RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 SCN11AQ9UI33 1791 aa7.98□□□□□ -1.13
HIF1A-208ENST00000556237 MYL6BP14649 208 aa7.98□□□□□ -1.13
HIF1A-208ENST00000556237 SNRPNP63162 240 aaKnown RBP7.98□□□□□ -1.13
HIF1A-208ENST00000556237 AIMP1Q12904 312 aaKnown RBP7.98□□□□□ -1.13
HIF1A-208ENST00000556237 INTS3Q68E01 1043 aaKnown RBP7.98□□□□□ -1.13
HIF1A-208ENST00000556237 CCDC85AQ96PX6 553 aaPredicted RBP7.98□□□□□ -1.13
HIF1A-208ENST00000556237 RAB6BQ9NRW1 208 aa7.98□□□□□ -1.13
HIF1A-208ENST00000556237 MKL2Q9ULH7 1088 aa7.98□□□□□ -1.13
HIF1A-208ENST00000556237 LRRC37A3O60309 1634 aa7.98□□□□□ -1.13
HIF1A-208ENST00000556237 ABCC4O15439 1325 aa7.98□□□□□ -1.13
HIF1A-208ENST00000556237 NWD2Q9ULI1 1742 aa7.98□□□□□ -1.13
HIF1A-208ENST00000556237 GNRH1P01148 92 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 IGHDP01880 384 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 THBS1P07996 1170 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 SOX11P35716 441 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 CCT4P50991 539 aaKnown RBP7.97□□□□□ -1.13
HIF1A-208ENST00000556237 SEMA3FQ13275 785 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 PROSER3Q2NL68 480 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 ALYREFQ86V81 257 aaKnown RBP7.97□□□□□ -1.13
HIF1A-208ENST00000556237 CNKSR1Q969H4 720 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 ESYT1Q9BSJ8 1104 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 TEX13AQ9BXU3 409 aaPredicted RBP7.97□□□□□ -1.13
HIF1A-208ENST00000556237 RWDD1Q9H446 243 aaPredicted RBP7.97□□□□□ -1.13
HIF1A-208ENST00000556237 GPAMQ9HCL2 828 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 ZBTB40Q9NUA8 1239 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 ADAMTS7Q9UKP4 1686 aa7.97□□□□□ -1.13
HIF1A-208ENST00000556237 KAT6BQ8WYB5 2073 aa7.96□□□□□ -1.13
HIF1A-208ENST00000556237 NRAPQ86VF7 1730 aa7.96□□□□□ -1.14
HIF1A-208ENST00000556237 A0A1B0GTH6 734 aa7.96□□□□□ -1.14
HIF1A-208ENST00000556237 PI4KAP2A4QPH2 592 aa7.96□□□□□ -1.14
HIF1A-208ENST00000556237 SHISA8B8ZZ34 492 aa7.96□□□□□ -1.14
HIF1A-208ENST00000556237 K7ELQ4 463 aaPredicted RBP7.96□□□□□ -1.14
HIF1A-208ENST00000556237 PIK3CDO00329 1044 aa7.96□□□□□ -1.14
HIF1A-208ENST00000556237 DDX58O95786 925 aaKnown RBP7.96□□□□□ -1.14
HIF1A-208ENST00000556237 A1BGP04217 495 aa7.96□□□□□ -1.14
HIF1A-208ENST00000556237 PIP4K2AP48426 406 aaPredicted RBP7.96□□□□□ -1.14
HIF1A-208ENST00000556237 KSR2Q6VAB6 950 aa7.96□□□□□ -1.14
HIF1A-208ENST00000556237 CENPQQ7L2Z9 268 aaPredicted RBP7.96□□□□□ -1.14
HIF1A-208ENST00000556237 COPS6Q7L5N1 327 aa7.96□□□□□ -1.14
HIF1A-208ENST00000556237 PI4KAP1Q8N8J0 262 aa7.96□□□□□ -1.14
HIF1A-208ENST00000556237 KLRG1Q96E93 195 aa7.96□□□□□ -1.14
HIF1A-208ENST00000556237 GDF2Q9UK05 429 aaPredicted RBP7.96□□□□□ -1.14
HIF1A-208ENST00000556237 TNS2Q63HR2 1409 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 MRC1P22897 1456 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 KDM3BQ7LBC6 1761 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 VIRMAQ69YN4 1812 aaKnown RBP7.95□□□□□ -1.14
HIF1A-208ENST00000556237 KCNQ2O43526 872 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 STARD3NLO95772 234 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 IL2RAP01589 272 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 CENPCQ03188 943 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 LBRQ14739 615 aaKnown RBP7.95□□□□□ -1.14
HIF1A-208ENST00000556237 DNAJC10Q8IXB1 793 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 FBXO41Q8TF61 875 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 XAGE3Q8WTP9 111 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 DNAAF4Q8WXU2 420 aa7.95□□□□□ -1.14
HIF1A-208ENST00000556237 ZSCAN10Q96SZ4 725 aaPredicted RBP7.95□□□□□ -1.14
HIF1A-208ENST00000556237 SIPA1L3O60292 1781 aaPredicted RBP7.94□□□□□ -1.14
HIF1A-208ENST00000556237 KRBA1A5PL33 1030 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 GTF2E1P29083 439 aaPredicted RBP7.94□□□□□ -1.14
HIF1A-208ENST00000556237 PHKA2P46019 1235 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 FAM182BQ5T319 152 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 ZNF772Q68DY9 489 aaPredicted RBP7.94□□□□□ -1.14
HIF1A-208ENST00000556237 GOLGA6L1Q8N7Z2 621 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 SMARCC1Q92922 1105 aaPredicted RBP7.94□□□□□ -1.14
HIF1A-208ENST00000556237 GLMNQ92990 594 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 UCN2Q96RP3 112 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 SRCIN1Q9C0H9 1055 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 C1orf115Q9H7X2 142 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 RRAGCQ9HB90 399 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 MAP3K2Q9Y2U5 619 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 BCL9O00512 1426 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 ATRNO75882 1429 aa7.94□□□□□ -1.14
HIF1A-208ENST00000556237 SHANK3Q9BYB0 1731 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 MYCP01106 439 aaPredicted RBP7.93□□□□□ -1.14
HIF1A-208ENST00000556237 GNAI3P08754 354 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 BAG6P46379 1132 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 GNASQ5JWF2 1037 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 BEND3Q5T5X7 828 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 C1orf229Q6ZS94 237 aaPredicted RBP7.93□□□□□ -1.14
HIF1A-208ENST00000556237 PGBD3Q8N328 593 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 EDARADDQ8WWZ3 215 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 SLC4A9Q96Q91 983 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 ARXQ96QS3 562 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 MEIS3Q99687 375 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 KDM2BQ8NHM5 1336 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 RGS12O14924 1447 aa7.93□□□□□ -1.14
HIF1A-208ENST00000556237 ALDH1L1O75891 902 aa7.92□□□□□ -1.14
HIF1A-208ENST00000556237 GNAI2P04899 355 aa7.92□□□□□ -1.14
HIF1A-208ENST00000556237 CYP19A1P11511 503 aaPredicted RBP7.92□□□□□ -1.14
HIF1A-208ENST00000556237 RBM6P78332 1123 aaKnown RBP7.92□□□□□ -1.14
HIF1A-208ENST00000556237 NEXNQ0ZGT2 675 aa7.92□□□□□ -1.14
HIF1A-208ENST00000556237 HDAC1Q13547 482 aaPredicted RBP7.92□□□□□ -1.14
HIF1A-208ENST00000556237 UBAP2LQ14157 1087 aaKnown RBP7.92□□□□□ -1.14
HIF1A-208ENST00000556237 SLFNL1Q499Z3 407 aa7.92□□□□□ -1.14
HIF1A-208ENST00000556237 TMEM214Q6NUQ4 689 aaKnown RBP7.92□□□□□ -1.14
HIF1A-208ENST00000556237 LRP10Q7Z4F1 713 aa7.92□□□□□ -1.14
HIF1A-208ENST00000556237 RNF135Q8IUD6 432 aa7.92□□□□□ -1.14
HIF1A-208ENST00000556237 RPAP2Q8IXW5 612 aaPredicted RBP7.92□□□□□ -1.14
HIF1A-208ENST00000556237 METTL22Q9BUU2 404 aaPredicted RBP7.92□□□□□ -1.14
HIF1A-208ENST00000556237 USP44Q9H0E7 712 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms