RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 ABCF2Q9UG63 623 aa11.47□□□□□ -0.57
SIX1-204ENST00000555627 A0A0C4DFX4 3053 aa11.46□□□□□ -0.57
SIX1-204ENST00000555627 CYP7A1P22680 504 aa11.46□□□□□ -0.57
SIX1-204ENST00000555627 DSG3P32926 999 aa11.46□□□□□ -0.57
SIX1-204ENST00000555627 CCDC93Q567U6 631 aa11.46□□□□□ -0.57
SIX1-204ENST00000555627 TTLL6Q8N841 843 aa11.46□□□□□ -0.57
SIX1-204ENST00000555627 WDR66Q8TBY9 1149 aa11.46□□□□□ -0.57
SIX1-204ENST00000555627 UPF3BQ9BZI7 483 aaKnown RBP11.46□□□□□ -0.57
SIX1-204ENST00000555627 TM6SF1Q9BZW5 370 aa11.46□□□□□ -0.57
SIX1-204ENST00000555627 ARMT1Q9H993 441 aa11.46□□□□□ -0.57
SIX1-204ENST00000555627 RAI14Q9P0K7 980 aa11.46□□□□□ -0.57
SIX1-204ENST00000555627 LRP2BPQ9P2M1 347 aa11.46□□□□□ -0.57
SIX1-204ENST00000555627 ZNF219Q9P2Y4 722 aaPredicted RBP11.46□□□□□ -0.57
SIX1-204ENST00000555627 GAKO14976 1311 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 PRKAB2O43741 272 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 C21orf2O43822 256 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 CPA1P15085 419 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 TGFB2P61812 414 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 DYNLL1P63167 89 aaKnown RBP11.45□□□□□ -0.58
SIX1-204ENST00000555627 KIAA2012Q0VF49 1180 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 CC2D2BQ6DHV5 1058 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 NAA16Q6N069 864 aaPredicted RBP11.45□□□□□ -0.58
SIX1-204ENST00000555627 ERICH6Q7L0X2 663 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 TBC1D10CQ8IV04 446 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 MIGA1Q8NAN2 632 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
SIX1-204ENST00000555627 TACC3Q9Y6A5 838 aa11.45□□□□□ -0.58
SIX1-204ENST00000555627 ATAD5Q96QE3 1844 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 MROH7-TTC4A0A0A0MT08 1334 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 YDJCA8MPS7 323 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 GSG1L2A8MUP6 293 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 K7ELQ4 463 aaPredicted RBP11.44□□□□□ -0.58
SIX1-204ENST00000555627 IGSF3O75054 1194 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 MAP2K1Q02750 393 aaPredicted RBP11.44□□□□□ -0.58
SIX1-204ENST00000555627 DIXDC1Q155Q3 683 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 ALX1Q15699 326 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 AOC3Q16853 763 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 HABP4Q5JVS0 413 aaKnown RBP11.44□□□□□ -0.58
SIX1-204ENST00000555627 TMED8Q6PL24 325 aaPredicted RBP11.44□□□□□ -0.58
SIX1-204ENST00000555627 HSCBQ8IWL3 235 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 ZGPATQ8N5A5 531 aaKnown RBP11.44□□□□□ -0.58
SIX1-204ENST00000555627 NKX2-3Q8TAU0 364 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 JAKMIP1Q96N16 626 aaKnown RBP11.44□□□□□ -0.58
SIX1-204ENST00000555627 PSMD1Q99460 953 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 EYA3Q99504 573 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 DBNDD1Q9H9R9 158 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
SIX1-204ENST00000555627 MYH4Q9Y623 1939 aa11.43□□□□□ -0.58
SIX1-204ENST00000555627 NFKBIEO00221 500 aa11.43□□□□□ -0.58
SIX1-204ENST00000555627 ECE2O60344 883 aa11.43□□□□□ -0.58
SIX1-204ENST00000555627 FRAT2O75474 233 aaPredicted RBP11.43□□□□□ -0.58
SIX1-204ENST00000555627 FGAP02671 866 aa11.43□□□□□ -0.58
SIX1-204ENST00000555627 CASTP20810 708 aaKnown RBP11.43□□□□□ -0.58
SIX1-204ENST00000555627 DDIT3P35638 169 aa11.43□□□□□ -0.58
SIX1-204ENST00000555627 ST3GAL1Q11201 340 aa11.43□□□□□ -0.58
SIX1-204ENST00000555627 BECN1Q14457 450 aa11.43□□□□□ -0.58
SIX1-204ENST00000555627 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
SIX1-204ENST00000555627 MFSD14BQ5SR56 506 aa11.43□□□□□ -0.58
SIX1-204ENST00000555627 DZIP1Q86YF9 867 aaKnown RBP11.43□□□□□ -0.58
SIX1-204ENST00000555627 MXD3Q9BW11 206 aa11.43□□□□□ -0.58
SIX1-204ENST00000555627 ROBO3Q96MS0 1386 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 NEDD4P46934 1319 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 MAGEB6P1A0A0J9YX57 407 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 SMIM22K7EJ46 135 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 LARGE1O95461 756 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 LDHBP07195 334 aaKnown RBP11.42□□□□□ -0.58
SIX1-204ENST00000555627 RPS6KB1P23443 525 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 NEK4P51957 841 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 AK2P54819 239 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 SOX10P56693 466 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 GTF2IP78347 998 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 DACT2Q5SW24 774 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 TBC1D22AQ8WUA7 517 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 ZC3H12CQ9C0D7 883 aaKnown RBP11.42□□□□□ -0.58
SIX1-204ENST00000555627 KCNQ5Q9NR82 932 aa11.42□□□□□ -0.58
SIX1-204ENST00000555627 PAPPA2Q9BXP8 1791 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 LTBP3Q9NS15 1303 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 ZC3H4Q9UPT8 1303 aaKnown RBP11.41□□□□□ -0.58
SIX1-204ENST00000555627 TCHHQ07283 1943 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 GLTPD2A6NH11 291 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 E7EWF7 191 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 ST18O60284 1047 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 ZKSCAN1P17029 563 aaPredicted RBP11.41□□□□□ -0.58
SIX1-204ENST00000555627 HAND2P61296 217 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 FKBP1AP62942 108 aaKnown RBP11.41□□□□□ -0.58
SIX1-204ENST00000555627 EVX2Q03828 476 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 TOB2Q14106 344 aaPredicted RBP11.41□□□□□ -0.58
SIX1-204ENST00000555627 RNF20Q5VTR2 975 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 SPTY2D1Q68D10 685 aaPredicted RBP11.41□□□□□ -0.58
SIX1-204ENST00000555627 RUFY3Q7L099 469 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 MB21D2Q8IYB1 491 aaPredicted RBP11.41□□□□□ -0.58
SIX1-204ENST00000555627 IFNL3Q8IZI9 196 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 SUPT20HQ8NEM7 779 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 SDR42E1Q8WUS8 393 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 TCEANC2Q96MN5 208 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 AATFQ9NY61 560 aaKnown RBP eCLIP11.41□□□□□ -0.58
SIX1-204ENST00000555627 PIM2Q9P1W9 311 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 DAGLAQ9Y4D2 1042 aa11.41□□□□□ -0.58
SIX1-204ENST00000555627 PATL2C9JE40 543 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms