RNA–Protein interactions for RNA: ENST00000557410.5

SV2B-206, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 1 (best)

Gene SV2B, Length 4,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-206ENST00000557410 PDIA3P30101 505 aaKnown RBP9.06□□□□□ -0.96
SV2B-206ENST00000557410 RFC4P35249 363 aa9.06□□□□□ -0.96
SV2B-206ENST00000557410 IARSP41252 1262 aaKnown RBP9.06□□□□□ -0.96
SV2B-206ENST00000557410 SYKP43405 635 aa9.06□□□□□ -0.96
SV2B-206ENST00000557410 EIF5P55010 431 aaKnown RBP9.06□□□□□ -0.96
SV2B-206ENST00000557410 TCIRG1Q13488 830 aa9.06□□□□□ -0.96
SV2B-206ENST00000557410 CCDC102BQ68D86 513 aa9.06□□□□□ -0.96
SV2B-206ENST00000557410 KCNF1Q9H3M0 494 aa9.06□□□□□ -0.96
SV2B-206ENST00000557410 LAMA4Q16363 1823 aa9.06□□□□□ -0.96
SV2B-206ENST00000557410 SLU7O95391 586 aaKnown RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 IGHMBP2P38935 993 aaKnown RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 EPS15P42566 896 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 IFIT5Q13325 482 aaKnown RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 STIM1Q13586 685 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 TICAM2Q86XR7 235 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 WASF1Q92558 559 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 ZNF274Q96GC6 653 aaPredicted RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 CARD10Q9BWT7 1032 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 RAI14Q9P0K7 980 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 GOLGA8AA7E2F4 631 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 CCDC181Q5TID7 509 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 RBM43Q6ZSC3 357 aaKnown RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 KIAA1524Q8TCG1 905 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 CERKQ8TCT0 537 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 USP28Q96RU2 1077 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 SPTLC3Q9NUV7 552 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 SLC12A7Q9Y666 1083 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 SAMD1Q6SPF0 538 aaPredicted RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 KIAA1328Q86T90 577 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 ISCA1Q9BUE6 129 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 GNL3LQ9NVN8 582 aaKnown RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 TRPC5Q9UL62 973 aaPredicted RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 PARP4Q9UKK3 1724 aaKnown RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 ZFYP08048 801 aaPredicted RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 LDHAL6AQ6ZMR3 332 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 CCDC150Q8NCX0 1101 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.05□□□□□ -0.96
SV2B-206ENST00000557410 CDK5RAP3Q96JB5 506 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 ZFP91Q96JP5 570 aaPredicted RBP9.05□□□□□ -0.96
SV2B-206ENST00000557410 CENPHQ9H3R5 247 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 IFNKQ9P0W0 207 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 RCOR1Q9UKL0 485 aa9.05□□□□□ -0.96
SV2B-206ENST00000557410 DCAF8L1A6NGE4 600 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 GLI3P10071 1580 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 ZAP70P43403 619 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 ZNF75DP51815 510 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 SYT10Q6XYQ8 523 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 TDRD7Q8NHU6 1098 aaKnown RBP9.04□□□□□ -0.96
SV2B-206ENST00000557410 CCDC12Q8WUD4 166 aaPredicted RBP9.04□□□□□ -0.96
SV2B-206ENST00000557410 AGXT2Q9BYV1 514 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 GPHNQ9NQX3 736 aaPredicted RBP9.04□□□□□ -0.96
SV2B-206ENST00000557410 STRCP1A6NGW2 1772 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 A0A1B0GVL5 298 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 ADD1P35611 737 aaKnown RBP9.04□□□□□ -0.96
SV2B-206ENST00000557410 NKX1-1Q15270 411 aaPredicted RBP9.04□□□□□ -0.96
SV2B-206ENST00000557410 CRACR2AQ9BSW2 395 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 TANGO6Q9C0B7 1094 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 NUP188Q5SRE5 1749 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 PRC1O43663 620 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 LMAN1P49257 510 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 METAP2P50579 478 aaKnown RBP eCLIP9.04□□□□□ -0.96
SV2B-206ENST00000557410 ATL3Q6DD88 541 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 DNAJC10Q8IXB1 793 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 NCOA7Q8NI08 942 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 TJP1Q07157 1748 aa9.04□□□□□ -0.96
SV2B-206ENST00000557410 CARMIL3Q8ND23 1372 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 SPTLC2O15270 562 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 FGAP02671 866 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 SCARF1Q14162 830 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 SMAP1Q8IYB5 467 aaPredicted RBP9.03□□□□□ -0.96
SV2B-206ENST00000557410 KCNG4Q8TDN1 519 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 SLC26A6Q9BXS9 759 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 GOLPH3LQ9H4A5 285 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 ZHX3Q9H4I2 956 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 RNF216Q9NWF9 866 aaPredicted RBP9.03□□□□□ -0.96
SV2B-206ENST00000557410 NRBP1Q9UHY1 535 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 CEP131Q9UPN4 1083 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 KCPQ6ZWJ8 1503 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 PCCAP05165 728 aaPredicted RBP9.03□□□□□ -0.96
SV2B-206ENST00000557410 ATP2B3Q16720 1220 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 TMEM67Q5HYA8 995 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 OTUD7BQ6GQQ9 843 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 PI16Q6UXB8 463 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 APPBP2Q92624 585 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 ALG1Q9BT22 464 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 SSBP05455 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
SV2B-206ENST00000557410 CDR1P51861 262 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 FAM160A1Q05DH4 1040 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 SSRP1Q08945 709 aaKnown RBP9.03□□□□□ -0.96
SV2B-206ENST00000557410 LRMPQ12912 555 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 MCM6Q14566 821 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 NUP88Q99567 741 aaPredicted RBP9.03□□□□□ -0.96
SV2B-206ENST00000557410 GTPBP4Q9BZE4 634 aaKnown RBP9.03□□□□□ -0.96
SV2B-206ENST00000557410 BCL2L12Q9HB09 334 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 FBXO3Q9UK99 471 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 ASAP1Q9ULH1 1129 aa9.03□□□□□ -0.96
SV2B-206ENST00000557410 COL5A2P05997 1499 aaPredicted RBP9.03□□□□□ -0.96
SV2B-206ENST00000557410 CCDC196A0A1B0GTZ2 297 aa9.02□□□□□ -0.96
SV2B-206ENST00000557410 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.02□□□□□ -0.96
SV2B-206ENST00000557410 PLA2G4DQ86XP0 818 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms