RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CTSWP56202 376 aa12.26□□□□□ -0.45
NEDD1-211ENST00000557454 TRIM32Q13049 653 aa12.26□□□□□ -0.45
NEDD1-211ENST00000557454 KRT24Q2M2I5 525 aa12.26□□□□□ -0.45
NEDD1-211ENST00000557454 GREM2Q9H772 168 aa12.26□□□□□ -0.45
NEDD1-211ENST00000557454 ARAP2Q8WZ64 1704 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 MGAMO43451 1857 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 DLG5Q8TDM6 1919 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 HMGCRP04035 888 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 COL6A1P12109 1028 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 TNNI2P48788 182 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 SHHQ15465 462 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 NFE2L2Q16236 605 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 C9orf50Q5SZB4 431 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 ATXN2LQ8WWM7 1075 aaKnown RBP12.25□□□□□ -0.45
NEDD1-211ENST00000557454 ASB2Q96Q27 587 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 KCNH4Q9UQ05 1017 aa12.25□□□□□ -0.45
NEDD1-211ENST00000557454 NEFMP07197 916 aa12.24□□□□□ -0.45
NEDD1-211ENST00000557454 INPP5BP32019 993 aa12.24□□□□□ -0.45
NEDD1-211ENST00000557454 KCNJ4P48050 445 aa12.24□□□□□ -0.45
NEDD1-211ENST00000557454 FKBP1AP62942 108 aaKnown RBP12.24□□□□□ -0.45
NEDD1-211ENST00000557454 SMAD3P84022 425 aaKnown RBP12.24□□□□□ -0.45
NEDD1-211ENST00000557454 GPAT2Q6NUI2 795 aa12.24□□□□□ -0.45
NEDD1-211ENST00000557454 MYD88Q99836 296 aa12.24□□□□□ -0.45
NEDD1-211ENST00000557454 LRFN3Q9BTN0 628 aa12.24□□□□□ -0.45
NEDD1-211ENST00000557454 SPEF2Q9C093 1822 aa12.24□□□□□ -0.45
NEDD1-211ENST00000557454 HMX1Q9NP08 348 aaPredicted RBP12.24□□□□□ -0.45
NEDD1-211ENST00000557454 SNAP23O00161 211 aa12.23□□□□□ -0.45
NEDD1-211ENST00000557454 CACNB3P54284 484 aa12.23□□□□□ -0.45
NEDD1-211ENST00000557454 HDGFL1Q5TGJ6 251 aa12.23□□□□□ -0.45
NEDD1-211ENST00000557454 DZIP1LQ8IYY4 767 aaKnown RBP12.23□□□□□ -0.45
NEDD1-211ENST00000557454 COA7Q96BR5 231 aa12.23□□□□□ -0.45
NEDD1-211ENST00000557454 NECAB3Q96P71 396 aaPredicted RBP12.23□□□□□ -0.45
NEDD1-211ENST00000557454 THEGQ9P2T0 379 aa12.23□□□□□ -0.45
NEDD1-211ENST00000557454 GRIN2CQ14957 1233 aa12.22□□□□□ -0.45
NEDD1-211ENST00000557454 RIC3Q7Z5B4 369 aa12.22□□□□□ -0.45
NEDD1-211ENST00000557454 TTLL11Q8NHH1 800 aa12.22□□□□□ -0.45
NEDD1-211ENST00000557454 PPM1EQ8WY54 764 aa12.22□□□□□ -0.45
NEDD1-211ENST00000557454 ANKRD2Q9GZV1 360 aa12.22□□□□□ -0.45
NEDD1-211ENST00000557454 SERPINA10Q9UK55 444 aa12.22□□□□□ -0.45
NEDD1-211ENST00000557454 XIRP2A4UGR9 3374 aa12.22□□□□□ -0.45
NEDD1-211ENST00000557454 IL1R1P14778 569 aa12.21□□□□□ -0.45
NEDD1-211ENST00000557454 IGHMBP2P38935 993 aaKnown RBP12.21□□□□□ -0.45
NEDD1-211ENST00000557454 CCDC191Q8NCU4 936 aa12.21□□□□□ -0.45
NEDD1-211ENST00000557454 IL27Q8NEV9 243 aa12.21□□□□□ -0.45
NEDD1-211ENST00000557454 CWC25Q9NXE8 425 aaPredicted RBP12.21□□□□□ -0.45
NEDD1-211ENST00000557454 TTF2Q9UNY4 1162 aaKnown RBP12.21□□□□□ -0.45
NEDD1-211ENST00000557454 MRPS5P82675 430 aaKnown RBP12.2□□□□□ -0.46
NEDD1-211ENST00000557454 CHRNDQ07001 517 aa12.2□□□□□ -0.46
NEDD1-211ENST00000557454 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
NEDD1-211ENST00000557454 MIGA2Q7L4E1 593 aa12.2□□□□□ -0.46
NEDD1-211ENST00000557454 PLEKHF1Q96S99 279 aa12.2□□□□□ -0.46
NEDD1-211ENST00000557454 ZNF341Q9BYN7 854 aa12.2□□□□□ -0.46
NEDD1-211ENST00000557454 DBF4Q9UBU7 674 aaPredicted RBP12.2□□□□□ -0.46
NEDD1-211ENST00000557454 CRKP46108 304 aa12.19□□□□□ -0.46
NEDD1-211ENST00000557454 DCAF15Q66K64 600 aa12.19□□□□□ -0.46
NEDD1-211ENST00000557454 ZNF804AQ7Z570 1209 aa12.19□□□□□ -0.46
NEDD1-211ENST00000557454 SMCR8Q8TEV9 937 aaPredicted RBP12.19□□□□□ -0.46
NEDD1-211ENST00000557454 BABAM1Q9NWV8 329 aa12.19□□□□□ -0.46
NEDD1-211ENST00000557454 HYPKQ9NX55 129 aa12.19□□□□□ -0.46
NEDD1-211ENST00000557454 PRKAG2Q9UGJ0 569 aa12.19□□□□□ -0.46
NEDD1-211ENST00000557454 PRKAR2AP13861 404 aaKnown RBP12.18□□□□□ -0.46
NEDD1-211ENST00000557454 MFSD14BQ5SR56 506 aa12.18□□□□□ -0.46
NEDD1-211ENST00000557454 POTEEQ6S8J3 1075 aa12.18□□□□□ -0.46
NEDD1-211ENST00000557454 ANKRD13CQ8N6S4 541 aa12.18□□□□□ -0.46
NEDD1-211ENST00000557454 TRIB2Q92519 343 aa12.18□□□□□ -0.46
NEDD1-211ENST00000557454 EPHX3Q9H6B9 360 aa12.18□□□□□ -0.46
NEDD1-211ENST00000557454 DOCK3Q8IZD9 2030 aa12.17□□□□□ -0.46
NEDD1-211ENST00000557454 TAF5LO75529 589 aa12.17□□□□□ -0.46
NEDD1-211ENST00000557454 MRE11P49959 708 aa12.17□□□□□ -0.46
NEDD1-211ENST00000557454 TMEM31Q5JXX7 168 aa12.17□□□□□ -0.46
NEDD1-211ENST00000557454 MAP3K21Q5TCX8 1036 aa12.17□□□□□ -0.46
NEDD1-211ENST00000557454 GADL1Q6ZQY3 521 aa12.17□□□□□ -0.46
NEDD1-211ENST00000557454 C15orf52Q6ZUT6 534 aaKnown RBP12.17□□□□□ -0.46
NEDD1-211ENST00000557454 HOOK2Q96ED9 719 aa12.17□□□□□ -0.46
NEDD1-211ENST00000557454 MPHOSPH8Q99549 860 aa12.17□□□□□ -0.46
NEDD1-211ENST00000557454 MAST2Q6P0Q8 1798 aa12.17□□□□□ -0.46
NEDD1-211ENST00000557454 LTBP2Q14767 1821 aa12.16□□□□□ -0.46
NEDD1-211ENST00000557454 A0A0G2JLL6 359 aaPredicted RBP12.16□□□□□ -0.46
NEDD1-211ENST00000557454 CXCL11O14625 94 aa12.16□□□□□ -0.46
NEDD1-211ENST00000557454 PPP2R1AP30153 589 aa12.16□□□□□ -0.46
NEDD1-211ENST00000557454 ATN1P54259 1190 aaPredicted RBP12.16□□□□□ -0.46
NEDD1-211ENST00000557454 PDE3AQ14432 1141 aa12.16□□□□□ -0.46
NEDD1-211ENST00000557454 PRRT2Q7Z6L0 340 aaPredicted RBP12.16□□□□□ -0.46
NEDD1-211ENST00000557454 P2RX7Q99572 595 aaKnown RBP12.16□□□□□ -0.46
NEDD1-211ENST00000557454 SENP6Q9GZR1 1112 aaPredicted RBP12.16□□□□□ -0.46
NEDD1-211ENST00000557454 RPAP1Q9BWH6 1393 aaPredicted RBP12.16□□□□□ -0.46
NEDD1-211ENST00000557454 MAPK8IP3Q9UPT6 1336 aa12.15□□□□□ -0.46
NEDD1-211ENST00000557454 ITGA6P23229 1130 aa12.15□□□□□ -0.46
NEDD1-211ENST00000557454 DNAJB2P25686 324 aa12.15□□□□□ -0.46
NEDD1-211ENST00000557454 FAM110CQ1W6H9 321 aa12.15□□□□□ -0.46
NEDD1-211ENST00000557454 NOL9Q5SY16 702 aaKnown RBP12.15□□□□□ -0.46
NEDD1-211ENST00000557454 FASTKD5Q7L8L6 764 aaKnown RBP12.15□□□□□ -0.46
NEDD1-211ENST00000557454 PHAXQ9H814 394 aaKnown RBP12.15□□□□□ -0.46
NEDD1-211ENST00000557454 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
NEDD1-211ENST00000557454 GJD2Q9UKL4 321 aa12.15□□□□□ -0.46
NEDD1-211ENST00000557454 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
NEDD1-211ENST00000557454 SLC45A1Q9Y2W3 748 aa12.15□□□□□ -0.46
NEDD1-211ENST00000557454 HOXB7P09629 217 aa12.14□□□□□ -0.47
NEDD1-211ENST00000557454 RTP1P59025 263 aa12.14□□□□□ -0.47
NEDD1-211ENST00000557454 CCDC85BQ15834 202 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms