RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 IQSEC3Q9UPP2 1182 aaPredicted RBP8.98□□□□□ -0.97
PCNX1-213ENST00000556846 SCN9AQ15858 1988 aa8.98□□□□□ -0.97
PCNX1-213ENST00000556846 PTPN12Q05209 780 aaKnown RBP8.97□□□□□ -0.97
PCNX1-213ENST00000556846 TRMT2AQ8IZ69 625 aaKnown RBP8.97□□□□□ -0.97
PCNX1-213ENST00000556846 MTMR14Q8NCE2 650 aa8.97□□□□□ -0.97
PCNX1-213ENST00000556846 PCDHAC2Q9Y5I4 1007 aa8.97□□□□□ -0.97
PCNX1-213ENST00000556846 PPP2R3BQ9Y5P8 575 aa8.97□□□□□ -0.97
PCNX1-213ENST00000556846 FAM205AQ6ZU69 1335 aa8.97□□□□□ -0.97
PCNX1-213ENST00000556846 EYA2O00167 538 aa8.96□□□□□ -0.98
PCNX1-213ENST00000556846 SLC5A1P13866 664 aa8.96□□□□□ -0.98
PCNX1-213ENST00000556846 BCAMP50895 628 aa8.96□□□□□ -0.98
PCNX1-213ENST00000556846 TNFAIP1Q13829 316 aa8.96□□□□□ -0.98
PCNX1-213ENST00000556846 PUM3Q15397 648 aaKnown RBP8.96□□□□□ -0.98
PCNX1-213ENST00000556846 FBXO33Q7Z6M2 555 aa8.96□□□□□ -0.98
PCNX1-213ENST00000556846 TBC1D22AQ8WUA7 517 aa8.96□□□□□ -0.98
PCNX1-213ENST00000556846 MCOLN1Q9GZU1 580 aa8.96□□□□□ -0.98
PCNX1-213ENST00000556846 TDRD3Q9H7E2 651 aaKnown RBP8.96□□□□□ -0.98
PCNX1-213ENST00000556846 SERPINA10Q9UK55 444 aa8.96□□□□□ -0.98
PCNX1-213ENST00000556846 FZD1Q9UP38 647 aa8.96□□□□□ -0.98
PCNX1-213ENST00000556846 SPEF2Q9C093 1822 aa8.96□□□□□ -0.98
PCNX1-213ENST00000556846 MYH3P11055 1940 aa8.95□□□□□ -0.98
PCNX1-213ENST00000556846 TCP10L2B9ZVM9 353 aa8.95□□□□□ -0.98
PCNX1-213ENST00000556846 IPO8O15397 1037 aaKnown RBP8.95□□□□□ -0.98
PCNX1-213ENST00000556846 TBC1D8O95759 1140 aa8.95□□□□□ -0.98
PCNX1-213ENST00000556846 CRKP46108 304 aa8.95□□□□□ -0.98
PCNX1-213ENST00000556846 IREB2P48200 963 aaKnown RBP8.95□□□□□ -0.98
PCNX1-213ENST00000556846 TNNI2P48788 182 aa8.95□□□□□ -0.98
PCNX1-213ENST00000556846 SREBF2Q12772 1141 aa8.95□□□□□ -0.98
PCNX1-213ENST00000556846 RASA3Q14644 834 aa8.95□□□□□ -0.98
PCNX1-213ENST00000556846 NBPF12Q5TAG4 269 aaPredicted RBP8.95□□□□□ -0.98
PCNX1-213ENST00000556846 DZIP1LQ8IYY4 767 aaKnown RBP8.95□□□□□ -0.98
PCNX1-213ENST00000556846 LPIN2Q92539 896 aa8.95□□□□□ -0.98
PCNX1-213ENST00000556846 FRAT1Q92837 279 aaPredicted RBP8.95□□□□□ -0.98
PCNX1-213ENST00000556846 SIL1Q9H173 461 aa8.95□□□□□ -0.98
PCNX1-213ENST00000556846 CEP126Q9P2H0 1117 aa8.95□□□□□ -0.98
PCNX1-213ENST00000556846 ZNF70Q9UC06 446 aaPredicted RBP8.95□□□□□ -0.98
PCNX1-213ENST00000556846 TM4SF4P48230 202 aa8.94□□□□□ -0.98
PCNX1-213ENST00000556846 RARSP54136 660 aaKnown RBP8.94□□□□□ -0.98
PCNX1-213ENST00000556846 LDLRAD1Q5T700 205 aa8.94□□□□□ -0.98
PCNX1-213ENST00000556846 SPRYD7Q5W111 196 aa8.94□□□□□ -0.98
PCNX1-213ENST00000556846 TEKT1Q969V4 418 aa8.94□□□□□ -0.98
PCNX1-213ENST00000556846 GNL3LQ9NVN8 582 aaKnown RBP8.94□□□□□ -0.98
PCNX1-213ENST00000556846 TMOD2Q9NZR1 351 aa8.94□□□□□ -0.98
PCNX1-213ENST00000556846 LRRFIP2Q9Y608 721 aaKnown RBP8.94□□□□□ -0.98
PCNX1-213ENST00000556846 THSD7BQ9C0I4 1608 aa8.94□□□□□ -0.98
PCNX1-213ENST00000556846 CACNA1FO60840 1977 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 USP2O75604 605 aaPredicted RBP8.93□□□□□ -0.98
PCNX1-213ENST00000556846 GNAI3P08754 354 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 RFX5P48382 616 aaPredicted RBP8.93□□□□□ -0.98
PCNX1-213ENST00000556846 INHBEP58166 350 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 HDLBPQ00341 1268 aaKnown RBP8.93□□□□□ -0.98
PCNX1-213ENST00000556846 ATP2B3Q16720 1220 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 DMRTA1Q5VZB9 504 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 ANKRD13AQ8IZ07 590 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 VGLL2Q8N8G2 317 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 WDR66Q8TBY9 1149 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 ARHGAP45Q92619 1136 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 CLMNQ96JQ2 1002 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 TAOK2Q9UL54 1235 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 KIF16BQ96L93 1317 aa8.93□□□□□ -0.98
PCNX1-213ENST00000556846 PAPPA2Q9BXP8 1791 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 COL1A1P02452 1464 aaPredicted RBP8.92□□□□□ -0.98
PCNX1-213ENST00000556846 MAST3O60307 1309 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 AOX1Q06278 1338 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 MANSC4A6NHS7 340 aaPredicted RBP8.92□□□□□ -0.98
PCNX1-213ENST00000556846 UNCXA6NJT0 531 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 CIAO1O76071 339 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 ALDH1A1P00352 501 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 FGFR2P21802 821 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 IL15P40933 162 aaPredicted RBP8.92□□□□□ -0.98
PCNX1-213ENST00000556846 HNRNPUQ00839 825 aaKnown RBP eCLIP8.92□□□□□ -0.98
PCNX1-213ENST00000556846 GRIK5Q16478 980 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 MAP3K11Q16584 847 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 ATG9AQ7Z3C6 839 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 CTU1Q7Z7A3 348 aaKnown RBP8.92□□□□□ -0.98
PCNX1-213ENST00000556846 MEIS3Q99687 375 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 TMEM39BQ9GZU3 492 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 SUGT1Q9Y2Z0 365 aa8.92□□□□□ -0.98
PCNX1-213ENST00000556846 POLR2AP24928 1970 aaKnown RBP8.92□□□□□ -0.98
PCNX1-213ENST00000556846 GPR25O00155 361 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 SRGAP3O43295 1099 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 ZBTB48P10074 688 aaPredicted RBP8.91□□□□□ -0.98
PCNX1-213ENST00000556846 CACNB3P54284 484 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 DIEXFQ68CQ4 756 aaKnown RBP8.91□□□□□ -0.98
PCNX1-213ENST00000556846 INTS3Q68E01 1043 aaKnown RBP8.91□□□□□ -0.98
PCNX1-213ENST00000556846 OTUD7BQ6GQQ9 843 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 TMC2Q8TDI7 906 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 ZNF296Q8WUU4 475 aaPredicted RBP8.91□□□□□ -0.98
PCNX1-213ENST00000556846 PTCD2Q8WV60 388 aaKnown RBP8.91□□□□□ -0.98
PCNX1-213ENST00000556846 CLUAP1Q96AJ1 413 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 WNK4Q96J92 1243 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 MRIQ9BWK5 157 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 ELP3Q9H9T3 547 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 PA2G4Q9UQ80 394 aaKnown RBP8.91□□□□□ -0.98
PCNX1-213ENST00000556846 STK24Q9Y6E0 443 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 PSME4Q14997 1843 aa8.91□□□□□ -0.98
PCNX1-213ENST00000556846 FKTNO75072 461 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 BCAR3O75815 825 aa8.9□□□□□ -0.98
PCNX1-213ENST00000556846 LDHBP07195 334 aaKnown RBP8.9□□□□□ -0.98
PCNX1-213ENST00000556846 PSEN2P49810 448 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms