RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 UPF3BQ9BZI7 483 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 NAPBQ9H115 298 aa17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 ZSWIM6Q9HCJ5 1215 aa17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 KCNQ5Q9NR82 932 aa17.24■□□□□ 0.35
ARHGEF40-208ENST00000557498 GAKO14976 1311 aa17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 BAG3O95817 575 aa17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 PPP4CP60510 307 aa17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 CERS3Q8IU89 383 aa17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 NIM1KQ8IY84 436 aa17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 FAM163AQ96GL9 167 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 CRNKL1Q9BZJ0 848 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 FHDC1Q9C0D6 1143 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 DAXXQ9UER7 740 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 LAMB1P07942 1786 aa17.23■□□□□ 0.35
ARHGEF40-208ENST00000557498 GPR75-ASB3A0A0A6YYF3 556 aa17.22■□□□□ 0.35
ARHGEF40-208ENST00000557498 ZNF213O14771 459 aa17.22■□□□□ 0.35
ARHGEF40-208ENST00000557498 TDO2P48775 406 aa17.22■□□□□ 0.35
ARHGEF40-208ENST00000557498 STOX1Q6ZVD7 989 aa17.22■□□□□ 0.35
ARHGEF40-208ENST00000557498 SDR42E1Q8WUS8 393 aa17.22■□□□□ 0.35
ARHGEF40-208ENST00000557498 TTC14Q96N46 770 aa17.22■□□□□ 0.35
ARHGEF40-208ENST00000557498 TTF2Q9UNY4 1162 aaKnown RBP17.22■□□□□ 0.35
ARHGEF40-208ENST00000557498 CYP46A1Q9Y6A2 500 aa17.22■□□□□ 0.35
ARHGEF40-208ENST00000557498 ADAMTSL1Q8N6G6 1762 aa17.22■□□□□ 0.35
ARHGEF40-208ENST00000557498 NAV1Q8NEY1 1877 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 CDK5RAP2Q96SN8 1893 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 F8W031 263 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 BTDP43251 543 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 SLC4A3P48751 1232 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 MCM2P49736 904 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 HAND2P61296 217 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 GIMAP6Q6P9H5 292 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 BLOC1S2Q6QNY1 142 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 RUFY3Q7L099 469 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 NEK1Q96PY6 1258 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 DAGLAQ9Y4D2 1042 aa17.21■□□□□ 0.35
ARHGEF40-208ENST00000557498 E7EWF7 191 aa17.2■□□□□ 0.34
ARHGEF40-208ENST00000557498 CPA1P15085 419 aa17.2■□□□□ 0.34
ARHGEF40-208ENST00000557498 RPS6KB1P23443 525 aa17.2■□□□□ 0.34
ARHGEF40-208ENST00000557498 SH3RF3Q8TEJ3 882 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-208ENST00000557498 ZNRF3Q9ULT6 936 aa17.2■□□□□ 0.34
ARHGEF40-208ENST00000557498 MYO3BQ8WXR4 1341 aa17.2■□□□□ 0.34
ARHGEF40-208ENST00000557498 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-208ENST00000557498 FOCADQ5VW36 1801 aa17.19■□□□□ 0.34
ARHGEF40-208ENST00000557498 DDX60LQ5H9U9 1706 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-208ENST00000557498 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-208ENST00000557498 PLCG2P16885 1265 aa17.19■□□□□ 0.34
ARHGEF40-208ENST00000557498 RASSF7Q02833 373 aa17.19■□□□□ 0.34
ARHGEF40-208ENST00000557498 HHIPL2Q6UWX4 724 aa17.19■□□□□ 0.34
ARHGEF40-208ENST00000557498 NBPF3Q9H094 633 aa17.19■□□□□ 0.34
ARHGEF40-208ENST00000557498 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
ARHGEF40-208ENST00000557498 PDRG1Q9NUG6 133 aa17.19■□□□□ 0.34
ARHGEF40-208ENST00000557498 HDLBPQ00341 1268 aaKnown RBP17.18■□□□□ 0.34
ARHGEF40-208ENST00000557498 RSBN1LQ6PCB5 846 aaPredicted RBP17.18■□□□□ 0.34
ARHGEF40-208ENST00000557498 TBC1D10CQ8IV04 446 aa17.18■□□□□ 0.34
ARHGEF40-208ENST00000557498 KIAA0825Q8IV33 1275 aa17.18■□□□□ 0.34
ARHGEF40-208ENST00000557498 TEKT1Q969V4 418 aa17.18■□□□□ 0.34
ARHGEF40-208ENST00000557498 MRIQ9BWK5 157 aa17.18■□□□□ 0.34
ARHGEF40-208ENST00000557498 RAD17O75943 681 aa17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 VIL1P09327 827 aaKnown RBP17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 USP5P45974 858 aa17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 CRKP46108 304 aa17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 SCNN1DP51172 638 aa17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 AK2P54819 239 aa17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 COL9A3Q14050 684 aaPredicted RBP17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 SYT17Q9BSW7 474 aa17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 DCP1AQ9NPI6 582 aaPredicted RBP17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 ARPP21Q9UBL0 812 aaPredicted RBP17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 ANAPC4Q9UJX5 808 aa17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 ECM29Q5VYK3 1845 aa17.17■□□□□ 0.34
ARHGEF40-208ENST00000557498 PSMD14O00487 310 aa17.16■□□□□ 0.34
ARHGEF40-208ENST00000557498 RHBDL3P58872 404 aa17.16■□□□□ 0.34
ARHGEF40-208ENST00000557498 PPARAQ07869 468 aa17.16■□□□□ 0.34
ARHGEF40-208ENST00000557498 TEX11Q8IYF3 940 aa17.16■□□□□ 0.34
ARHGEF40-208ENST00000557498 NCOA7Q8NI08 942 aa17.16■□□□□ 0.34
ARHGEF40-208ENST00000557498 ZDHHC15Q96MV8 337 aa17.16■□□□□ 0.34
ARHGEF40-208ENST00000557498 ALDH8A1Q9H2A2 487 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF40-208ENST00000557498 CTDSPL2Q05D32 466 aa17.15■□□□□ 0.34
ARHGEF40-208ENST00000557498 SBK1Q52WX2 424 aa17.15■□□□□ 0.34
ARHGEF40-208ENST00000557498 CTR9Q6PD62 1173 aa17.15■□□□□ 0.34
ARHGEF40-208ENST00000557498 DHX32Q7L7V1 743 aaKnown RBP17.15■□□□□ 0.34
ARHGEF40-208ENST00000557498 RALYLQ86SE5 291 aaKnown RBP17.15■□□□□ 0.34
ARHGEF40-208ENST00000557498 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
ARHGEF40-208ENST00000557498 GMLQ99445 158 aa17.15■□□□□ 0.34
ARHGEF40-208ENST00000557498 MKRN1Q9UHC7 482 aaKnown RBP17.15■□□□□ 0.34
ARHGEF40-208ENST00000557498 SERPINA10Q9UK55 444 aa17.15■□□□□ 0.34
ARHGEF40-208ENST00000557498 MINDY4BA8MYZ0 360 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 USP17L12C9JPN9 530 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 USP17L21D6R901 530 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 PRELPP51888 382 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 CXCL9Q07325 125 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 TRDNQ13061 729 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 ANKRD1Q15327 319 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 AKNAD1Q5T1N1 836 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 CIAPIN1Q6FI81 312 aa17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 NOL8Q76FK4 1167 aaKnown RBP17.14■□□□□ 0.33
ARHGEF40-208ENST00000557498 MB21D2Q8IYB1 491 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms