RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 WRNIP1Q96S55 665 aa15.79■□□□□ 0.12
LINC00643-202ENST00000553426 DAGLAQ9Y4D2 1042 aa15.79■□□□□ 0.12
LINC00643-202ENST00000553426 MYH13Q9UKX3 1938 aa15.78■□□□□ 0.12
LINC00643-202ENST00000553426 RPAP1Q9BWH6 1393 aaPredicted RBP15.78■□□□□ 0.12
LINC00643-202ENST00000553426 PRDX5P30044 214 aa15.78■□□□□ 0.12
LINC00643-202ENST00000553426 MTX1Q13505 466 aa15.78■□□□□ 0.12
LINC00643-202ENST00000553426 MVPQ14764 893 aaKnown RBP15.78■□□□□ 0.12
LINC00643-202ENST00000553426 ARHGEF6Q15052 776 aa15.78■□□□□ 0.12
LINC00643-202ENST00000553426 PRPF38BQ5VTL8 546 aaKnown RBP15.78■□□□□ 0.12
LINC00643-202ENST00000553426 SPTY2D1Q68D10 685 aaPredicted RBP15.78■□□□□ 0.12
LINC00643-202ENST00000553426 CCDC102BQ68D86 513 aa15.78■□□□□ 0.12
LINC00643-202ENST00000553426 FAM151AQ8WW52 585 aa15.78■□□□□ 0.12
LINC00643-202ENST00000553426 ZNF341Q9BYN7 854 aa15.78■□□□□ 0.12
LINC00643-202ENST00000553426 TRIM17Q9Y577 477 aa15.78■□□□□ 0.12
LINC00643-202ENST00000553426 SPDYE5A6NIY4 337 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 ZBTB22O15209 634 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 BCAR3O75815 825 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 CETPP11597 493 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 TIMM10P62072 90 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 HNRNPUQ00839 825 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC00643-202ENST00000553426 SP3Q02447 781 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 TCP10Q12799 353 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 G3BP1Q13283 466 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC00643-202ENST00000553426 GORABQ5T7V8 394 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 ZKSCAN2Q63HK3 967 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 CDC42EP5Q6NZY7 148 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 DZIP1Q86YF9 867 aaKnown RBP15.77■□□□□ 0.12
LINC00643-202ENST00000553426 CLUAP1Q96AJ1 413 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 MS4A4AQ96JQ5 239 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 NEUROD6Q96NK8 337 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 PTPN18Q99952 460 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 ZFYVE28Q9HCC9 887 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 USP40Q9NVE5 1235 aa15.77■□□□□ 0.12
LINC00643-202ENST00000553426 A0A1B0GUL7 405 aa15.76■□□□□ 0.11
LINC00643-202ENST00000553426 ADORA1P30542 326 aa15.76■□□□□ 0.11
LINC00643-202ENST00000553426 TFCP2Q12800 502 aa15.76■□□□□ 0.11
LINC00643-202ENST00000553426 SNAPC2Q13487 334 aa15.76■□□□□ 0.11
LINC00643-202ENST00000553426 TAF1CQ15572 869 aaPredicted RBP15.76■□□□□ 0.11
LINC00643-202ENST00000553426 MIGA2Q7L4E1 593 aa15.76■□□□□ 0.11
LINC00643-202ENST00000553426 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
LINC00643-202ENST00000553426 ZKSCAN4Q969J2 545 aaPredicted RBP15.76■□□□□ 0.11
LINC00643-202ENST00000553426 XAGE2Q96GT9 111 aa15.76■□□□□ 0.11
LINC00643-202ENST00000553426 ABCF2Q9UG63 623 aa15.76■□□□□ 0.11
LINC00643-202ENST00000553426 PDS5AQ29RF7 1337 aaKnown RBP15.75■□□□□ 0.11
LINC00643-202ENST00000553426 PPIL2Q13356 520 aa15.75■□□□□ 0.11
LINC00643-202ENST00000553426 OTOP1Q7RTM1 612 aa15.75■□□□□ 0.11
LINC00643-202ENST00000553426 BRI3BPQ8WY22 251 aa15.75■□□□□ 0.11
LINC00643-202ENST00000553426 EFCC1Q9HA90 598 aa15.75■□□□□ 0.11
LINC00643-202ENST00000553426 SNCAIPQ9Y6H5 919 aa15.75■□□□□ 0.11
LINC00643-202ENST00000553426 OTOFQ9HC10 1997 aa15.75■□□□□ 0.11
LINC00643-202ENST00000553426 PPATQ06203 517 aa15.74■□□□□ 0.11
LINC00643-202ENST00000553426 RASGRF1Q13972 1273 aa15.74■□□□□ 0.11
LINC00643-202ENST00000553426 ERICH6Q7L0X2 663 aa15.74■□□□□ 0.11
LINC00643-202ENST00000553426 FTSJ3Q8IY81 847 aaKnown RBP15.74■□□□□ 0.11
LINC00643-202ENST00000553426 CD99L2Q8TCZ2 262 aa15.74■□□□□ 0.11
LINC00643-202ENST00000553426 ZCCHC17Q9NP64 241 aaKnown RBP15.74■□□□□ 0.11
LINC00643-202ENST00000553426 LAMB1P07942 1786 aa15.74■□□□□ 0.11
LINC00643-202ENST00000553426 IRF6O14896 467 aa15.73■□□□□ 0.11
LINC00643-202ENST00000553426 NFIAQ12857 509 aa15.73■□□□□ 0.11
LINC00643-202ENST00000553426 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
LINC00643-202ENST00000553426 ENTPD3O75355 529 aa15.72■□□□□ 0.11
LINC00643-202ENST00000553426 GSTO1P78417 241 aa15.72■□□□□ 0.11
LINC00643-202ENST00000553426 OS9Q13438 667 aaPredicted RBP15.72■□□□□ 0.11
LINC00643-202ENST00000553426 KIF22Q14807 665 aa15.72■□□□□ 0.11
LINC00643-202ENST00000553426 ZSCAN29Q8IWY8 852 aaPredicted RBP15.72■□□□□ 0.11
LINC00643-202ENST00000553426 MIER1Q8N108 512 aa15.72■□□□□ 0.11
LINC00643-202ENST00000553426 FAM43AQ8N2R8 423 aa15.72■□□□□ 0.11
LINC00643-202ENST00000553426 TMEM57Q8N5G2 664 aa15.72■□□□□ 0.11
LINC00643-202ENST00000553426 FAM198AQ9UFP1 575 aa15.72■□□□□ 0.11
LINC00643-202ENST00000553426 PTPN22Q9Y2R2 807 aa15.72■□□□□ 0.11
LINC00643-202ENST00000553426 GAKO14976 1311 aa15.71■□□□□ 0.11
LINC00643-202ENST00000553426 AK9Q5TCS8 1911 aa15.71■□□□□ 0.11
LINC00643-202ENST00000553426 LDHCP07864 332 aa15.71■□□□□ 0.11
LINC00643-202ENST00000553426 INPP5BP32019 993 aa15.71■□□□□ 0.11
LINC00643-202ENST00000553426 RGS3P49796 1198 aa15.71■□□□□ 0.11
LINC00643-202ENST00000553426 FAM163AQ96GL9 167 aaPredicted RBP15.71■□□□□ 0.11
LINC00643-202ENST00000553426 IDI2Q9BXS1 227 aa15.71■□□□□ 0.11
LINC00643-202ENST00000553426 ZNF112Q9UJU3 913 aa15.71■□□□□ 0.11
LINC00643-202ENST00000553426 TNNQ9UQP3 1299 aa15.71■□□□□ 0.11
LINC00643-202ENST00000553426 PNMA6EA0A0J9YXQ4 647 aa15.7■□□□□ 0.1
LINC00643-202ENST00000553426 TLR2O60603 784 aa15.7■□□□□ 0.1
LINC00643-202ENST00000553426 UQCRFS1P1P0C7P4 283 aa15.7■□□□□ 0.1
LINC00643-202ENST00000553426 BTDP43251 543 aa15.7■□□□□ 0.1
LINC00643-202ENST00000553426 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.7■□□□□ 0.1
LINC00643-202ENST00000553426 SPATA5Q8NB90 893 aa15.7■□□□□ 0.1
LINC00643-202ENST00000553426 MKI67P46013 3256 aaKnown RBP15.7■□□□□ 0.1
LINC00643-202ENST00000553426 MROH7-TTC4A0A0A0MT08 1334 aa15.69■□□□□ 0.1
LINC00643-202ENST00000553426 BTBD19C9JJ37 291 aa15.69■□□□□ 0.1
LINC00643-202ENST00000553426 MECOMQ03112 1051 aa15.69■□□□□ 0.1
LINC00643-202ENST00000553426 NOL9Q5SY16 702 aaKnown RBP15.69■□□□□ 0.1
LINC00643-202ENST00000553426 ITPRIPQ8IWB1 547 aa15.69■□□□□ 0.1
LINC00643-202ENST00000553426 PICK1Q9NRD5 415 aa15.69■□□□□ 0.1
LINC00643-202ENST00000553426 RAI14Q9P0K7 980 aa15.69■□□□□ 0.1
LINC00643-202ENST00000553426 HMG20BQ9P0W2 317 aa15.69■□□□□ 0.1
LINC00643-202ENST00000553426 MAP4K4O95819 1239 aaPredicted RBP15.68■□□□□ 0.1
LINC00643-202ENST00000553426 ARID4AP29374 1257 aaPredicted RBP15.68■□□□□ 0.1
LINC00643-202ENST00000553426 PICALMQ13492 652 aa15.68■□□□□ 0.1
LINC00643-202ENST00000553426 CCDC158Q5M9N0 1113 aa15.68■□□□□ 0.1
LINC00643-202ENST00000553426 ANKRD23Q86SG2 305 aa15.68■□□□□ 0.1
LINC00643-202ENST00000553426 NBPF11Q86T75 865 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms