RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 RBM8AQ9Y5S9 174 aaKnown RBP17.17■□□□□ 0.34
SHOX2-206ENST00000554685 SCN9AQ15858 1988 aa17.17■□□□□ 0.34
SHOX2-206ENST00000554685 PATL2C9JE40 543 aaKnown RBP17.16■□□□□ 0.34
SHOX2-206ENST00000554685 ZKSCAN1P17029 563 aaPredicted RBP17.16■□□□□ 0.34
SHOX2-206ENST00000554685 HSPA4P34932 840 aa17.16■□□□□ 0.34
SHOX2-206ENST00000554685 BTDP43251 543 aa17.16■□□□□ 0.34
SHOX2-206ENST00000554685 CRKP46108 304 aa17.16■□□□□ 0.34
SHOX2-206ENST00000554685 ANAPC15P60006 121 aa17.16■□□□□ 0.34
SHOX2-206ENST00000554685 C1QBPQ07021 282 aaKnown RBP17.16■□□□□ 0.34
SHOX2-206ENST00000554685 GIMAP6Q6P9H5 292 aa17.16■□□□□ 0.34
SHOX2-206ENST00000554685 LCORLQ8N3X6 602 aa17.16■□□□□ 0.34
SHOX2-206ENST00000554685 MXD3Q9BW11 206 aa17.16■□□□□ 0.34
SHOX2-206ENST00000554685 AATFQ9NY61 560 aaKnown RBP eCLIP17.16■□□□□ 0.34
SHOX2-206ENST00000554685 SLC4A4Q9Y6R1 1079 aa17.16■□□□□ 0.34
SHOX2-206ENST00000554685 ZMYM6O95789 1325 aa17.16■□□□□ 0.34
SHOX2-206ENST00000554685 APPP05067 770 aa17.15■□□□□ 0.34
SHOX2-206ENST00000554685 PRELPP51888 382 aa17.15■□□□□ 0.34
SHOX2-206ENST00000554685 ALX1Q15699 326 aa17.15■□□□□ 0.34
SHOX2-206ENST00000554685 ZDHHC15Q96MV8 337 aa17.15■□□□□ 0.34
SHOX2-206ENST00000554685 GMLQ99445 158 aa17.15■□□□□ 0.34
SHOX2-206ENST00000554685 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
SHOX2-206ENST00000554685 DAGLAQ9Y4D2 1042 aa17.15■□□□□ 0.34
SHOX2-206ENST00000554685 SCNN1DP51172 638 aa17.14■□□□□ 0.33
SHOX2-206ENST00000554685 DYNLL1P63167 89 aaKnown RBP17.14■□□□□ 0.33
SHOX2-206ENST00000554685 NECTIN1Q15223 517 aa17.14■□□□□ 0.33
SHOX2-206ENST00000554685 VPS53Q5VIR6 699 aa17.14■□□□□ 0.33
SHOX2-206ENST00000554685 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
SHOX2-206ENST00000554685 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
SHOX2-206ENST00000554685 ZC3H4Q9UPT8 1303 aaKnown RBP17.14■□□□□ 0.33
SHOX2-206ENST00000554685 ZNF646O15015 1829 aaPredicted RBP17.14■□□□□ 0.33
SHOX2-206ENST00000554685 USP17L8P0C7I0 530 aa17.13■□□□□ 0.33
SHOX2-206ENST00000554685 IMMTQ16891 758 aaKnown RBP17.13■□□□□ 0.33
SHOX2-206ENST00000554685 DPF2Q92785 391 aa17.13■□□□□ 0.33
SHOX2-206ENST00000554685 NAPBQ9H115 298 aa17.13■□□□□ 0.33
SHOX2-206ENST00000554685 GSG1L2A8MUP6 293 aa17.12■□□□□ 0.33
SHOX2-206ENST00000554685 USP5P45974 858 aa17.12■□□□□ 0.33
SHOX2-206ENST00000554685 TDO2P48775 406 aa17.12■□□□□ 0.33
SHOX2-206ENST00000554685 RBM5P52756 815 aaKnown RBP eCLIP17.12■□□□□ 0.33
SHOX2-206ENST00000554685 KRT32Q14532 448 aa17.12■□□□□ 0.33
SHOX2-206ENST00000554685 C9orf131Q5VYM1 1079 aa17.12■□□□□ 0.33
SHOX2-206ENST00000554685 CREB3L3Q68CJ9 461 aa17.12■□□□□ 0.33
SHOX2-206ENST00000554685 IFNL3Q8IZI9 196 aa17.12■□□□□ 0.33
SHOX2-206ENST00000554685 KCNB2Q92953 911 aa17.12■□□□□ 0.33
SHOX2-206ENST00000554685 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
SHOX2-206ENST00000554685 SLC27A2O14975 620 aa17.11■□□□□ 0.33
SHOX2-206ENST00000554685 FGAP02671 866 aa17.11■□□□□ 0.33
SHOX2-206ENST00000554685 DLGAP5Q15398 846 aa17.11■□□□□ 0.33
SHOX2-206ENST00000554685 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
SHOX2-206ENST00000554685 TEX11Q8IYF3 940 aa17.11■□□□□ 0.33
SHOX2-206ENST00000554685 GPC2Q8N158 579 aa17.11■□□□□ 0.33
SHOX2-206ENST00000554685 SH3RF3Q8TEJ3 882 aaPredicted RBP17.11■□□□□ 0.33
SHOX2-206ENST00000554685 IL17RAQ96F46 866 aa17.11■□□□□ 0.33
SHOX2-206ENST00000554685 ZBTB12Q9Y330 459 aaPredicted RBP17.11■□□□□ 0.33
SHOX2-206ENST00000554685 GJA3Q9Y6H8 435 aa17.11■□□□□ 0.33
SHOX2-206ENST00000554685 DICER1Q9UPY3 1922 aaKnown RBP17.11■□□□□ 0.33
SHOX2-206ENST00000554685 ZNF213O14771 459 aa17.1■□□□□ 0.33
SHOX2-206ENST00000554685 FOXP2O15409 715 aa17.1■□□□□ 0.33
SHOX2-206ENST00000554685 PRKAB2O43741 272 aa17.1■□□□□ 0.33
SHOX2-206ENST00000554685 ANP32AP39687 249 aaKnown RBP17.1■□□□□ 0.33
SHOX2-206ENST00000554685 RHBDL3P58872 404 aa17.1■□□□□ 0.33
SHOX2-206ENST00000554685 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
SHOX2-206ENST00000554685 CFAP100Q494V2 611 aa17.1■□□□□ 0.33
SHOX2-206ENST00000554685 MTMR14Q8NCE2 650 aa17.1■□□□□ 0.33
SHOX2-206ENST00000554685 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
SHOX2-206ENST00000554685 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
SHOX2-206ENST00000554685 RBM19Q9Y4C8 960 aaKnown RBP17.1■□□□□ 0.33
SHOX2-206ENST00000554685 ZNF541Q9H0D2 1346 aa17.1■□□□□ 0.33
SHOX2-206ENST00000554685 GMPSP49915 693 aaPredicted RBP17.09■□□□□ 0.33
SHOX2-206ENST00000554685 ZNF280AP59817 542 aaPredicted RBP17.09■□□□□ 0.33
SHOX2-206ENST00000554685 RABEP1Q15276 862 aa17.09■□□□□ 0.33
SHOX2-206ENST00000554685 APOBEC3HQ6NTF7 200 aaKnown RBP17.09■□□□□ 0.33
SHOX2-206ENST00000554685 SDR42E1Q8WUS8 393 aa17.09■□□□□ 0.33
SHOX2-206ENST00000554685 EPB41L4AQ9HCS5 686 aaPredicted RBP17.09■□□□□ 0.33
SHOX2-206ENST00000554685 TMOD2Q9NZR1 351 aa17.09■□□□□ 0.33
SHOX2-206ENST00000554685 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
SHOX2-206ENST00000554685 SBF1O95248 1867 aa17.08■□□□□ 0.33
SHOX2-206ENST00000554685 MYO1BO43795 1136 aa17.08■□□□□ 0.32
SHOX2-206ENST00000554685 CYP21A2P08686 494 aa17.08■□□□□ 0.32
SHOX2-206ENST00000554685 PSMA5P28066 241 aa17.08■□□□□ 0.32
SHOX2-206ENST00000554685 DPY19L2Q6NUT2 758 aa17.08■□□□□ 0.32
SHOX2-206ENST00000554685 CDC42EP5Q6NZY7 148 aa17.08■□□□□ 0.32
SHOX2-206ENST00000554685 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.32
SHOX2-206ENST00000554685 TIAM2Q8IVF5 1701 aa17.07■□□□□ 0.32
SHOX2-206ENST00000554685 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
SHOX2-206ENST00000554685 H7C1D1 291 aa17.07■□□□□ 0.32
SHOX2-206ENST00000554685 SLC3A2P08195 630 aaKnown RBP17.07■□□□□ 0.32
SHOX2-206ENST00000554685 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
SHOX2-206ENST00000554685 SBK1Q52WX2 424 aa17.07■□□□□ 0.32
SHOX2-206ENST00000554685 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
SHOX2-206ENST00000554685 TGFBRAP1Q8WUH2 860 aa17.07■□□□□ 0.32
SHOX2-206ENST00000554685 TM6SF1Q9BZW5 370 aa17.07■□□□□ 0.32
SHOX2-206ENST00000554685 MYOZ2Q9NPC6 264 aa17.07■□□□□ 0.32
SHOX2-206ENST00000554685 PALD1Q9ULE6 856 aa17.07■□□□□ 0.32
SHOX2-206ENST00000554685 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
SHOX2-206ENST00000554685 PCP11498 1178 aaKnown RBP17.06■□□□□ 0.32
SHOX2-206ENST00000554685 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
SHOX2-206ENST00000554685 IDI2Q9BXS1 227 aa17.06■□□□□ 0.32
SHOX2-206ENST00000554685 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms