RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, human

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-208	ENST00000554929	GJA5	P36382	358 aa		12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	TAF1C	Q15572	869 aa	Predicted RBP	12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	TWISTNB	Q3B726	338 aa	Predicted RBP	12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	UBE2Q1	Q7Z7E8	422 aa		12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	FBXW7	Q969H0	707 aa		12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	MXD3	Q9BW11	206 aa		12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	ARHGAP39	Q9C0H5	1083 aa		12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	ZFYVE28	Q9HCC9	887 aa		12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	MBIP	Q9NS73	344 aa		12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	GGA1	Q9UJY5	639 aa		12.81	□□□□□ -0.36
SRSF5-208	ENST00000554929	DLG5	Q8TDM6	1919 aa		12.8	□□□□□ -0.36
SRSF5-208	ENST00000554929	GJA8	P48165	433 aa		12.8	□□□□□ -0.36
SRSF5-208	ENST00000554929	BECN1	Q14457	450 aa		12.8	□□□□□ -0.36
SRSF5-208	ENST00000554929	KIF22	Q14807	665 aa		12.8	□□□□□ -0.36
SRSF5-208	ENST00000554929	MAP3K11	Q16584	847 aa		12.8	□□□□□ -0.36
SRSF5-208	ENST00000554929	LAMA3	Q16787	3333 aa		12.79	□□□□□ -0.36
SRSF5-208	ENST00000554929	PSME4	Q14997	1843 aa		12.79	□□□□□ -0.36
SRSF5-208	ENST00000554929	TESPA1	A2RU30	521 aa	Predicted RBP	12.79	□□□□□ -0.36
SRSF5-208	ENST00000554929	EIF5B	O60841	1220 aa	Known RBP	12.79	□□□□□ -0.36
SRSF5-208	ENST00000554929	FARP2	O94887	1054 aa	Predicted RBP	12.79	□□□□□ -0.36
SRSF5-208	ENST00000554929	RPS8	P62241	208 aa	Known RBP	12.79	□□□□□ -0.36
SRSF5-208	ENST00000554929	HSP90AB3P	Q58FF7	597 aa		12.79	□□□□□ -0.36
SRSF5-208	ENST00000554929	PODXL2	Q9NZ53	605 aa		12.79	□□□□□ -0.36
SRSF5-208	ENST00000554929	RAPGEFL1	Q9UHV5	662 aa		12.79	□□□□□ -0.36
SRSF5-208	ENST00000554929	ZNF646	O15015	1829 aa	Predicted RBP	12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	COL4A1	P02462	1669 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	HTATSF1	O43719	755 aa	Known RBP	12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	TBC1D12	O60347	775 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	ANXA1	P04083	346 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	GJB1	P08034	283 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	CCL5	P13501	91 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	BCAM	P50895	628 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	EIF4A1	P60842	406 aa	Known RBP	12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	AIMP1	Q12904	312 aa	Known RBP	12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	NBR1	Q14596	966 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	SF3B3	Q15393	1217 aa	Known RBP	12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	PODN	Q7Z5L7	613 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	RNF208	Q9H0X6	261 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	DEFB129	Q9H1M3	183 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	LAMB1	P07942	1786 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	ZSWIM8	A7E2V4	1837 aa		12.78	□□□□□ -0.36
SRSF5-208	ENST00000554929	CHL1	O00533	1208 aa		12.77	□□□□□ -0.37
SRSF5-208	ENST00000554929	EIF2S2	P20042	333 aa	Known RBP	12.77	□□□□□ -0.37
SRSF5-208	ENST00000554929	FAM89A	Q96GI7	184 aa		12.77	□□□□□ -0.37
SRSF5-208	ENST00000554929	LARP6	Q9BRS8	491 aa	Known RBP	12.77	□□□□□ -0.37
SRSF5-208	ENST00000554929	RTN4	Q9NQC3	1192 aa	Known RBP	12.77	□□□□□ -0.37
SRSF5-208	ENST00000554929	BIN2	Q9UBW5	565 aa	Predicted RBP	12.77	□□□□□ -0.37
SRSF5-208	ENST00000554929	BMP8B	P34820	402 aa		12.76	□□□□□ -0.37
SRSF5-208	ENST00000554929	IREB2	P48200	963 aa	Known RBP	12.76	□□□□□ -0.37
SRSF5-208	ENST00000554929	PRMT2	P55345	433 aa		12.76	□□□□□ -0.37
SRSF5-208	ENST00000554929	LACTB	P83111	547 aa	Predicted RBP	12.76	□□□□□ -0.37
SRSF5-208	ENST00000554929	LRIT3	Q3SXY7	679 aa		12.76	□□□□□ -0.37
SRSF5-208	ENST00000554929	OPTN	Q96CV9	577 aa		12.76	□□□□□ -0.37
SRSF5-208	ENST00000554929	GDF15	Q99988	308 aa		12.76	□□□□□ -0.37
SRSF5-208	ENST00000554929	RPTOR	Q8N122	1335 aa		12.76	□□□□□ -0.37
SRSF5-208	ENST00000554929	CCL15-CCL14	A0A0B4J2E2	113 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	UNCX	A6NJT0	531 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	GNRH1	P01148	92 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	GRK4	P32298	578 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	NUCB1	Q02818	461 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	PDIA6	Q15084	440 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	CCL15	Q16663	113 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	PROSER3	Q2NL68	480 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	DACT2	Q5SW24	774 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	COPS6	Q7L5N1	327 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	LRP10	Q7Z4F1	713 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	ANKRD13A	Q8IZ07	590 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	RAET1E	Q8TD07	263 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	U2AF1L4	Q8WU68	220 aa	Known RBP	12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	BRI3BP	Q8WY22	251 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	RNF166	Q96A37	237 aa	Predicted RBP	12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	DDX27	Q96GQ7	796 aa	Known RBP	12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	ELP3	Q9H9T3	547 aa		12.75	□□□□□ -0.37
SRSF5-208	ENST00000554929	PTPRC	P08575	1304 aa		12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	ARHGAP33	O14559	1287 aa		12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	USP2	O75604	605 aa	Predicted RBP	12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	WDHD1	O75717	1129 aa	Predicted RBP	12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	SUPT20HL1	Q3ZLR7	823 aa		12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	FAM43A	Q8N2R8	423 aa		12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	TSPYL6	Q8N831	410 aa		12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	C8orf58	Q8NAV2	365 aa		12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	BBX	Q8WY36	941 aa	Predicted RBP	12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	SEC31B	Q9NQW1	1179 aa		12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.74	□□□□□ -0.37
SRSF5-208	ENST00000554929	SSC5D	A1L4H1	1573 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	MYO3B	Q8WXR4	1341 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	UBXN2A	P68543	259 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	CHD1L	Q86WJ1	897 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	KIAA0825	Q8IV33	1275 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	XAGE3	Q8WTP9	111 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	FAM122A	Q96E09	287 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	TRIM47	Q96LD4	638 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	FAM161B	Q96MY7	647 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	TBC1D32	Q96NH3	1257 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	BABAM1	Q9NWV8	329 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	RIPOR2	Q9Y4F9	1068 aa		12.73	□□□□□ -0.37
SRSF5-208	ENST00000554929	IRS2	Q9Y4H2	1338 aa		12.72	□□□□□ -0.37
SRSF5-208	ENST00000554929	TLR2	O60603	784 aa		12.72	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms