RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 ASAP1Q9ULH1 1129 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 SMG6Q86US8 1419 aaKnown RBP6.74□□□□□ -1.33
ATXN3-229ENST00000554672 KAT6BQ8WYB5 2073 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 PXDNLA1KZ92 1463 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 RTL1A6NKG5 1358 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 IGHA1P01876 353 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 GYS1P13807 737 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-229ENST00000554672 COL8A1P27658 744 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 ARSJQ5FYB0 599 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-229ENST00000554672 HDGFL1Q5TGJ6 251 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 LINC00114Q6XXX2 140 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 SLCO4C1Q6ZQN7 724 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 KIAA1024Q9UPX6 916 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 LY75O60449 1722 aa6.73□□□□□ -1.33
ATXN3-229ENST00000554672 INSRP06213 1382 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 DCDC2BA2VCK2 349 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 BACH1O14867 736 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 RAD21O60216 631 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 RPS6KA4O75676 772 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 ARAFP10398 606 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 EPXP11678 715 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 CD33P20138 364 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 CLDN10P78369 228 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 FLIIQ13045 1269 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 TBCELQ5QJ74 424 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 IFNL2Q8IZJ0 200 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 BTBD6Q96KE9 485 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 GGNBP2Q9H3C7 697 aa6.72□□□□□ -1.33
ATXN3-229ENST00000554672 KIF24Q5T7B8 1368 aa6.71□□□□□ -1.33
ATXN3-229ENST00000554672 C10orf71Q711Q0 1435 aa6.71□□□□□ -1.34
ATXN3-229ENST00000554672 KRBA1A5PL33 1030 aa6.71□□□□□ -1.34
ATXN3-229ENST00000554672 GLTPD2A6NH11 291 aa6.71□□□□□ -1.34
ATXN3-229ENST00000554672 NEURL1BA8MQ27 555 aa6.71□□□□□ -1.34
ATXN3-229ENST00000554672 TEAD4Q15561 434 aa6.71□□□□□ -1.34
ATXN3-229ENST00000554672 SH3PXD2AQ5TCZ1 1133 aa6.71□□□□□ -1.34
ATXN3-229ENST00000554672 CICQ96RK0 1608 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-229ENST00000554672 USP17L3A6NCW0 530 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 USP17L4A6NCW7 530 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 ERVV-2B6SEH9 535 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 EML1O00423 815 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 KHNYNO15037 678 aaKnown RBP6.7□□□□□ -1.34
ATXN3-229ENST00000554672 EFSO43281 561 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 PROCP04070 461 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 PHKG2P15735 406 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 LMNB1P20700 586 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 NOS2P35228 1153 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 USP17L2Q6R6M4 530 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 USP17L1Q7RTZ2 530 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 SLC9A9Q8IVB4 645 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 PLEKHM2Q8IWE5 1019 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 WWC1Q8IX03 1113 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 TESK2Q96S53 571 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 SPOCK3Q9BQ16 436 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 SUV39H2Q9H5I1 410 aa6.7□□□□□ -1.34
ATXN3-229ENST00000554672 FLT4P35916 1363 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 ST20-MTHFSA0A0A6YYL1 179 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 DKK1O94907 266 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 HSP90AB1P08238 724 aaKnown RBP6.69□□□□□ -1.34
ATXN3-229ENST00000554672 FAM157BP0CG42 384 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 CHRNA5P30532 468 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 GRIN2CQ14957 1233 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 SAMD5Q5TGI4 173 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 TPCN2Q8NHX9 752 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 MKL2Q9ULH7 1088 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 KCPQ6ZWJ8 1503 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 CNTNAP4Q9C0A0 1308 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 TUBGCP6Q96RT7 1819 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 TONSLQ96HA7 1378 aa6.69□□□□□ -1.34
ATXN3-229ENST00000554672 USP54Q70EL1 1684 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 C4BP0C0L5 1744 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 MSTNO14793 375 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-229ENST00000554672 ATP9BO43861 1147 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 TM4SF1P30408 202 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 DGKGP49619 791 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 DDR1Q08345 913 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 CCDC102BQ68D86 513 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 BICDL1Q6ZP65 573 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 CLUAP1Q96AJ1 413 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 WASHC2AQ641Q2 1341 aa6.68□□□□□ -1.34
ATXN3-229ENST00000554672 MON2Q7Z3U7 1717 aa6.67□□□□□ -1.34
ATXN3-229ENST00000554672 DOT1LQ8TEK3 1739 aa6.67□□□□□ -1.34
ATXN3-229ENST00000554672 AMPD1P23109 780 aa6.67□□□□□ -1.34
ATXN3-229ENST00000554672 CTCFP49711 727 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-229ENST00000554672 PCBP4P57723 403 aaKnown RBP6.67□□□□□ -1.34
ATXN3-229ENST00000554672 CABP4P57796 275 aa6.67□□□□□ -1.34
ATXN3-229ENST00000554672 LRRC69Q6ZNQ3 347 aa6.67□□□□□ -1.34
ATXN3-229ENST00000554672 TRIM50Q86XT4 487 aa6.67□□□□□ -1.34
ATXN3-229ENST00000554672 OGFOD1Q8N543 542 aa6.67□□□□□ -1.34
ATXN3-229ENST00000554672 TTLL6Q8N841 843 aa6.67□□□□□ -1.34
ATXN3-229ENST00000554672 TSPAN10Q9H1Z9 355 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-229ENST00000554672 SRP68Q9UHB9 627 aaKnown RBP6.67□□□□□ -1.34
ATXN3-229ENST00000554672 MKRN1Q9UHC7 482 aaKnown RBP6.67□□□□□ -1.34
ATXN3-229ENST00000554672 FAM208AQ9UK61 1670 aaKnown RBP6.67□□□□□ -1.34
ATXN3-229ENST00000554672 LTN1O94822 1766 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms