RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 ROCK2O75116 1388 aaKnown RBP6.79□□□□□ -1.32
ATXN3-239ENST00000556315 COL24A1Q17RW2 1714 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 KIAA1210Q9ULL0 1709 aa6.79□□□□□ -1.32
ATXN3-239ENST00000556315 BTAF1O14981 1849 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 EDC4Q6P2E9 1401 aaKnown RBP6.78□□□□□ -1.32
ATXN3-239ENST00000556315 NSD3Q9BZ95 1437 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 LOC102724428A0A0B4J2F2 783 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 C1QTNF9BB2RNN3 333 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 MMP10P09238 476 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 FBLN1P23142 703 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 EPHA4P54764 986 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 SIK1P57059 783 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 LAMC2Q13753 1193 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 SMIM5Q71RC9 77 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 ZDHHC1Q8WTX9 485 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 PIGBQ92521 554 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 NOP53Q9NZM5 478 aaKnown RBP6.78□□□□□ -1.32
ATXN3-239ENST00000556315 NOD1Q9Y239 953 aa6.78□□□□□ -1.32
ATXN3-239ENST00000556315 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
ATXN3-239ENST00000556315 PCDH11XQ9BZA7 1347 aa6.77□□□□□ -1.32
ATXN3-239ENST00000556315 PCDH11YQ9BZA8 1340 aa6.77□□□□□ -1.32
ATXN3-239ENST00000556315 USP17L3A6NCW0 530 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 USP17L4A6NCW7 530 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 CYP27B1O15528 508 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 DPEP1P16444 411 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 RFX1P22670 979 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 TXLNAP40222 546 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 GTF2IP78347 998 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 TMF1P82094 1093 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 TEAD4Q15561 434 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 XP32Q5T750 250 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 USP17L2Q6R6M4 530 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 USP17L1Q7RTZ2 530 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 CD163Q86VB7 1156 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 USHBP1Q8N6Y0 703 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 SMC1BQ8NDV3 1235 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 C7orf43Q8WVR3 580 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 PBXIP1Q96AQ6 731 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 MDFIQ99750 246 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 CCDC87Q9NVE4 849 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 ZNF358Q9NW07 568 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 PARP3Q9Y6F1 533 aa6.77□□□□□ -1.33
ATXN3-239ENST00000556315 QSER1Q2KHR3 1735 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 WNK3Q9BYP7 1800 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 EML1O00423 815 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 FURINP09958 794 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 NCOA4Q13772 614 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
ATXN3-239ENST00000556315 CARD11Q9BXL7 1154 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 MARK1Q9P0L2 795 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 GJA3Q9Y6H8 435 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 CD163L1Q9NR16 1453 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 QRICH2Q9H0J4 1663 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 MEGF6O75095 1541 aa6.76□□□□□ -1.33
ATXN3-239ENST00000556315 A0A1W2PP64 1363 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 KCNA3P22001 575 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 NOS2P35228 1153 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 CHRNA4P43681 627 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 PCBP4P57723 403 aaKnown RBP6.75□□□□□ -1.33
ATXN3-239ENST00000556315 ITPK1Q13572 414 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 RRS1Q15050 365 aaKnown RBP6.75□□□□□ -1.33
ATXN3-239ENST00000556315 HSP90AB2PQ58FF8 381 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
ATXN3-239ENST00000556315 TRIM11Q96F44 468 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 SIN3AQ96ST3 1273 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 VRTNQ9H8Y1 702 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 TMOD3Q9NYL9 352 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 PRR12Q9ULL5 1215 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 SPG7Q9UQ90 795 aa6.75□□□□□ -1.33
ATXN3-239ENST00000556315 RTCBQ9Y3I0 505 aaKnown RBP6.75□□□□□ -1.33
ATXN3-239ENST00000556315 GPC6Q9Y625 555 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-239ENST00000556315 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
ATXN3-239ENST00000556315 PLEKHG2Q9H7P9 1386 aa6.74□□□□□ -1.33
ATXN3-239ENST00000556315 FYB1O15117 783 aa6.74□□□□□ -1.33
ATXN3-239ENST00000556315 HSPA1AP0DMV8 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-239ENST00000556315 HSPA1BP0DMV9 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-239ENST00000556315 RFC4P35249 363 aa6.74□□□□□ -1.33
ATXN3-239ENST00000556315 NEUROD1Q13562 356 aa6.74□□□□□ -1.33
ATXN3-239ENST00000556315 BICDL1Q6ZP65 573 aa6.74□□□□□ -1.33
ATXN3-239ENST00000556315 TRIM50Q86XT4 487 aa6.74□□□□□ -1.33
ATXN3-239ENST00000556315 DEPDC4Q8N2C3 294 aa6.74□□□□□ -1.33
ATXN3-239ENST00000556315 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
ATXN3-239ENST00000556315 ASAP1Q9ULH1 1129 aa6.74□□□□□ -1.33
ATXN3-239ENST00000556315 SMG6Q86US8 1419 aaKnown RBP6.74□□□□□ -1.33
ATXN3-239ENST00000556315 KAT6BQ8WYB5 2073 aa6.73□□□□□ -1.33
ATXN3-239ENST00000556315 PXDNLA1KZ92 1463 aa6.73□□□□□ -1.33
ATXN3-239ENST00000556315 RTL1A6NKG5 1358 aa6.73□□□□□ -1.33
ATXN3-239ENST00000556315 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-239ENST00000556315 ELOA3CA0A087WX78 387 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-239ENST00000556315 ELOA3DA6NLF2 546 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-239ENST00000556315 GYS1P13807 737 aa6.73□□□□□ -1.33
ATXN3-239ENST00000556315 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-239ENST00000556315 ATP1A2P50993 1020 aa6.73□□□□□ -1.33
ATXN3-239ENST00000556315 ELOA3BQ3SY89 546 aa6.73□□□□□ -1.33
ATXN3-239ENST00000556315 SLC9A9Q8IVB4 645 aa6.73□□□□□ -1.33
ATXN3-239ENST00000556315 ELOA3Q8NG57 546 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms