RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 NFKBIBQ15653 356 aa8.47□□□□□ -1.05
ATXN3-225ENST00000554214 CCDC27Q2M243 656 aa8.47□□□□□ -1.05
ATXN3-225ENST00000554214 WDR18Q9BV38 432 aa8.47□□□□□ -1.05
ATXN3-225ENST00000554214 RNF19AQ9NV58 838 aa8.47□□□□□ -1.05
ATXN3-225ENST00000554214 RNF112Q9ULX5 631 aa8.47□□□□□ -1.05
ATXN3-225ENST00000554214 ACTL7BQ9Y614 415 aa8.47□□□□□ -1.05
ATXN3-225ENST00000554214 SCO2A0A1W2PP80 73 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 ZNF862O60290 1169 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 FBXO24O75426 580 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 USP17L7P0C7H9 530 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 NME2P22392 152 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 EIF4BP23588 611 aaKnown RBP8.46□□□□□ -1.06
ATXN3-225ENST00000554214 ASPAP45381 313 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 PDZD3Q86UT5 571 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 NPAS4Q8IUM7 802 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 Q8N3U1 123 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 EMILIN2Q9BXX0 1053 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 CBX8Q9HC52 389 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 PPP1R9AQ9ULJ8 1098 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 PPM1HQ9ULR3 514 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 AP4E1Q9UPM8 1137 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 AK5Q9Y6K8 562 aa8.46□□□□□ -1.06
ATXN3-225ENST00000554214 PAOXQ6QHF9 649 aa8.45□□□□□ -1.06
ATXN3-225ENST00000554214 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
ATXN3-225ENST00000554214 YIPF2Q9BWQ6 316 aa8.45□□□□□ -1.06
ATXN3-225ENST00000554214 KRT82Q9NSB4 513 aa8.45□□□□□ -1.06
ATXN3-225ENST00000554214 SYNGAP1Q96PV0 1343 aa8.45□□□□□ -1.06
ATXN3-225ENST00000554214 ENC1O14682 589 aa8.44□□□□□ -1.06
ATXN3-225ENST00000554214 NFICP08651 508 aa8.44□□□□□ -1.06
ATXN3-225ENST00000554214 BMP6P22004 513 aa8.44□□□□□ -1.06
ATXN3-225ENST00000554214 MAP1SQ66K74 1059 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-225ENST00000554214 FAM105AQ9NUU6 356 aa8.44□□□□□ -1.06
ATXN3-225ENST00000554214 SAMM50Q9Y512 469 aa8.44□□□□□ -1.06
ATXN3-225ENST00000554214 PAGE1O75459 146 aa8.43□□□□□ -1.06
ATXN3-225ENST00000554214 RAB6AP20340 208 aa8.43□□□□□ -1.06
ATXN3-225ENST00000554214 HNRNPUQ00839 825 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATXN3-225ENST00000554214 KIF4BQ2VIQ3 1234 aa8.43□□□□□ -1.06
ATXN3-225ENST00000554214 ZDHHC13Q8IUH4 622 aa8.43□□□□□ -1.06
ATXN3-225ENST00000554214 GRIN3AQ8TCU5 1115 aa8.43□□□□□ -1.06
ATXN3-225ENST00000554214 ANKRD24Q8TF21 1146 aa8.43□□□□□ -1.06
ATXN3-225ENST00000554214 EZH1Q92800 747 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-225ENST00000554214 MFSD14AQ96MC6 490 aa8.43□□□□□ -1.06
ATXN3-225ENST00000554214 GSX1Q9H4S2 264 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-225ENST00000554214 PARP2Q9UGN5 583 aa8.43□□□□□ -1.06
ATXN3-225ENST00000554214 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-225ENST00000554214 WDR64B1ANS9 1081 aa8.42□□□□□ -1.06
ATXN3-225ENST00000554214 ID3Q02535 119 aa8.42□□□□□ -1.06
ATXN3-225ENST00000554214 ARTNQ5T4W7 220 aa8.42□□□□□ -1.06
ATXN3-225ENST00000554214 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
ATXN3-225ENST00000554214 FBXL6Q8N531 539 aa8.42□□□□□ -1.06
ATXN3-225ENST00000554214 SHKBP1Q8TBC3 707 aa8.42□□□□□ -1.06
ATXN3-225ENST00000554214 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
ATXN3-225ENST00000554214 TTF2Q9UNY4 1162 aaKnown RBP8.42□□□□□ -1.06
ATXN3-225ENST00000554214 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
ATXN3-225ENST00000554214 HYAL3O43820 417 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-225ENST00000554214 ERCC3P19447 782 aa8.41□□□□□ -1.06
ATXN3-225ENST00000554214 XPCQ01831 940 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-225ENST00000554214 ZNF252P-AS1Q0IIN9 211 aa8.41□□□□□ -1.06
ATXN3-225ENST00000554214 MAP7Q14244 749 aa8.41□□□□□ -1.06
ATXN3-225ENST00000554214 ACSS3Q9H6R3 686 aa8.41□□□□□ -1.06
ATXN3-225ENST00000554214 ZFP64Q9NPA5 681 aa8.41□□□□□ -1.06
ATXN3-225ENST00000554214 ZBTB7CA1YPR0 619 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 TGFB1P01137 390 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 SSTR4P31391 388 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 PSMD2Q13200 908 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 LRP8Q14114 963 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 LRRC14Q15048 493 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 FBXO33Q7Z6M2 555 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 HOMEZQ8IX15 550 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 SHISA5Q8N114 240 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 GPBAR1Q8TDU6 330 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 ACSBG1Q96GR2 724 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 SEMA6CQ9H3T2 930 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 LGR6Q9HBX8 967 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 DISC1Q9NRI5 854 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 ATG3Q9NT62 314 aa8.4□□□□□ -1.06
ATXN3-225ENST00000554214 PRR19A6NJB7 356 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 F13BP05160 661 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 CELA3AP09093 270 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 ADMP35318 185 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 DAB2P98082 770 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 TAGLNQ01995 201 aaKnown RBP8.39□□□□□ -1.07
ATXN3-225ENST00000554214 SV2BQ7L1I2 683 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 ATXN3LQ9H3M9 355 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 PIDD1Q9HB75 910 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 PRKAG2Q9UGJ0 569 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 CYP8B1Q9UNU6 501 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 PCDHGC5Q9Y5F6 944 aa8.39□□□□□ -1.07
ATXN3-225ENST00000554214 ZC3H12AQ5D1E8 599 aaKnown RBP8.38□□□□□ -1.07
ATXN3-225ENST00000554214 RASIP1Q5U651 963 aa8.38□□□□□ -1.07
ATXN3-225ENST00000554214 LLGL2Q6P1M3 1020 aa8.38□□□□□ -1.07
ATXN3-225ENST00000554214 FAM161BQ96MY7 647 aa8.38□□□□□ -1.07
ATXN3-225ENST00000554214 TBC1D32Q96NH3 1257 aa8.38□□□□□ -1.07
ATXN3-225ENST00000554214 DAGLAQ9Y4D2 1042 aa8.38□□□□□ -1.07
ATXN3-225ENST00000554214 RNGTTO60942 597 aaKnown RBP8.37□□□□□ -1.07
ATXN3-225ENST00000554214 COBLO75128 1261 aa8.37□□□□□ -1.07
ATXN3-225ENST00000554214 MED26O95402 600 aa8.37□□□□□ -1.07
ATXN3-225ENST00000554214 CCDC85BQ15834 202 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms