RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MYO1BO43795 1136 aa11.92□□□□□ -0.5
PSEN1-213ENST00000555386 PRAMEF18Q5VWM3 479 aa11.92□□□□□ -0.5
PSEN1-213ENST00000555386 NAA16Q6N069 864 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-213ENST00000555386 KRT26Q7Z3Y9 468 aa11.92□□□□□ -0.5
PSEN1-213ENST00000555386 MAGEB6Q8N7X4 407 aa11.92□□□□□ -0.5
PSEN1-213ENST00000555386 NSUN4Q96CB9 384 aaKnown RBP11.92□□□□□ -0.5
PSEN1-213ENST00000555386 HAUS7Q99871 368 aa11.92□□□□□ -0.5
PSEN1-213ENST00000555386 DAGLAQ9Y4D2 1042 aa11.92□□□□□ -0.5
PSEN1-213ENST00000555386 TCP10L2B9ZVM9 353 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 CYP7A1P22680 504 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 PDE1AP54750 535 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 MAP3K12Q12852 859 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 TTF1Q15361 905 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-213ENST00000555386 SLFNL1Q499Z3 407 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 SULF1Q8IWU6 871 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 PI4K2BQ8TCG2 481 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 ZNF384Q8TF68 577 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 TBC1D32Q96NH3 1257 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 TTC41PQ6P2S7 1318 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 DOCK2Q92608 1830 aa11.91□□□□□ -0.5
PSEN1-213ENST00000555386 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 GLRX3O76003 335 aaKnown RBP11.9□□□□□ -0.5
PSEN1-213ENST00000555386 CHGBP05060 677 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 BTDP43251 543 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 GSTO1P78417 241 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 SLC9C2Q5TAH2 1124 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 MAST2Q6P0Q8 1798 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 HHIPL2Q6UWX4 724 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 PLEKHM2Q8IWE5 1019 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 SLF2Q8IX21 1173 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 MIGA1Q8NAN2 632 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 ZC3H15Q8WU90 426 aaKnown RBP11.9□□□□□ -0.5
PSEN1-213ENST00000555386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.9□□□□□ -0.5
PSEN1-213ENST00000555386 ZDHHC15Q96MV8 337 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 NOL10Q9BSC4 688 aaKnown RBP11.9□□□□□ -0.5
PSEN1-213ENST00000555386 USP40Q9NVE5 1235 aa11.9□□□□□ -0.5
PSEN1-213ENST00000555386 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
PSEN1-213ENST00000555386 ZNF70Q9UC06 446 aaPredicted RBP11.9□□□□□ -0.5
PSEN1-213ENST00000555386 SALL3Q9BXA9 1300 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 LDHCP07864 332 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 MMP14P50281 582 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 HDLBPQ00341 1268 aaKnown RBP11.89□□□□□ -0.51
PSEN1-213ENST00000555386 TCP10Q12799 353 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 APOBEC3HQ6NTF7 200 aaKnown RBP11.89□□□□□ -0.51
PSEN1-213ENST00000555386 CDC42EP5Q6NZY7 148 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 CDC37L1Q7L3B6 337 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 ADGRA1Q86SQ6 560 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 MTMR14Q8NCE2 650 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 RILPL2Q969X0 211 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 ZBED3Q96IU2 234 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-213ENST00000555386 AATFQ9NY61 560 aaKnown RBP eCLIP11.89□□□□□ -0.51
PSEN1-213ENST00000555386 TMOD2Q9NZR1 351 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 SEC24BO95487 1268 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 PDE6AP16499 860 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 DYNLL1P63167 89 aaKnown RBP11.89□□□□□ -0.51
PSEN1-213ENST00000555386 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
PSEN1-213ENST00000555386 FSTL1Q12841 308 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 PICALMQ13492 652 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 PRKG1Q13976 671 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 APOBEC3FQ8IUX4 373 aaKnown RBP11.89□□□□□ -0.51
PSEN1-213ENST00000555386 FSD1Q9BTV5 496 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 STAP2Q9UGK3 403 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 TRPM7Q96QT4 1865 aa11.89□□□□□ -0.51
PSEN1-213ENST00000555386 ZNF532Q9HCE3 1301 aa11.88□□□□□ -0.51
PSEN1-213ENST00000555386 EIF5BO60841 1220 aaKnown RBP11.88□□□□□ -0.51
PSEN1-213ENST00000555386 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
PSEN1-213ENST00000555386 DEKP35659 375 aaKnown RBP11.88□□□□□ -0.51
PSEN1-213ENST00000555386 HTRA3P83110 453 aa11.88□□□□□ -0.51
PSEN1-213ENST00000555386 SH3RF3Q8TEJ3 882 aaPredicted RBP11.88□□□□□ -0.51
PSEN1-213ENST00000555386 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.88□□□□□ -0.51
PSEN1-213ENST00000555386 PGAP2Q9UHJ9 254 aa11.88□□□□□ -0.51
PSEN1-213ENST00000555386 CEP350Q5VT06 3117 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 GAKO14976 1311 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 CELF2O95319 508 aaKnown RBP11.87□□□□□ -0.51
PSEN1-213ENST00000555386 NFIAQ12857 509 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 RASA3Q14644 834 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 SLC4A8Q2Y0W8 1093 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 TEX11Q8IYF3 940 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 CDCA5Q96FF9 252 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 MRIQ9BWK5 157 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 TMEM39BQ9GZU3 492 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 DEFB129Q9H1M3 183 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 CDK5RAP2Q96SN8 1893 aa11.87□□□□□ -0.51
PSEN1-213ENST00000555386 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
PSEN1-213ENST00000555386 GPR75-ASB3A0A0A6YYF3 556 aa11.86□□□□□ -0.51
PSEN1-213ENST00000555386 BAG3O95817 575 aa11.86□□□□□ -0.51
PSEN1-213ENST00000555386 TTLL12Q14166 644 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-213ENST00000555386 BMP2KLQ5H9B9 411 aa11.86□□□□□ -0.51
PSEN1-213ENST00000555386 ZSCAN29Q8IWY8 852 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-213ENST00000555386 CDAN1Q8IWY9 1227 aa11.86□□□□□ -0.51
PSEN1-213ENST00000555386 KBTBD3Q8NAB2 608 aa11.86□□□□□ -0.51
PSEN1-213ENST00000555386 FZD1Q9UP38 647 aa11.86□□□□□ -0.51
PSEN1-213ENST00000555386 MAGEB6P1A0A0J9YX57 407 aa11.85□□□□□ -0.51
PSEN1-213ENST00000555386 ADD2P35612 726 aa11.85□□□□□ -0.51
PSEN1-213ENST00000555386 TNNI2P48788 182 aa11.85□□□□□ -0.51
PSEN1-213ENST00000555386 TNFAIP1Q13829 316 aa11.85□□□□□ -0.51
PSEN1-213ENST00000555386 ZSCAN25Q6NSZ9 544 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms