RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 TTC9Q92623 222 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 LPIN3Q9BQK8 851 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 LACRTQ9GZZ8 138 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 EHMT1Q9H9B1 1298 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 NAGPAQ9UK23 515 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 TRIM33Q9UPN9 1127 aa4.33□□□□□ -1.72
MTHFD1-212ENST00000555858 H3BRJ5 948 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 PDPK1O15530 556 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 PPFIA3O75145 1194 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 ATE1O95260 518 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 GSTP1P09211 210 aaKnown RBP4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 ARAFP10398 606 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 ADH6P28332 368 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 CDC27P30260 824 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 CHMP4BP1P59074 171 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 RASGRF1Q13972 1273 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 PTPROQ16827 1216 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 KANK3Q6NY19 840 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 VWA5B2Q8N398 1253 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 C19orf47Q8N9M1 422 aaKnown RBP4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 ZCRB1Q8TBF4 217 aaKnown RBP4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 SH3TC2Q8TF17 1288 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 NANOS1Q8WY41 292 aaKnown RBP4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 KCNB2Q92953 911 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 BRINP2Q9C0B6 783 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 SOX17Q9H6I2 414 aaPredicted RBP4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 SH2B1Q9NRF2 756 aaPredicted RBP4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 MAPK8IP1Q9UQF2 711 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 PCDHB14Q9Y5E9 798 aa4.32□□□□□ -1.72
MTHFD1-212ENST00000555858 hCG_2014768A0A024R1R8 64 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 SOX1O00570 391 aaPredicted RBP4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 CDC45O75419 566 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 MX2P20592 715 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 EPHA1P21709 976 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 IBSPP21815 317 aaPredicted RBP4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 PTPN11Q06124 597 aaPredicted RBP4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 LRRFIP1Q32MZ4 808 aaKnown RBP4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 LARP1BQ659C4 914 aaKnown RBP4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 MAP1SQ66K74 1059 aaPredicted RBP4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 GDF6Q6KF10 455 aaPredicted RBP4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 PSAPL1Q6NUJ1 521 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 LILRB2Q8N423 598 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 APPBP2Q92624 585 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 GPATCH3Q96I76 525 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 DNAJC7Q99615 494 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 MDFIQ99750 246 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 TNKS2Q9H2K2 1166 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 TMX1Q9H3N1 280 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 ST7Q9NRC1 585 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 CACNA2D2Q9NY47 1150 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 KLF15Q9UIH9 416 aa4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 POLR3KQ9Y2Y1 108 aaPredicted RBP4.31□□□□□ -1.72
MTHFD1-212ENST00000555858 PRR36Q9H6K5 1346 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 ELOA3CA0A087WX78 387 aaPredicted RBP4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 ELOA3DA6NLF2 546 aaPredicted RBP4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 MEIS3P2A8K0S8 358 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 GRIN3BO60391 1043 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 CYP11A1P05108 521 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 ARL4DP49703 201 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 IGBP1P78318 339 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 HNRNPUQ00839 825 aaKnown RBP eCLIP4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 PPP2R5EQ16537 467 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 ELOA3BQ3SY89 546 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 HOMER1Q86YM7 354 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 ELOA3Q8NG57 546 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 WNT8BQ93098 351 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 TM9SF2Q99805 663 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 SLKQ9H2G2 1235 aaPredicted RBP4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 KRT82Q9NSB4 513 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 FANCLQ9NW38 375 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 GMPR2Q9P2T1 348 aaKnown RBP4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 NSFL1CQ9UNZ2 370 aaKnown RBP4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 PRKAB1Q9Y478 270 aa4.3□□□□□ -1.72
MTHFD1-212ENST00000555858 A0A1W2PQH9 124 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 PPP1R12AO14974 1030 aaPredicted RBP4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 DNAJC6O75061 913 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 RGS9O75916 674 aaPredicted RBP4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 GJB6O95452 261 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 ALAS2P22557 587 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 GUCY2CP25092 1073 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 MAP2K3P46734 347 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 PIP4K2BP78356 416 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 GSTM4Q03013 218 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 C19orf57Q0VDD7 668 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 MLECQ14165 292 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 MTERF2Q49AM1 385 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 ARSHQ5FYA8 562 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 TAF7LQ5H9L4 462 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 WIPI1Q5MNZ9 446 aaPredicted RBP4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 FAM117BQ6P1L5 589 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 MPRIPQ6WCQ1 1025 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 FCHSD1Q86WN1 690 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 TAB3Q8N5C8 712 aaPredicted RBP4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 GPBAR1Q8TDU6 330 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 MICAL1Q8TDZ2 1067 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 TMEM40Q8WWA1 233 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 ACSBG1Q96GR2 724 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 CORO1BQ9BR76 489 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 KANSL2Q9H9L4 492 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms