RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 FAM160A1Q05DH4 1040 aa6.64□□□□□ -1.35
CDKN3-210ENST00000556305 APOBRQ0VD83 1088 aa6.64□□□□□ -1.35
CDKN3-210ENST00000556305 POU4F3Q15319 338 aa6.64□□□□□ -1.35
CDKN3-210ENST00000556305 TXNDC11Q6PKC3 985 aa6.64□□□□□ -1.35
CDKN3-210ENST00000556305 BEND7Q8N7W2 519 aaPredicted RBP6.64□□□□□ -1.35
CDKN3-210ENST00000556305 RASGRP4Q8TDF6 673 aa6.64□□□□□ -1.35
CDKN3-210ENST00000556305 ACSBG1Q96GR2 724 aa6.64□□□□□ -1.35
CDKN3-210ENST00000556305 SEC16BQ96JE7 1060 aa6.64□□□□□ -1.35
CDKN3-210ENST00000556305 KCNQ5Q9NR82 932 aa6.64□□□□□ -1.35
CDKN3-210ENST00000556305 PRKAG2Q9UGJ0 569 aa6.64□□□□□ -1.35
CDKN3-210ENST00000556305 ADAMTS1Q9UHI8 967 aa6.64□□□□□ -1.35
CDKN3-210ENST00000556305 TRIM37O94972 964 aa6.63□□□□□ -1.35
CDKN3-210ENST00000556305 TRAPPC3LQ5T215 181 aa6.63□□□□□ -1.35
CDKN3-210ENST00000556305 ADAMTSL4Q6UY14 1074 aa6.63□□□□□ -1.35
CDKN3-210ENST00000556305 DMRTC2Q8IXT2 367 aaPredicted RBP6.63□□□□□ -1.35
CDKN3-210ENST00000556305 KCNB2Q92953 911 aa6.63□□□□□ -1.35
CDKN3-210ENST00000556305 ARMC5Q96C12 935 aa6.63□□□□□ -1.35
CDKN3-210ENST00000556305 GMLQ99445 158 aa6.63□□□□□ -1.35
CDKN3-210ENST00000556305 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDKN3-210ENST00000556305 KRT82Q9NSB4 513 aa6.63□□□□□ -1.35
CDKN3-210ENST00000556305 STRIP2Q9ULQ0 834 aa6.63□□□□□ -1.35
CDKN3-210ENST00000556305 NID1P14543 1247 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 BMP6P22004 513 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 DGKGP49619 791 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 MPP2Q14168 576 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 PDE3AQ14432 1141 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 CWF19L2Q2TBE0 894 aaKnown RBP6.62□□□□□ -1.35
CDKN3-210ENST00000556305 MAP1SQ66K74 1059 aaPredicted RBP6.62□□□□□ -1.35
CDKN3-210ENST00000556305 FBXL19Q6PCT2 694 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 FAM196AQ6ZSG2 479 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 C8orf86Q6ZUL3 223 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 PODNQ7Z5L7 613 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 GATAD2BQ8WXI9 593 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 NKD1Q969G9 470 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 USP26Q9BXU7 913 aa6.62□□□□□ -1.35
CDKN3-210ENST00000556305 SSBP05455 408 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDKN3-210ENST00000556305 ATF4P18848 351 aaPredicted RBP6.61□□□□□ -1.35
CDKN3-210ENST00000556305 CD68P34810 354 aaPredicted RBP6.61□□□□□ -1.35
CDKN3-210ENST00000556305 JARID2Q92833 1246 aaPredicted RBP6.61□□□□□ -1.35
CDKN3-210ENST00000556305 CARD10Q9BWT7 1032 aa6.61□□□□□ -1.35
CDKN3-210ENST00000556305 LRRC3Q9BY71 257 aa6.61□□□□□ -1.35
CDKN3-210ENST00000556305 NOP53Q9NZM5 478 aaKnown RBP6.61□□□□□ -1.35
CDKN3-210ENST00000556305 MKL2Q9ULH7 1088 aa6.61□□□□□ -1.35
CDKN3-210ENST00000556305 GNB5O14775 395 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 GREM1O60565 184 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 IGSF3O75054 1194 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 STK10O94804 968 aaKnown RBP6.6□□□□□ -1.35
CDKN3-210ENST00000556305 MAOBP27338 520 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 ZNF252P-AS1Q0IIN9 211 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 SEPT6Q14141 434 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 SETDB1Q15047 1291 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 PRRT3Q5FWE3 981 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 SOGA3Q5TF21 947 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 CPLX3Q8WVH0 158 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 KLHDC7BQ96G42 594 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 EAF1Q96JC9 268 aaPredicted RBP6.6□□□□□ -1.35
CDKN3-210ENST00000556305 HIRIP3Q9BW71 556 aaPredicted RBP6.6□□□□□ -1.35
CDKN3-210ENST00000556305 EFR3BQ9Y2G0 817 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 PCDHB5Q9Y5E4 795 aa6.6□□□□□ -1.35
CDKN3-210ENST00000556305 GARTP22102 1010 aa6.59□□□□□ -1.35
CDKN3-210ENST00000556305 GTF2F1P35269 517 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDKN3-210ENST00000556305 ZNF165P49910 485 aa6.59□□□□□ -1.35
CDKN3-210ENST00000556305 NLRP12P59046 1061 aa6.59□□□□□ -1.35
CDKN3-210ENST00000556305 RPL6Q02878 288 aaKnown RBP6.59□□□□□ -1.35
CDKN3-210ENST00000556305 TRIM28Q13263 835 aaKnown RBP6.59□□□□□ -1.35
CDKN3-210ENST00000556305 PDZD3Q86UT5 571 aa6.59□□□□□ -1.35
CDKN3-210ENST00000556305 UBP1Q9NZI7 540 aa6.59□□□□□ -1.35
CDKN3-210ENST00000556305 KRBA1A5PL33 1030 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 CILPO75339 1184 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 F13A1P00488 732 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 SLFN14P0C7P3 912 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 IMPDH2P12268 514 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 MCM4P33991 863 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 MLECQ14165 292 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 SEZ6Q53EL9 994 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 BNC2Q6ZN30 1099 aaPredicted RBP6.58□□□□□ -1.36
CDKN3-210ENST00000556305 HDXQ7Z353 690 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 FBXO11Q86XK2 927 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 SLITRK4Q8IW52 837 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 GRIN3AQ8TCU5 1115 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 STK35Q8TDR2 534 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 GAL3ST3Q96A11 431 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 ELMO3Q96BJ8 720 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 ZC3H12CQ9C0D7 883 aaKnown RBP6.58□□□□□ -1.36
CDKN3-210ENST00000556305 RAD18Q9NS91 495 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 PCDHA4Q9UN74 947 aa6.58□□□□□ -1.36
CDKN3-210ENST00000556305 TLR3O15455 904 aaKnown RBP6.57□□□□□ -1.36
CDKN3-210ENST00000556305 FGRP09769 529 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 FURINP09958 794 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 SOX9P48436 509 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 NASPP49321 788 aaPredicted RBP6.57□□□□□ -1.36
CDKN3-210ENST00000556305 DUOXA2Q1HG44 320 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 RASIP1Q5U651 963 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 HGSNATQ68CP4 663 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 FMR1NBQ8N0W7 255 aaPredicted RBP6.57□□□□□ -1.36
CDKN3-210ENST00000556305 GPBAR1Q8TDU6 330 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 FERD3LQ96RJ6 166 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 CRBNQ96SW2 442 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 KRTAP9-9Q9BYP9 154 aa6.57□□□□□ -1.36
CDKN3-210ENST00000556305 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms