RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 BLOC1S2Q6QNY1 142 aa12.13□□□□□ -0.47
NEK9-205ENST00000555405 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
NEK9-205ENST00000555405 OGFOD1Q8N543 542 aa12.13□□□□□ -0.47
NEK9-205ENST00000555405 TBC1D2Q9BYX2 928 aa12.13□□□□□ -0.47
NEK9-205ENST00000555405 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
NEK9-205ENST00000555405 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
NEK9-205ENST00000555405 CYP2D6P10635 497 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 GSTO1P78417 241 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 TRDNQ13061 729 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 SOGA3Q5TF21 947 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 KIF2CQ99661 725 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 VEZTQ9HBM0 779 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 CTNNA3Q9UI47 895 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 IRS2Q9Y4H2 1338 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 USP17L8P0C7I0 530 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 CXCL9Q07325 125 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 NECTIN1Q15223 517 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 ZKSCAN3Q9BRR0 538 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 CYP46A1Q9Y6A2 500 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 SHTN1A0MZ66 631 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 GSG1L2A8MUP6 293 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 RABEP1Q15276 862 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 RNF181Q9P0P0 153 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 ZNRF3Q9ULT6 936 aa12.12□□□□□ -0.47
NEK9-205ENST00000555405 AK9Q5TCS8 1911 aa12.11□□□□□ -0.47
NEK9-205ENST00000555405 TEKT1Q969V4 418 aa12.11□□□□□ -0.47
NEK9-205ENST00000555405 TDRD3Q9H7E2 651 aaKnown RBP12.11□□□□□ -0.47
NEK9-205ENST00000555405 PDRG1Q9NUG6 133 aa12.11□□□□□ -0.47
NEK9-205ENST00000555405 RGPD3A6NKT7 1758 aaPredicted RBP12.11□□□□□ -0.47
NEK9-205ENST00000555405 RGPD4Q7Z3J3 1758 aa12.11□□□□□ -0.47
NEK9-205ENST00000555405 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
NEK9-205ENST00000555405 SLURP2P0DP57 97 aa12.11□□□□□ -0.47
NEK9-205ENST00000555405 EIF6P56537 245 aaKnown RBP12.11□□□□□ -0.47
NEK9-205ENST00000555405 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
NEK9-205ENST00000555405 C15orf52Q6ZUT6 534 aaKnown RBP12.11□□□□□ -0.47
NEK9-205ENST00000555405 NEK1Q96PY6 1258 aa12.11□□□□□ -0.47
NEK9-205ENST00000555405 EPB41L4AQ9HCS5 686 aaPredicted RBP12.11□□□□□ -0.47
NEK9-205ENST00000555405 B4E1Z4 1266 aa12.1□□□□□ -0.47
NEK9-205ENST00000555405 CRKP46108 304 aa12.1□□□□□ -0.47
NEK9-205ENST00000555405 STRIP1Q5VSL9 837 aa12.1□□□□□ -0.47
NEK9-205ENST00000555405 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
NEK9-205ENST00000555405 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
NEK9-205ENST00000555405 DSCC1Q9BVC3 393 aa12.1□□□□□ -0.47
NEK9-205ENST00000555405 DAGLAQ9Y4D2 1042 aa12.1□□□□□ -0.47
NEK9-205ENST00000555405 DACT2Q5SW24 774 aa12.1□□□□□ -0.47
NEK9-205ENST00000555405 SLF2Q8IX21 1173 aa12.1□□□□□ -0.47
NEK9-205ENST00000555405 PSMD1Q99460 953 aa12.1□□□□□ -0.47
NEK9-205ENST00000555405 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
NEK9-205ENST00000555405 TCP10L2B9ZVM9 353 aa12.1□□□□□ -0.47
NEK9-205ENST00000555405 COL11A2P13942 1736 aaPredicted RBP12.1□□□□□ -0.47
NEK9-205ENST00000555405 E7EWF7 191 aa12.09□□□□□ -0.47
NEK9-205ENST00000555405 YBX3P16989 372 aaKnown RBP eCLIP12.09□□□□□ -0.47
NEK9-205ENST00000555405 PSMA5P28066 241 aa12.09□□□□□ -0.47
NEK9-205ENST00000555405 CFAP100Q494V2 611 aa12.09□□□□□ -0.47
NEK9-205ENST00000555405 STOX1Q6ZVD7 989 aa12.09□□□□□ -0.47
NEK9-205ENST00000555405 DYNLL2Q96FJ2 89 aa12.09□□□□□ -0.47
NEK9-205ENST00000555405 RIOK1Q9BRS2 568 aaKnown RBP12.09□□□□□ -0.47
NEK9-205ENST00000555405 MYO5AQ9Y4I1 1855 aaKnown RBP12.09□□□□□ -0.47
NEK9-205ENST00000555405 RAD21O60216 631 aa12.09□□□□□ -0.47
NEK9-205ENST00000555405 TBC1D10BQ4KMP7 808 aaPredicted RBP12.09□□□□□ -0.47
NEK9-205ENST00000555405 RTFDC1Q9BY42 306 aaPredicted RBP12.09□□□□□ -0.47
NEK9-205ENST00000555405 MROH7-TTC4A0A0A0MT08 1334 aa12.09□□□□□ -0.47
NEK9-205ENST00000555405 DLGAP5Q15398 846 aa12.09□□□□□ -0.47
NEK9-205ENST00000555405 NECAB1Q8N987 351 aa12.09□□□□□ -0.47
NEK9-205ENST00000555405 ISY1Q9ULR0 285 aaKnown RBP12.09□□□□□ -0.47
NEK9-205ENST00000555405 LRP5O75197 1615 aa12.08□□□□□ -0.47
NEK9-205ENST00000555405 FAM205AQ6ZU69 1335 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 FOXP2O15409 715 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 MFSD6Q6ZSS7 791 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 SAMD7Q7Z3H4 446 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 AMOTL1Q8IY63 956 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 SLC44A5Q8NCS7 719 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 HDAC9Q9UKV0 1011 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 AKAP11Q9UKA4 1901 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 GNAT2P19087 354 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 FOSBP53539 338 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 AK2P54819 239 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 FAM47AQ5JRC9 791 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 RSBN1LQ6PCB5 846 aaPredicted RBP12.08□□□□□ -0.48
NEK9-205ENST00000555405 TBC1D10CQ8IV04 446 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 BRF1Q92994 677 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 PRMT6Q96LA8 375 aaPredicted RBP12.08□□□□□ -0.48
NEK9-205ENST00000555405 MKNK2Q9HBH9 465 aa12.08□□□□□ -0.48
NEK9-205ENST00000555405 DCP1AQ9NPI6 582 aaPredicted RBP12.08□□□□□ -0.48
NEK9-205ENST00000555405 PRELPP51888 382 aa12.07□□□□□ -0.48
NEK9-205ENST00000555405 NFIAQ12857 509 aa12.07□□□□□ -0.48
NEK9-205ENST00000555405 NFXL1Q6ZNB6 911 aa12.07□□□□□ -0.48
NEK9-205ENST00000555405 Q6ZUG5 572 aa12.07□□□□□ -0.48
NEK9-205ENST00000555405 CCDC144CPQ8IYA2 1237 aa12.07□□□□□ -0.48
NEK9-205ENST00000555405 RXRAP19793 462 aa12.07□□□□□ -0.48
NEK9-205ENST00000555405 PPARAQ07869 468 aa12.07□□□□□ -0.48
NEK9-205ENST00000555405 GMPSP49915 693 aaPredicted RBP12.07□□□□□ -0.48
NEK9-205ENST00000555405 CCT2P78371 535 aaKnown RBP12.07□□□□□ -0.48
NEK9-205ENST00000555405 ATP2B2Q01814 1243 aa12.07□□□□□ -0.48
NEK9-205ENST00000555405 DDNO94850 711 aaPredicted RBP12.06□□□□□ -0.48
NEK9-205ENST00000555405 FOXD4L6Q3SYB3 417 aaPredicted RBP12.06□□□□□ -0.48
NEK9-205ENST00000555405 C9orf131Q5VYM1 1079 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 CDC42EP5Q6NZY7 148 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 FOXD4L3Q6VB84 417 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms