RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 GNL2Q13823 731 aaKnown RBP11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 CCDC144BQ3MJ40 725 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 CYB5R4Q7L1T6 521 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 VPS37DQ86XT2 251 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 CCDC144CPQ8IYA2 1237 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 AOPEPQ8N6M6 819 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 WASF1Q92558 559 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 KRT23Q9C075 422 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 NAPBQ9H115 298 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 NID2Q14112 1375 aa11.52□□□□□ -0.56
RPGRIP1-208ENST00000555489 TIAM2Q8IVF5 1701 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 SMTNL1A8MU46 457 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 B4E1Z4 1266 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 KIF28PB7ZC32 967 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 RIOK3O14730 519 aaKnown RBP11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 IARSP41252 1262 aaKnown RBP11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 PARP10Q53GL7 1025 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 AXDND1Q5T1B0 1012 aaPredicted RBP11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 NFXL1Q6ZNB6 911 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 IGDCC4Q8TDY8 1250 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 MPHOSPH8Q99549 860 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 DOCK2Q92608 1830 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 RTL9Q8NET4 1388 aa11.52□□□□□ -0.57
RPGRIP1-208ENST00000555489 CTIFO43310 598 aaKnown RBP11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 PFKFB1P16118 471 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 U2AF2P26368 475 aaKnown RBP eCLIP11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 NLRP12P59046 1061 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 SART3Q15020 963 aaKnown RBP11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 TMEM67Q5HYA8 995 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 KRT40Q6A162 431 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 MICU3Q86XE3 530 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 IFNL3Q8IZI9 196 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 SYTL4Q96C24 671 aaPredicted RBP11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 CDCA7Q9BWT1 371 aaPredicted RBP11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 NACAP1Q9BZK3 213 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 LY9Q9HBG7 655 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 SLC12A7Q9Y666 1083 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 NEDD4P46934 1319 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 PNPLA7Q6ZV29 1317 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 FAM237AA0A1B0GTK4 181 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 CCDC69A6NI79 296 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 GOLGA8AA7E2F4 631 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 TNNT1P13805 278 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 PRKCSHP14314 528 aaPredicted RBP11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 RCAN1P53805 252 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 RASGRF1Q13972 1273 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 SYCP1Q15431 976 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 NTRK3Q16288 839 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 RAB11FIP4Q86YS3 637 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 C16orf45Q96MC5 204 aaPredicted RBP11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 KCND1Q9NSA2 647 aa11.51□□□□□ -0.57
RPGRIP1-208ENST00000555489 WNK3Q9BYP7 1800 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 IKBKBO14920 756 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 SYKP43405 635 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 TPD52L1Q16890 204 aaPredicted RBP11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 DPCR1Q3MIW9 517 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 CCDC152Q4G0S7 254 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 AKNAD1Q5T1N1 836 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 TMTC2Q8N394 836 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 MAGEB6Q8N7X4 407 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 UTP14AQ9BVJ6 771 aaKnown RBP11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 OSBPL5Q9H0X9 879 aaPredicted RBP11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 GJB4Q9NTQ9 266 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 HPSEQ9Y251 543 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 IFIT3O14879 490 aaKnown RBP11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 NRDCO43847 1150 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 MBD4O95243 580 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 SKILP12757 684 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 IFNAR1P17181 557 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 CDC27P30260 824 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 IGHMBP2P38935 993 aaKnown RBP11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 SSRP1Q08945 709 aaKnown RBP11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 MFSD6Q6ZSS7 791 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 STAG1Q8WVM7 1258 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 RNF41Q9H4P4 317 aaPredicted RBP11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 EPB41L4AQ9HCS5 686 aaPredicted RBP11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 CCDC87Q9NVE4 849 aa11.5□□□□□ -0.57
RPGRIP1-208ENST00000555489 DOT1LQ8TEK3 1739 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 CCDC196A0A1B0GTZ2 297 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 ERICH2A1L162 156 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 KIF2AO00139 706 aaPredicted RBP11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 MYO1BO43795 1136 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 CUTAO60888 179 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 FMNL1O95466 1100 aaPredicted RBP11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 FILIP1Q7Z7B0 1213 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 ELOA2Q8IYF1 753 aaPredicted RBP11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 TRIM22Q8IYM9 498 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 ZNF710Q8N1W2 664 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 CCDC150Q8NCX0 1101 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 PHKBQ93100 1093 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 CCDC94Q9BW85 323 aaPredicted RBP11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 ZSWIM5Q9P217 1185 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 TUBE1Q9UJT0 475 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 DENND2AQ9ULE3 1009 aa11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
RPGRIP1-208ENST00000555489 CICQ96RK0 1608 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms