RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 PPP1R7Q15435 360 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 TAF7Q15545 349 aaPredicted RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 MCMDC2Q4G0Z9 681 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 HSP90AA5PQ58FG0 334 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 SWT1Q5T5J6 900 aaKnown RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 CNPY4Q8N129 248 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 ARHGAP18Q8N392 663 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 FNBP4Q8N3X1 1017 aaPredicted RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 SMC6Q96SB8 1091 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 SEC62Q99442 399 aaKnown RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 CDK19Q9BWU1 502 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 BOLA2Q9H3K6 86 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 BICC1Q9H694 974 aaKnown RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 CEP126Q9P2H0 1117 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 RTEL1-TNFRSF6BF6WH68 1400 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 ACTN4O43707 911 aaKnown RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 POLR3DP05423 398 aaPredicted RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 H2AFXP16104 143 aaPredicted RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 CCT2P78371 535 aaKnown RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 NBPF6Q5VWK0 638 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 RRAGBQ5VZM2 374 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 NBPF5PQ86XG9 351 aaPredicted RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 NBPF4Q96M43 638 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 C14orf93Q9H972 538 aaKnown RBP7.2□□□□□ -1.26
PCNX1-207ENST00000554691 THEGQ9P2T0 379 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 NRBP1Q9UHY1 535 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 KIAA0232Q92628 1395 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 DUOX2Q9NRD8 1548 aa7.2□□□□□ -1.26
PCNX1-207ENST00000554691 HMGB1P1B2RPK0 211 aaPredicted RBP7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CMA1P23946 247 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 METAP2P50579 478 aaKnown RBP eCLIP7.19□□□□□ -1.26
PCNX1-207ENST00000554691 VWA3BQ502W6 1294 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 RILPL1Q5EBL4 403 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CCDC197Q8NCU1 140 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CCDC110Q8TBZ0 833 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 PANX2Q96RD6 677 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 TSC22D3Q99576 134 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 ALG1Q9BT22 464 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 NKIRAS1Q9NYS0 192 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 SLC12A7Q9Y666 1083 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 A0A087WZG4 1122 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 GSTTP1A0A1W2PQM5 241 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CFAP73A6NFT4 308 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CREB3O43889 395 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CAPZA3Q96KX2 299 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 SELENOSQ9BQE4 189 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 HOMER3Q9NSC5 361 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 RCOR1Q9UKL0 485 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 NFE2L3Q9Y4A8 694 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 HYOU1Q9Y4L1 999 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 PPIP5K1Q6PFW1 1433 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CETN3O15182 167 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 NR1I2O75469 434 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 VIMP08670 466 aaKnown RBP7.19□□□□□ -1.26
PCNX1-207ENST00000554691 MTX1Q13505 466 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CDC37L1Q7L3B6 337 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 NOX5Q96PH1 765 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CABP1Q9NZU7 370 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 MYOM2P54296 1465 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 A0A1B0GVL5 298 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 TULP2O00295 520 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 ERCC5P28715 1186 aaPredicted RBP7.19□□□□□ -1.26
PCNX1-207ENST00000554691 PEX19P40855 299 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CCDC152Q4G0S7 254 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 MSL3Q8N5Y2 521 aaKnown RBP7.19□□□□□ -1.26
PCNX1-207ENST00000554691 CEP63Q96MT8 703 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 PRAM1Q96QH2 718 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 LARP6Q9BRS8 491 aaKnown RBP7.19□□□□□ -1.26
PCNX1-207ENST00000554691 ZRANB1Q9UGI0 708 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 PARP2Q9UGN5 583 aa7.19□□□□□ -1.26
PCNX1-207ENST00000554691 ADGBQ8N7X0 1667 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 CIB2O75838 187 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 KRT18P05783 430 aaKnown RBP7.18□□□□□ -1.26
PCNX1-207ENST00000554691 UBXN1Q04323 297 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 NBPF20Q3BBV1 942 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 GLE1Q53GS7 698 aaKnown RBP7.18□□□□□ -1.26
PCNX1-207ENST00000554691 CCDC170Q8IYT3 715 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 OR8K1Q8NGG5 319 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 IFT81Q8WYA0 676 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 THUMPD2Q9BTF0 503 aaKnown RBP7.18□□□□□ -1.26
PCNX1-207ENST00000554691 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.18□□□□□ -1.26
PCNX1-207ENST00000554691 DBF4Q9UBU7 674 aaPredicted RBP7.18□□□□□ -1.26
PCNX1-207ENST00000554691 HDAC9Q9UKV0 1011 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 KDM5AP29375 1690 aaKnown RBP7.18□□□□□ -1.26
PCNX1-207ENST00000554691 KLF18A0A0U1RQI7 1052 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 TARSL2A2RTX5 802 aaKnown RBP7.18□□□□□ -1.26
PCNX1-207ENST00000554691 TRIM75PA6NK02 468 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 KRT9P35527 623 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 NYAP1Q6ZVC0 841 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 VSTM4Q8IW00 320 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 THEMISQ8N1K5 641 aaPredicted RBP7.18□□□□□ -1.26
PCNX1-207ENST00000554691 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.18□□□□□ -1.26
PCNX1-207ENST00000554691 KCNH3Q9ULD8 1083 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 A2MP01023 1474 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 SYNRGQ9UMZ2 1314 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 A0A1W2PRG0 241 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 SLC27A2O14975 620 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 ZBTB22O15209 634 aa7.18□□□□□ -1.26
PCNX1-207ENST00000554691 HPDP32754 393 aaPredicted RBP7.18□□□□□ -1.26
PCNX1-207ENST00000554691 WHAMMQ8TF30 809 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms