RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 UFL1O94874 794 aa3.71□□□□□ -1.81
SYNE2-212ENST00000554584 IRX3P78415 501 aaPredicted RBP3.71□□□□□ -1.81
SYNE2-212ENST00000554584 OCRLQ01968 901 aa3.71□□□□□ -1.81
SYNE2-212ENST00000554584 TMEM266Q2M3C6 531 aa3.71□□□□□ -1.81
SYNE2-212ENST00000554584 GTPBP4Q9BZE4 634 aaKnown RBP3.71□□□□□ -1.81
SYNE2-212ENST00000554584 SLC7A5P2Q9GIP4 190 aa3.71□□□□□ -1.81
SYNE2-212ENST00000554584 CYP46A1Q9Y6A2 500 aa3.71□□□□□ -1.81
SYNE2-212ENST00000554584 EIF3AQ14152 1382 aaKnown RBP3.71□□□□□ -1.81
SYNE2-212ENST00000554584 RHOXF2BP0C7M4 288 aa3.71□□□□□ -1.81
SYNE2-212ENST00000554584 CCDC148Q8NFR7 591 aa3.71□□□□□ -1.81
SYNE2-212ENST00000554584 RHOXF2Q9BQY4 288 aa3.71□□□□□ -1.81
SYNE2-212ENST00000554584 CACYBPQ9HB71 228 aaKnown RBP3.71□□□□□ -1.81
SYNE2-212ENST00000554584 IFIT5Q13325 482 aaKnown RBP3.71□□□□□ -1.81
SYNE2-212ENST00000554584 SPICE1Q8N0Z3 855 aa3.71□□□□□ -1.81
SYNE2-212ENST00000554584 SRP68Q9UHB9 627 aaKnown RBP3.71□□□□□ -1.81
SYNE2-212ENST00000554584 CCNL1Q9UK58 526 aaPredicted RBP3.71□□□□□ -1.81
SYNE2-212ENST00000554584 CCDC192P0DO97 292 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 STMN2Q93045 179 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 RABGAP1Q9Y3P9 1069 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 PPFIA2O75334 1257 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 HMBSP08397 361 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NSUN2Q08J23 767 aaKnown RBP eCLIP3.71□□□□□ -1.82
SYNE2-212ENST00000554584 KLHL7Q8IXQ5 586 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 ANKRD42Q8N9B4 389 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 THRAP3Q9Y2W1 955 aaKnown RBP3.71□□□□□ -1.82
SYNE2-212ENST00000554584 SLC4A7Q9Y6M7 1214 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC144AA2RUR9 1427 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NUCB1Q02818 461 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 PODNQ7Z5L7 613 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 GSDMBQ8TAX9 411 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NAPAP54920 295 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 CEP135Q66GS9 1140 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NBPF3Q9H094 633 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NCAPH2Q6IBW4 605 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NCAPG2Q86XI2 1143 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 UBXN4Q92575 508 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NOL3O60936 208 aaKnown RBP3.71□□□□□ -1.82
SYNE2-212ENST00000554584 GDF11O95390 407 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 SPATA32Q96LK8 384 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 MYO1AQ9UBC5 1043 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 SUGT1Q9Y2Z0 365 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 DDHD2O94830 711 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 SERPIND1P05546 499 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 MRPS25P82663 173 aaKnown RBP3.71□□□□□ -1.82
SYNE2-212ENST00000554584 TMEM67Q5HYA8 995 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 ANGPTL8Q6UXH0 198 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NEK1Q96PY6 1258 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NUP62CLQ9H1M0 184 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 MDC1Q14676 2089 aaKnown RBP3.71□□□□□ -1.82
SYNE2-212ENST00000554584 SYCE3A1L190 88 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 RFX3P48380 749 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 IRX4P78413 519 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 CAVIN4Q5BKX8 364 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 CRACR2AQ9BSW2 395 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 SPTLC2O15270 562 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 RAPGEF1Q13905 1077 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 MAGEB6Q8N7X4 407 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 RFWD2Q8NHY2 731 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 PPARGC1AQ9UBK2 798 aaKnown RBP3.71□□□□□ -1.82
SYNE2-212ENST00000554584 USP16Q9Y5T5 823 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 ZNF131P52739 623 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 JDP2Q8WYK2 163 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 SUGCTQ9HAC7 445 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 USP21Q9UK80 565 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC78A2IDD5 438 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 PIK3R2O00459 728 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 PRKAG2Q9UGJ0 569 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 RSPH14Q9UHP6 348 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 GDAP1L1Q96MZ0 367 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NR1H4Q96RI1 486 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-212ENST00000554584 CROCCQ5TZA2 2017 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 ZEB2O60315 1214 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 TSPY3P0CV98 308 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 TSPY8P0CW00 308 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 TSPY1Q01534 308 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 DCAF4L1Q3SXM0 396 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 C17orf53Q8N3J3 647 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-212ENST00000554584 BHMTQ93088 406 aa3.71□□□□□ -1.82
SYNE2-212ENST00000554584 NCOA5Q9HCD5 579 aaKnown RBP3.71□□□□□ -1.82
SYNE2-212ENST00000554584 XAB2Q9HCS7 855 aaKnown RBP3.71□□□□□ -1.82
SYNE2-212ENST00000554584 THOC1Q96FV9 657 aaKnown RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 TACC3Q9Y6A5 838 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 TTC1Q99614 292 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 DMAP1Q9NPF5 467 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 ST7Q9NRC1 585 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 SCAMP3O14828 347 aaKnown RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 AKR1B10O60218 316 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 ATP6V1E1P36543 226 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 R3HDM1Q15032 1099 aaKnown RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 TBCCQ15814 346 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 C15orf59Q2T9L4 293 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 RTEL1Q9NZ71 1219 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 CNPY2Q9Y2B0 182 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 ANKRD1Q15327 319 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 BLOC1S2Q6QNY1 142 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 DDX41Q9UJV9 622 aaKnown RBP3.7□□□□□ -1.82
SYNE2-212ENST00000554584 TRPC6Q9Y210 931 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 SLC12A7Q9Y666 1083 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 ZBED9Q6R2W3 1325 aa3.7□□□□□ -1.82
SYNE2-212ENST00000554584 SPDYE3A6NKU9 549 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms