RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 CABP4P57796 275 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 TBCELQ5QJ74 424 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 HOMEZQ8IX15 550 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 LARGE2Q8N3Y3 721 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 TTLL6Q8N841 843 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 GTPBP3Q969Y2 492 aaKnown RBP6.67□□□□□ -1.34
ATXN3-247ENST00000557311 ANP32EQ9BTT0 268 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 SRP68Q9UHB9 627 aaKnown RBP6.67□□□□□ -1.34
ATXN3-247ENST00000557311 KIAA1024Q9UPX6 916 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 GJA3Q9Y6H8 435 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 FAM208AQ9UK61 1670 aaKnown RBP6.67□□□□□ -1.34
ATXN3-247ENST00000557311 LTN1O94822 1766 aa6.67□□□□□ -1.34
ATXN3-247ENST00000557311 C5P01031 1676 aa6.66□□□□□ -1.34
ATXN3-247ENST00000557311 GPR25O00155 361 aa6.66□□□□□ -1.34
ATXN3-247ENST00000557311 POLRMTO00411 1230 aaKnown RBP6.66□□□□□ -1.34
ATXN3-247ENST00000557311 FOXN1O15353 648 aa6.66□□□□□ -1.34
ATXN3-247ENST00000557311 CRKLP46109 303 aaKnown RBP6.66□□□□□ -1.34
ATXN3-247ENST00000557311 PLEKHO1Q53GL0 409 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-247ENST00000557311 ARSJQ5FYB0 599 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-247ENST00000557311 WDR44Q5JSH3 913 aa6.66□□□□□ -1.34
ATXN3-247ENST00000557311 TRERF1Q96PN7 1200 aa6.66□□□□□ -1.34
ATXN3-247ENST00000557311 NUCKS1Q9H1E3 243 aaKnown RBP6.66□□□□□ -1.34
ATXN3-247ENST00000557311 RUBCNLQ9H714 662 aa6.66□□□□□ -1.34
ATXN3-247ENST00000557311 HRH3Q9Y5N1 445 aa6.66□□□□□ -1.34
ATXN3-247ENST00000557311 USP42Q9H9J4 1324 aaKnown RBP6.66□□□□□ -1.34
ATXN3-247ENST00000557311 KDRP35968 1356 aa6.66□□□□□ -1.34
ATXN3-247ENST00000557311 WDR90Q96KV7 1748 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 H0YIN7 160 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 RNF225M0QZC1 329 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-247ENST00000557311 CDK2AP1O14519 115 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 PTCD1O75127 700 aaKnown RBP6.65□□□□□ -1.34
ATXN3-247ENST00000557311 MSX1P28360 303 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 MTHFSP49914 203 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 AMOTQ4VCS5 1084 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 EFHC2Q5JST6 749 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 GPAT2Q6NUI2 795 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 BICDL1Q6ZP65 573 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 TRIM22Q8IYM9 498 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 NEUROD4Q9HD90 331 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 TIMELESSQ9UNS1 1208 aa6.65□□□□□ -1.34
ATXN3-247ENST00000557311 ZBTB7BO15156 539 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-247ENST00000557311 LGR5O75473 907 aa6.64□□□□□ -1.35
ATXN3-247ENST00000557311 SERPINB2P05120 415 aa6.64□□□□□ -1.35
ATXN3-247ENST00000557311 CELA2BP08218 269 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-247ENST00000557311 SEC13P55735 322 aa6.64□□□□□ -1.35
ATXN3-247ENST00000557311 DBN1Q16643 649 aa6.64□□□□□ -1.35
ATXN3-247ENST00000557311 USPL1Q5W0Q7 1092 aa6.64□□□□□ -1.35
ATXN3-247ENST00000557311 INTS5Q6P9B9 1019 aaKnown RBP6.64□□□□□ -1.35
ATXN3-247ENST00000557311 C2CD5Q86YS7 1000 aa6.64□□□□□ -1.35
ATXN3-247ENST00000557311 SLC9A9Q8IVB4 645 aa6.64□□□□□ -1.35
ATXN3-247ENST00000557311 TSEN2Q8NCE0 465 aaKnown RBP6.64□□□□□ -1.35
ATXN3-247ENST00000557311 POLKQ9UBT6 870 aa6.64□□□□□ -1.35
ATXN3-247ENST00000557311 KDM6AO15550 1401 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-247ENST00000557311 NCAPD2Q15021 1401 aa6.64□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L15C9J2P7 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L10C9JJH3 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L13C9JLJ4 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L12C9JPN9 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L11C9JVI0 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L21D6R901 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L18D6R9N7 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L22D6RA61 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L17D6RBQ6 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L19D6RCP7 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L20D6RJB6 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 NFKBIEO00221 500 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 LBX1P52954 281 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 MARSP56192 900 aaKnown RBP6.63□□□□□ -1.35
ATXN3-247ENST00000557311 SRSF11Q05519 484 aaKnown RBP6.63□□□□□ -1.35
ATXN3-247ENST00000557311 USP17L24Q0WX57 530 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 DPYDQ12882 1025 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 EIF4A2Q14240 407 aaKnown RBP6.63□□□□□ -1.35
ATXN3-247ENST00000557311 NFIXQ14938 502 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 CRTC2Q53ET0 693 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-247ENST00000557311 ZNF837Q96EG3 531 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-247ENST00000557311 ABHD8Q96I13 439 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 SCHIP1Q9P0W5 487 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-247ENST00000557311 NARFQ9UHQ1 456 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 SERPINA10Q9UK55 444 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 TOGARAM1Q9Y4F4 1720 aa6.63□□□□□ -1.35
ATXN3-247ENST00000557311 DNMT3AQ9Y6K1 912 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-247ENST00000557311 UBR3Q6ZT12 1888 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 CNTNAP1P78357 1384 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 SERTM1A2A2V5 107 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 IQCA1LA6NCM1 817 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 TMEM88BA6NKF7 163 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 PPP1R12BO60237 982 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-247ENST00000557311 MLLT1Q03111 559 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-247ENST00000557311 ZNF530Q6P9A1 599 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-247ENST00000557311 LDHDQ86WU2 507 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 ANKMY2Q8IV38 441 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 SIX5Q8N196 739 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 FAM200AQ8TCP9 573 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 GMCL1Q96IK5 515 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 USP3Q9Y6I4 520 aa6.62□□□□□ -1.35
ATXN3-247ENST00000557311 SOS1Q07889 1333 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-247ENST00000557311 PASKQ96RG2 1323 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 C21orf2O43822 256 aa6.61□□□□□ -1.35
ATXN3-247ENST00000557311 DDNO94850 711 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-247ENST00000557311 NEFLP07196 543 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms