RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 CLRN2A0PK11 232 aa13.85□□□□□ -0.19
GABRB3-210ENST00000556166 M0R2C6 588 aa13.85□□□□□ -0.19
GABRB3-210ENST00000556166 KIF3CO14782 793 aa13.85□□□□□ -0.19
GABRB3-210ENST00000556166 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-210ENST00000556166 CHMLP26374 656 aa13.85□□□□□ -0.19
GABRB3-210ENST00000556166 CACNB3P54284 484 aa13.85□□□□□ -0.19
GABRB3-210ENST00000556166 ZSCAN25Q6NSZ9 544 aa13.85□□□□□ -0.19
GABRB3-210ENST00000556166 SLF2Q8IX21 1173 aa13.85□□□□□ -0.19
GABRB3-210ENST00000556166 SH3RF3Q8TEJ3 882 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-210ENST00000556166 GPBP1L1Q9HC44 474 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-210ENST00000556166 USP40Q9NVE5 1235 aa13.85□□□□□ -0.19
GABRB3-210ENST00000556166 AATFQ9NY61 560 aaKnown RBP eCLIP13.85□□□□□ -0.19
GABRB3-210ENST00000556166 ZNF70Q9UC06 446 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-210ENST00000556166 PGAP2Q9UHJ9 254 aa13.85□□□□□ -0.19
GABRB3-210ENST00000556166 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
GABRB3-210ENST00000556166 NMIQ13287 307 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-210ENST00000556166 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
GABRB3-210ENST00000556166 EAPPQ56P03 285 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-210ENST00000556166 TMED8Q6PL24 325 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-210ENST00000556166 TICAM2Q86XR7 235 aa13.84□□□□□ -0.19
GABRB3-210ENST00000556166 APPBP2Q92624 585 aa13.84□□□□□ -0.19
GABRB3-210ENST00000556166 IL25Q9H293 177 aa13.84□□□□□ -0.19
GABRB3-210ENST00000556166 ADAMTSL1Q8N6G6 1762 aa13.84□□□□□ -0.19
GABRB3-210ENST00000556166 MAGEB6P1A0A0J9YX57 407 aa13.83□□□□□ -0.19
GABRB3-210ENST00000556166 WDHD1O75717 1129 aaPredicted RBP13.83□□□□□ -0.19
GABRB3-210ENST00000556166 NFIAQ12857 509 aa13.83□□□□□ -0.19
GABRB3-210ENST00000556166 DLK2Q6UY11 383 aa13.83□□□□□ -0.19
GABRB3-210ENST00000556166 CCDC129Q6ZRS4 1044 aa13.83□□□□□ -0.19
GABRB3-210ENST00000556166 PNMA8AQ86V59 439 aaPredicted RBP13.83□□□□□ -0.19
GABRB3-210ENST00000556166 LCORLQ8N3X6 602 aa13.83□□□□□ -0.19
GABRB3-210ENST00000556166 STRBPQ96SI9 672 aaKnown RBP13.83□□□□□ -0.19
GABRB3-210ENST00000556166 ARMT1Q9H993 441 aa13.83□□□□□ -0.19
GABRB3-210ENST00000556166 DOCK2Q92608 1830 aa13.83□□□□□ -0.2
GABRB3-210ENST00000556166 PRKAB2O43741 272 aa13.83□□□□□ -0.2
GABRB3-210ENST00000556166 MBD4O95243 580 aa13.83□□□□□ -0.2
GABRB3-210ENST00000556166 ANGEL2Q5VTE6 544 aaKnown RBP13.83□□□□□ -0.2
GABRB3-210ENST00000556166 ZFPM1Q8IX07 1006 aa13.83□□□□□ -0.2
GABRB3-210ENST00000556166 DDX4Q9NQI0 724 aaKnown RBP13.83□□□□□ -0.2
GABRB3-210ENST00000556166 FAM198AQ9UFP1 575 aa13.83□□□□□ -0.2
GABRB3-210ENST00000556166 RFX7Q2KHR2 1363 aa13.82□□□□□ -0.2
GABRB3-210ENST00000556166 BAG3O95817 575 aa13.82□□□□□ -0.2
GABRB3-210ENST00000556166 LRRFIP1Q32MZ4 808 aaKnown RBP13.82□□□□□ -0.2
GABRB3-210ENST00000556166 CWC27Q6UX04 472 aaKnown RBP13.82□□□□□ -0.2
GABRB3-210ENST00000556166 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
GABRB3-210ENST00000556166 HELLSQ9NRZ9 838 aa13.82□□□□□ -0.2
GABRB3-210ENST00000556166 GGA3Q9NZ52 723 aa13.82□□□□□ -0.2
GABRB3-210ENST00000556166 SCN4AP35499 1836 aa13.81□□□□□ -0.2
GABRB3-210ENST00000556166 TCP10L2B9ZVM9 353 aa13.81□□□□□ -0.2
GABRB3-210ENST00000556166 FOXP2O15409 715 aa13.81□□□□□ -0.2
GABRB3-210ENST00000556166 MCMDC2Q4G0Z9 681 aa13.81□□□□□ -0.2
GABRB3-210ENST00000556166 MAP1SQ66K74 1059 aaPredicted RBP13.81□□□□□ -0.2
GABRB3-210ENST00000556166 ZNF589Q86UQ0 364 aaPredicted RBP13.81□□□□□ -0.2
GABRB3-210ENST00000556166 DIAPH3Q9NSV4 1193 aa13.81□□□□□ -0.2
GABRB3-210ENST00000556166 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
GABRB3-210ENST00000556166 CNTNAP1P78357 1384 aa13.8□□□□□ -0.2
GABRB3-210ENST00000556166 GPAA1O43292 621 aa13.8□□□□□ -0.2
GABRB3-210ENST00000556166 LDHDQ86WU2 507 aa13.8□□□□□ -0.2
GABRB3-210ENST00000556166 TEX11Q8IYF3 940 aa13.8□□□□□ -0.2
GABRB3-210ENST00000556166 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
GABRB3-210ENST00000556166 IDI2Q9BXS1 227 aa13.8□□□□□ -0.2
GABRB3-210ENST00000556166 VEZTQ9HBM0 779 aa13.8□□□□□ -0.2
GABRB3-210ENST00000556166 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
GABRB3-210ENST00000556166 MYH2Q9UKX2 1941 aa13.8□□□□□ -0.2
GABRB3-210ENST00000556166 HIP1O00291 1037 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 MYO1BO43795 1136 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 PLCG2P16885 1265 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 USP48Q86UV5 1035 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 CDAN1Q8IWY9 1227 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 AIDAQ96BJ3 306 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 NOL10Q9BSC4 688 aaKnown RBP13.79□□□□□ -0.2
GABRB3-210ENST00000556166 GSG1L2A8MUP6 293 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 ADM5C9JUS6 153 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 FMR1Q06787 632 aaKnown RBP eCLIP13.79□□□□□ -0.2
GABRB3-210ENST00000556166 TCP10Q12799 353 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 RASA3Q14644 834 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 FKBP1CQ5VVH2 108 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 SH3BP5LQ7L8J4 393 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 MAPKAPK5Q8IW41 473 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 SDR42E1Q8WUS8 393 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 GLIS2Q9BZE0 524 aaPredicted RBP13.79□□□□□ -0.2
GABRB3-210ENST00000556166 DEFB129Q9H1M3 183 aa13.79□□□□□ -0.2
GABRB3-210ENST00000556166 PITPNM2Q9BZ72 1349 aa13.78□□□□□ -0.2
GABRB3-210ENST00000556166 SGSM2O43147 1006 aa13.78□□□□□ -0.2
GABRB3-210ENST00000556166 CDC45O75419 566 aa13.78□□□□□ -0.2
GABRB3-210ENST00000556166 PICALMQ13492 652 aa13.78□□□□□ -0.2
GABRB3-210ENST00000556166 KRT26Q7Z3Y9 468 aa13.78□□□□□ -0.2
GABRB3-210ENST00000556166 DCPSQ96C86 337 aaKnown RBP13.78□□□□□ -0.2
GABRB3-210ENST00000556166 TEPSINQ96N21 525 aa13.78□□□□□ -0.2
GABRB3-210ENST00000556166 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
GABRB3-210ENST00000556166 TMEM39BQ9GZU3 492 aa13.78□□□□□ -0.2
GABRB3-210ENST00000556166 SLC4A4Q9Y6R1 1079 aa13.78□□□□□ -0.2
GABRB3-210ENST00000556166 MAST2Q6P0Q8 1798 aa13.78□□□□□ -0.2
GABRB3-210ENST00000556166 PATL2C9JE40 543 aaKnown RBP13.77□□□□□ -0.21
GABRB3-210ENST00000556166 SMIM22K7EJ46 135 aa13.77□□□□□ -0.21
GABRB3-210ENST00000556166 TRAF5O00463 557 aa13.77□□□□□ -0.21
GABRB3-210ENST00000556166 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
GABRB3-210ENST00000556166 ITGBL1O95965 494 aaPredicted RBP13.77□□□□□ -0.21
GABRB3-210ENST00000556166 EVX2Q03828 476 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms