEDD1-213ENST00000557644 WDHD1O75717 1129 aaPredicted RBP18.4■□□□□ 0.54
NEDD1-213ENST00000557644 MAP1SQ66K74 1059 aaPredicted RBP18.4■□□□□ 0.54
NEDD1-213ENST00000557644 DLK2Q6UY11 383 aa18.4■□□□□ 0.54
NEDD1-213ENST00000557644 GPAA1O43292 621 aa18.39■□□□□ 0.53
NEDD1-213ENST00000557644 LDHDQ86WU2 507 aa18.39■□□□□ 0.53
NEDD1-213ENST00000557644 TEX11Q8IYF3 940 aa18.39■□□□□ 0.53
NEDD1-213ENST00000557644 ZC3H15Q8WU90 426 aaKnown RBP18.39■□□□□ 0.53
NEDD1-213ENST00000557644 DDX4Q9NQI0 724 aaKnown RBP18.39■□□□□ 0.53
NEDD1-213ENST00000557644 PGAP2Q9UHJ9 254 aa18.39■□□□□ 0.53
NEDD1-213ENST00000557644 PRKAB2O43741 272 aa18.39■□□□□ 0.53
NEDD1-213ENST00000557644 PICALMQ13492 652 aa18.39■□□□□ 0.53
NEDD1-213ENST00000557644 ZNF589Q86UQ0 364 aaPredicted RBP18.39■□□□□ 0.53
NEDD1-213ENST00000557644 TICAM2Q86XR7 235 aa18.39■□□□□ 0.53
NEDD1-213ENST00000557644 TCP10Q12799 353 aa18.38■□□□□ 0.53
NEDD1-213ENST00000557644 TGFBRAP1Q8WUH2 860 aa18.38■□□□□ 0.53
NEDD1-213ENST00000557644 STRBPQ96SI9 672 aaKnown RBP18.38■□□□□ 0.53
NEDD1-213ENST00000557644 HELLSQ9NRZ9 838 aa18.38■□□□□ 0.53
NEDD1-213ENST00000557644 FAM198AQ9UFP1 575 aa18.38■□□□□ 0.53
NEDD1-213ENST00000557644 HIP1O00291 1037 aa18.38■□□□□ 0.53
NEDD1-213ENST00000557644 PLCG2P16885 1265 aa18.38■□□□□ 0.53
NEDD1-213ENST00000557644 MCMDC2Q4G0Z9 681 aa18.38■□□□□ 0.53
NEDD1-213ENST00000557644 ZFPM1Q8IX07 1006 aa18.38■□□□□ 0.53
NEDD1-213ENST00000557644 SDR42E1Q8WUS8 393 aa18.38■□□□□ 0.53
NEDD1-213ENST00000557644 DCPSQ96C86 337 aaKnown RBP18.38■□□□□ 0.53
NEDD1-213ENST00000557644 TMOD2Q9NZR1 351 aa18.38■□□□□ 0.53
NEDD1-213ENST00000557644 ADM5C9JUS6 153 aa18.37■□□□□ 0.53
NEDD1-213ENST00000557644 PRAMEF18Q5VWM3 479 aa18.37■□□□□ 0.53
NEDD1-213ENST00000557644 KRT26Q7Z3Y9 468 aa18.37■□□□□ 0.53
NEDD1-213ENST00000557644 MAPKAPK5Q8IW41 473 aa18.37■□□□□ 0.53
NEDD1-213ENST00000557644 IDI2Q9BXS1 227 aa18.37■□□□□ 0.53
NEDD1-213ENST00000557644 GLIS2Q9BZE0 524 aaPredicted RBP18.37■□□□□ 0.53
NEDD1-213ENST00000557644 USP48Q86UV5 1035 aa18.36■□□□□ 0.53
NEDD1-213ENST00000557644 CDAN1Q8IWY9 1227 aa18.36■□□□□ 0.53
NEDD1-213ENST00000557644 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
NEDD1-213ENST00000557644 PITPNM2Q9BZ72 1349 aa18.36■□□□□ 0.53
NEDD1-213ENST00000557644 CNTNAP1P78357 1384 aa18.36■□□□□ 0.53
NEDD1-213ENST00000557644 POLR2AP24928 1970 aaKnown RBP18.36■□□□□ 0.53
NEDD1-213ENST00000557644 ECM29Q5VYK3 1845 aa18.36■□□□□ 0.53
NEDD1-213ENST00000557644 CDC45O75419 566 aa18.35■□□□□ 0.53
NEDD1-213ENST00000557644 RASA3Q14644 834 aa18.35■□□□□ 0.53
NEDD1-213ENST00000557644 VPS53Q5VIR6 699 aa18.35■□□□□ 0.53
NEDD1-213ENST00000557644 APOBEC3FQ8IUX4 373 aaKnown RBP18.35■□□□□ 0.53
NEDD1-213ENST00000557644 CRNKL1Q9BZJ0 848 aaKnown RBP18.35■□□□□ 0.53
NEDD1-213ENST00000557644 TMEM39BQ9GZU3 492 aa18.35■□□□□ 0.53
NEDD1-213ENST00000557644 SLC4A4Q9Y6R1 1079 aa18.35■□□□□ 0.53
NEDD1-213ENST00000557644 USP5P45974 858 aa18.35■□□□□ 0.53
NEDD1-213ENST00000557644 FMR1Q06787 632 aaKnown RBP eCLIP18.35■□□□□ 0.53
NEDD1-213ENST00000557644 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
NEDD1-213ENST00000557644 SULF1Q8IWU6 871 aa18.35■□□□□ 0.53
NEDD1-213ENST00000557644 FLT1P17948 1338 aa18.35■□□□□ 0.53
NEDD1-213ENST00000557644 FKBP1CQ5VVH2 108 aa18.34■□□□□ 0.53
NEDD1-213ENST00000557644 CHADLQ6NUI6 762 aa18.34■□□□□ 0.53
NEDD1-213ENST00000557644 TRAF5O00463 557 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms