RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 RAD18Q9NS91 495 aa8.64□□□□□ -1.03
PCNX4-212ENST00000556360 ITGB5P18084 799 aa8.63□□□□□ -1.03
PCNX4-212ENST00000556360 ZNF765Q7L2R6 523 aa8.63□□□□□ -1.03
PCNX4-212ENST00000556360 TXNDC2Q86VQ3 553 aa8.63□□□□□ -1.03
PCNX4-212ENST00000556360 AGBL5Q8NDL9 886 aa8.63□□□□□ -1.03
PCNX4-212ENST00000556360 PAK6Q9NQU5 681 aaPredicted RBP8.63□□□□□ -1.03
PCNX4-212ENST00000556360 ZC3H7BQ9UGR2 993 aaKnown RBP8.63□□□□□ -1.03
PCNX4-212ENST00000556360 AP4E1Q9UPM8 1137 aa8.63□□□□□ -1.03
PCNX4-212ENST00000556360 GPR182O15218 404 aa8.62□□□□□ -1.03
PCNX4-212ENST00000556360 GLIS3Q8NEA6 775 aa8.62□□□□□ -1.03
PCNX4-212ENST00000556360 CCDC74AQ96AQ1 378 aa8.62□□□□□ -1.03
PCNX4-212ENST00000556360 PPP1R9AQ9ULJ8 1098 aa8.62□□□□□ -1.03
PCNX4-212ENST00000556360 EIF1AYO14602 144 aaKnown RBP8.61□□□□□ -1.03
PCNX4-212ENST00000556360 DYNC1LI2O43237 492 aaPredicted RBP8.61□□□□□ -1.03
PCNX4-212ENST00000556360 OGFOD3Q6PK18 319 aa8.61□□□□□ -1.03
PCNX4-212ENST00000556360 ALKBH8Q96BT7 664 aaKnown RBP8.61□□□□□ -1.03
PCNX4-212ENST00000556360 TRAK1Q9UPV9 953 aa8.61□□□□□ -1.03
PCNX4-212ENST00000556360 TMEM238LA0A1B0GVL6 79 aa8.6□□□□□ -1.03
PCNX4-212ENST00000556360 TMPRSS2O15393 492 aa8.6□□□□□ -1.03
PCNX4-212ENST00000556360 FAAP100Q0VG06 881 aa8.6□□□□□ -1.03
PCNX4-212ENST00000556360 WFDC3Q8IUB2 231 aa8.6□□□□□ -1.03
PCNX4-212ENST00000556360 TP53INP2Q8IXH6 220 aa8.6□□□□□ -1.03
PCNX4-212ENST00000556360 FLCNQ8NFG4 579 aa8.6□□□□□ -1.03
PCNX4-212ENST00000556360 CRIM1Q9NZV1 1036 aa8.6□□□□□ -1.03
PCNX4-212ENST00000556360 PDE3AQ14432 1141 aa8.59□□□□□ -1.03
PCNX4-212ENST00000556360 KRT82Q9NSB4 513 aa8.59□□□□□ -1.03
PCNX4-212ENST00000556360 DAGLAQ9Y4D2 1042 aa8.59□□□□□ -1.03
PCNX4-212ENST00000556360 PCDHGC5Q9Y5F6 944 aa8.59□□□□□ -1.03
PCNX4-212ENST00000556360 JUNBP17275 347 aaPredicted RBP8.58□□□□□ -1.04
PCNX4-212ENST00000556360 GRM2Q14416 872 aa8.58□□□□□ -1.04
PCNX4-212ENST00000556360 KIF4BQ2VIQ3 1234 aa8.58□□□□□ -1.04
PCNX4-212ENST00000556360 RBCK1Q9BYM8 510 aa8.58□□□□□ -1.04
PCNX4-212ENST00000556360 CCDC86Q9H6F5 360 aaKnown RBP8.58□□□□□ -1.04
PCNX4-212ENST00000556360 LRRC4CQ9HCJ2 640 aa8.58□□□□□ -1.04
PCNX4-212ENST00000556360 BCL7CQ8WUZ0 217 aaPredicted RBP8.57□□□□□ -1.04
PCNX4-212ENST00000556360 ASIC4Q96FT7 647 aa8.57□□□□□ -1.04
PCNX4-212ENST00000556360 DMRTB1Q96MA1 342 aa8.57□□□□□ -1.04
PCNX4-212ENST00000556360 NIF3L1Q9GZT8 377 aa8.57□□□□□ -1.04
PCNX4-212ENST00000556360 ZNF862O60290 1169 aa8.56□□□□□ -1.04
PCNX4-212ENST00000556360 STK11IPQ8N1F8 1099 aa8.56□□□□□ -1.04
PCNX4-212ENST00000556360 WDR89Q96FK6 387 aaPredicted RBP8.56□□□□□ -1.04
PCNX4-212ENST00000556360 FANCD2OSQ96PS1 177 aa8.56□□□□□ -1.04
PCNX4-212ENST00000556360 CSRNP1Q96S65 589 aa8.56□□□□□ -1.04
PCNX4-212ENST00000556360 ATXN3LQ9H3M9 355 aa8.56□□□□□ -1.04
PCNX4-212ENST00000556360 LIG1P18858 919 aa8.55□□□□□ -1.04
PCNX4-212ENST00000556360 ID3Q02535 119 aa8.55□□□□□ -1.04
PCNX4-212ENST00000556360 CYP27C1Q4G0S4 372 aa8.55□□□□□ -1.04
PCNX4-212ENST00000556360 OGFOD2Q6N063 350 aa8.55□□□□□ -1.04
PCNX4-212ENST00000556360 PDZD3Q86UT5 571 aa8.55□□□□□ -1.04
PCNX4-212ENST00000556360 MISP3Q96FF7 219 aa8.55□□□□□ -1.04
PCNX4-212ENST00000556360 SLC5A6Q9Y289 635 aa8.55□□□□□ -1.04
PCNX4-212ENST00000556360 GADD45BO75293 160 aaPredicted RBP8.54□□□□□ -1.04
PCNX4-212ENST00000556360 GSTP1P09211 210 aaKnown RBP8.54□□□□□ -1.04
PCNX4-212ENST00000556360 SLFN14P0C7P3 912 aa8.54□□□□□ -1.04
PCNX4-212ENST00000556360 POU5F2Q8N7G0 328 aa8.54□□□□□ -1.04
PCNX4-212ENST00000556360 DISC1Q9NRI5 854 aa8.54□□□□□ -1.04
PCNX4-212ENST00000556360 HNRNPUQ00839 825 aaKnown RBP eCLIP8.53□□□□□ -1.04
PCNX4-212ENST00000556360 ERICH6Q7L0X2 663 aa8.53□□□□□ -1.04
PCNX4-212ENST00000556360 EPS8L3Q8TE67 593 aaKnown RBP8.53□□□□□ -1.04
PCNX4-212ENST00000556360 XRCC5P13010 732 aaKnown RBP8.52□□□□□ -1.05
PCNX4-212ENST00000556360 SPRED2Q7Z698 418 aa8.52□□□□□ -1.05
PCNX4-212ENST00000556360 PIDD1Q9HB75 910 aa8.52□□□□□ -1.05
PCNX4-212ENST00000556360 PAPLNO95428 1278 aa8.51□□□□□ -1.05
PCNX4-212ENST00000556360 FAM87AP0C7U9 286 aa8.51□□□□□ -1.05
PCNX4-212ENST00000556360 ZNF157P51786 506 aaPredicted RBP8.51□□□□□ -1.05
PCNX4-212ENST00000556360 CDK5R2Q13319 367 aa8.51□□□□□ -1.05
PCNX4-212ENST00000556360 ZNF574Q6ZN55 896 aaPredicted RBP8.51□□□□□ -1.05
PCNX4-212ENST00000556360 SMYD4Q8IYR2 804 aaPredicted RBP8.51□□□□□ -1.05
PCNX4-212ENST00000556360 NETO1Q8TDF5 533 aa8.51□□□□□ -1.05
PCNX4-212ENST00000556360 TMC1Q8TDI8 760 aa8.51□□□□□ -1.05
PCNX4-212ENST00000556360 MKNK2Q9HBH9 465 aa8.51□□□□□ -1.05
PCNX4-212ENST00000556360 LGR6Q9HBX8 967 aa8.51□□□□□ -1.05
PCNX4-212ENST00000556360 TMEM39AQ9NV64 488 aa8.51□□□□□ -1.05
PCNX4-212ENST00000556360 PPP2R3AQ06190 1150 aa8.5□□□□□ -1.05
PCNX4-212ENST00000556360 FZD5Q13467 585 aa8.5□□□□□ -1.05
PCNX4-212ENST00000556360 DTHD1Q6ZMT9 781 aa8.5□□□□□ -1.05
PCNX4-212ENST00000556360 C14orf37Q86TY3 774 aa8.5□□□□□ -1.05
PCNX4-212ENST00000556360 CCER1Q8TC90 406 aaPredicted RBP8.5□□□□□ -1.05
PCNX4-212ENST00000556360 ZC3H12CQ9C0D7 883 aaKnown RBP8.5□□□□□ -1.05
PCNX4-212ENST00000556360 TTLL4Q14679 1199 aa8.49□□□□□ -1.05
PCNX4-212ENST00000556360 ZNF792Q3KQV3 632 aa8.49□□□□□ -1.05
PCNX4-212ENST00000556360 CACNA2D2Q9NY47 1150 aa8.49□□□□□ -1.05
PCNX4-212ENST00000556360 SOWAHDA6NJG2 315 aa8.48□□□□□ -1.05
PCNX4-212ENST00000556360 NEFMP07197 916 aa8.48□□□□□ -1.05
PCNX4-212ENST00000556360 FCGRTP55899 365 aa8.48□□□□□ -1.05
PCNX4-212ENST00000556360 PDE4CQ08493 712 aa8.48□□□□□ -1.05
PCNX4-212ENST00000556360 PLCL1Q15111 1095 aa8.48□□□□□ -1.05
PCNX4-212ENST00000556360 ZC3H12AQ5D1E8 599 aaKnown RBP8.48□□□□□ -1.05
PCNX4-212ENST00000556360 TMC7Q7Z402 723 aa8.48□□□□□ -1.05
PCNX4-212ENST00000556360 SULF2Q8IWU5 870 aa8.48□□□□□ -1.05
PCNX4-212ENST00000556360 PLD6Q8N2A8 252 aaKnown RBP8.48□□□□□ -1.05
PCNX4-212ENST00000556360 RETREG2Q8NC44 543 aa8.48□□□□□ -1.05
PCNX4-212ENST00000556360 VAV3Q9UKW4 847 aa8.48□□□□□ -1.05
PCNX4-212ENST00000556360 U3KQE9 123 aa8.48□□□□□ -1.05
PCNX4-212ENST00000556360 FUT4P22083 530 aa8.47□□□□□ -1.05
PCNX4-212ENST00000556360 ERVK-24P63145 666 aa8.47□□□□□ -1.05
PCNX4-212ENST00000556360 JAG1P78504 1218 aa8.47□□□□□ -1.05
PCNX4-212ENST00000556360 DSC3Q14574 896 aa8.47□□□□□ -1.05
PCNX4-212ENST00000556360 PI16Q6UXB8 463 aa8.47□□□□□ -1.05
PCNX4-212ENST00000556360 FAM181AQ8N9Y4 354 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms