RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 CNTN3Q9P232 1028 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 EFR3BQ9Y2G0 817 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 KCNMB2Q9Y691 235 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 NPHP4O75161 1426 aaPredicted RBP7.95□□□□□ -1.14
FOXN3-215ENST00000557261 PTPRUQ92729 1446 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 LRRC7Q96NW7 1537 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 hCG_2014768A0A024R1R8 64 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 FAM221BA6H8Z2 402 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 TGFBR3LH3BV60 316 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 PHACTR2O75167 634 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 GADD45BO75293 160 aaPredicted RBP7.95□□□□□ -1.14
FOXN3-215ENST00000557261 NEFLP07196 543 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 XRCC5P13010 732 aaKnown RBP7.95□□□□□ -1.14
FOXN3-215ENST00000557261 HSD3B2P26439 372 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 PHKA2P46019 1235 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 GRM2Q14416 872 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 C4orf17Q53FE4 359 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 ANKS3Q6ZW76 656 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 DHX37Q8IY37 1157 aaKnown RBP7.95□□□□□ -1.14
FOXN3-215ENST00000557261 MPNDQ8N594 471 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 C1orf127Q8N9H9 656 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 SNX29Q8TEQ0 813 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 HNRNPLLQ8WVV9 542 aaKnown RBP7.95□□□□□ -1.14
FOXN3-215ENST00000557261 ITPKCQ96DU7 683 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 NLRP3Q96P20 1036 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 PRAM1Q96QH2 718 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 ZFAND3Q9H8U3 227 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 ELP3Q9H9T3 547 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 RTCBQ9Y3I0 505 aaKnown RBP7.95□□□□□ -1.14
FOXN3-215ENST00000557261 MYBBP1AQ9BQG0 1328 aaKnown RBP7.95□□□□□ -1.14
FOXN3-215ENST00000557261 ROBO2Q9HCK4 1378 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 ANKARQ7Z5J8 1434 aa7.95□□□□□ -1.14
FOXN3-215ENST00000557261 CD163L1Q9NR16 1453 aa7.94□□□□□ -1.14
FOXN3-215ENST00000557261 GIPC1O14908 333 aa7.94□□□□□ -1.14
FOXN3-215ENST00000557261 FBXO24O75426 580 aa7.94□□□□□ -1.14
FOXN3-215ENST00000557261 SSBP05455 408 aaKnown RBP eCLIP7.94□□□□□ -1.14
FOXN3-215ENST00000557261 SNRPBP14678 240 aaKnown RBP7.94□□□□□ -1.14
FOXN3-215ENST00000557261 INPP5BP32019 993 aa7.94□□□□□ -1.14
FOXN3-215ENST00000557261 MAP3K11Q16584 847 aa7.94□□□□□ -1.14
FOXN3-215ENST00000557261 TREML4Q6UXN2 200 aa7.94□□□□□ -1.14
FOXN3-215ENST00000557261 NOL8Q76FK4 1167 aaKnown RBP7.94□□□□□ -1.14
FOXN3-215ENST00000557261 ANKLE2Q86XL3 938 aa7.94□□□□□ -1.14
FOXN3-215ENST00000557261 KLF4O43474 513 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 HSPA1LP34931 641 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 IGBP1P78318 339 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 NNTQ13423 1086 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 NFE2L2Q16236 605 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
FOXN3-215ENST00000557261 XKR5Q6UX68 686 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 KIAA0825Q8IV33 1275 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 C3orf58Q8NDZ4 430 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 GLIS3Q8NEA6 775 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 RHBDD1Q8TEB9 315 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 AIDAQ96BJ3 306 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 TRIM47Q96LD4 638 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 SRPK1Q96SB4 655 aaKnown RBP7.93□□□□□ -1.14
FOXN3-215ENST00000557261 PANK3Q9H999 370 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 POGKQ9P215 609 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 TTF2Q9UNY4 1162 aaKnown RBP7.93□□□□□ -1.14
FOXN3-215ENST00000557261 WASF2Q9Y6W5 498 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 CPSF1Q10570 1443 aaKnown RBP7.93□□□□□ -1.14
FOXN3-215ENST00000557261 NCOA3Q9Y6Q9 1424 aa7.93□□□□□ -1.14
FOXN3-215ENST00000557261 CCDC85CA6NKD9 419 aa7.92□□□□□ -1.14
FOXN3-215ENST00000557261 FAM160A1Q05DH4 1040 aa7.92□□□□□ -1.14
FOXN3-215ENST00000557261 Q6ZVU0 165 aa7.92□□□□□ -1.14
FOXN3-215ENST00000557261 NLRP13Q86W25 1043 aa7.92□□□□□ -1.14
FOXN3-215ENST00000557261 SENP2Q9HC62 589 aa7.92□□□□□ -1.14
FOXN3-215ENST00000557261 IFT57Q9NWB7 429 aa7.92□□□□□ -1.14
FOXN3-215ENST00000557261 SNTG2Q9NY99 539 aa7.92□□□□□ -1.14
FOXN3-215ENST00000557261 KNSTRNQ9Y448 316 aa7.92□□□□□ -1.14
FOXN3-215ENST00000557261 PLEKHH1Q9ULM0 1364 aa7.92□□□□□ -1.14
FOXN3-215ENST00000557261 NSD3Q9BZ95 1437 aa7.92□□□□□ -1.14
FOXN3-215ENST00000557261 CENPBP07199 599 aaPredicted RBP7.91□□□□□ -1.14
FOXN3-215ENST00000557261 BMP1P13497 986 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 GBP2P32456 591 aaPredicted RBP7.91□□□□□ -1.14
FOXN3-215ENST00000557261 NFX1Q12986 1120 aaKnown RBP7.91□□□□□ -1.14
FOXN3-215ENST00000557261 FILIP1Q7Z7B0 1213 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 GALNT12Q8IXK2 581 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 ZNF296Q8WUU4 475 aaPredicted RBP7.91□□□□□ -1.14
FOXN3-215ENST00000557261 SEC16BQ96JE7 1060 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 SUV39H2Q9H5I1 410 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 FAM13BQ9NYF5 915 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 COL4A3BPQ9Y5P4 624 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 A0A1W2PP64 1363 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 DCCP43146 1447 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 EDC4Q6P2E9 1401 aaKnown RBP7.91□□□□□ -1.14
FOXN3-215ENST00000557261 ADGRL3Q9HAR2 1447 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 KIF1AQ12756 1690 aa7.91□□□□□ -1.14
FOXN3-215ENST00000557261 CGNL1Q0VF96 1302 aa7.9□□□□□ -1.14
FOXN3-215ENST00000557261 WFS1O76024 890 aa7.9□□□□□ -1.14
FOXN3-215ENST00000557261 CYP2E1P05181 493 aaPredicted RBP7.9□□□□□ -1.14
FOXN3-215ENST00000557261 RPLP1P05386 114 aaKnown RBP7.9□□□□□ -1.14
FOXN3-215ENST00000557261 FBXL19Q6PCT2 694 aa7.9□□□□□ -1.14
FOXN3-215ENST00000557261 RSRP1Q9BUV0 290 aa7.9□□□□□ -1.14
FOXN3-215ENST00000557261 KLF16Q9BXK1 252 aaPredicted RBP7.9□□□□□ -1.14
FOXN3-215ENST00000557261 GRIP2Q9C0E4 1043 aa7.9□□□□□ -1.14
FOXN3-215ENST00000557261 TERF2IPQ9NYB0 399 aa7.9□□□□□ -1.14
FOXN3-215ENST00000557261 STK26Q9P289 416 aa7.9□□□□□ -1.14
FOXN3-215ENST00000557261 TLR6Q9Y2C9 796 aa7.9□□□□□ -1.14
FOXN3-215ENST00000557261 SHPRHQ149N8 1683 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms