RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 CCDC69A6NI79 296 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 CCP110O43303 1012 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 KINO60870 393 aaKnown RBP8.52□□□□□ -1.05
BEST3-212ENST00000553096 ZNF513Q8N8E2 541 aaPredicted RBP8.52□□□□□ -1.05
BEST3-212ENST00000553096 KBTBD3Q8NAB2 608 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 CCDC150Q8NCX0 1101 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 BRF1Q92994 677 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 NEUROD6Q96NK8 337 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 TEX13AQ9BXU3 409 aaPredicted RBP8.52□□□□□ -1.05
BEST3-212ENST00000553096 RCOR1Q9UKL0 485 aa8.52□□□□□ -1.05
BEST3-212ENST00000553096 U3KPZ7 1027 aaPredicted RBP8.52□□□□□ -1.05
BEST3-212ENST00000553096 CDHR2Q9BYE9 1310 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 EXOC5O00471 708 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 STARD3NLO95772 234 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 TPM4P67936 248 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 SCARF1Q14162 830 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 BMS1Q14692 1282 aaKnown RBP8.51□□□□□ -1.05
BEST3-212ENST00000553096 STOX1Q6ZVD7 989 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 CCAR2Q8N163 923 aaKnown RBP8.51□□□□□ -1.05
BEST3-212ENST00000553096 MARCH10Q8NA82 808 aaPredicted RBP8.51□□□□□ -1.05
BEST3-212ENST00000553096 SYTL4Q96C24 671 aaPredicted RBP8.51□□□□□ -1.05
BEST3-212ENST00000553096 NEK1Q96PY6 1258 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 PAG1Q9NWQ8 432 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 ZNF215Q9UL58 517 aaPredicted RBP8.51□□□□□ -1.05
BEST3-212ENST00000553096 TAF1LQ8IZX4 1826 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 C4AP0C0L4 1744 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 C4BP0C0L5 1744 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 OSBPL5Q9H0X9 879 aaPredicted RBP8.51□□□□□ -1.05
BEST3-212ENST00000553096 GREM2Q9H772 168 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 SBF2Q86WG5 1849 aa8.51□□□□□ -1.05
BEST3-212ENST00000553096 PSDA5PKW4 1024 aaPredicted RBP8.5□□□□□ -1.05
BEST3-212ENST00000553096 FOXP2O15409 715 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 CAPN2P17655 700 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 CCZ1BP86790 482 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 CCZ1P86791 482 aaPredicted RBP8.5□□□□□ -1.05
BEST3-212ENST00000553096 FAM160A1Q05DH4 1040 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 KMT5BQ4FZB7 885 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 INTS5Q6P9B9 1019 aaKnown RBP8.5□□□□□ -1.05
BEST3-212ENST00000553096 CCAR1Q8IX12 1150 aaKnown RBP8.5□□□□□ -1.05
BEST3-212ENST00000553096 SMARCC2Q8TAQ2 1214 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 TRIM34Q9BYJ4 488 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 CALCOCO1Q9P1Z2 691 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 M0R2C6 588 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 CYP21A2P08686 494 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 ARID4AP29374 1257 aaPredicted RBP8.5□□□□□ -1.05
BEST3-212ENST00000553096 SATB1Q01826 763 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 STK3Q13188 491 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 ZRSR1Q15695 479 aaKnown RBP8.5□□□□□ -1.05
BEST3-212ENST00000553096 NBPF9Q3BBW0 867 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 MCMDC2Q4G0Z9 681 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 C11orf57Q6ZUT1 292 aaPredicted RBP8.5□□□□□ -1.05
BEST3-212ENST00000553096 VGLL2Q8N8G2 317 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 TTLL11Q8NHH1 800 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 ACSBG1Q96GR2 724 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 BPIFA3Q9BQP9 254 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 MAST3O60307 1309 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 COL24A1Q17RW2 1714 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 ITPK1Q13572 414 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 SNW1Q13573 536 aaKnown RBP8.5□□□□□ -1.05
BEST3-212ENST00000553096 ZMYM1Q5SVZ6 1142 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 PI16Q6UXB8 463 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 OTUD6BQ8N6M0 293 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 XAGE2Q96GT9 111 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 L2HGDHQ9H9P8 463 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 TBC1D2BQ9UPU7 963 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 RIPOR2Q9Y4F9 1068 aa8.5□□□□□ -1.05
BEST3-212ENST00000553096 PFKFB2O60825 505 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 CTSWP56202 376 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 CCDC57Q2TAC2 916 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 DHX40Q8IX18 779 aaKnown RBP8.49□□□□□ -1.05
BEST3-212ENST00000553096 ZNF34Q8IZ26 560 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 ARGLU1Q9NWB6 273 aaPredicted RBP8.49□□□□□ -1.05
BEST3-212ENST00000553096 THSD7AQ9UPZ6 1657 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 MYH13Q9UKX3 1938 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 ONECUT3O60422 494 aaPredicted RBP8.49□□□□□ -1.05
BEST3-212ENST00000553096 TPM1P09493 284 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 ITGA6P23229 1130 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 ELF2Q15723 593 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 CCDC96Q2M329 555 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 FBXO38Q6PIJ6 1188 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 KRT27Q7Z3Y8 459 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 FILIP1Q7Z7B0 1213 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 UPF1Q92900 1129 aaKnown RBP eCLIP8.49□□□□□ -1.05
BEST3-212ENST00000553096 TIGD1Q96MW7 591 aa8.49□□□□□ -1.05
BEST3-212ENST00000553096 SRRTQ9BXP5 876 aaKnown RBP8.49□□□□□ -1.05
BEST3-212ENST00000553096 NHSQ6T4R5 1651 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 JAK2O60674 1132 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 IFIT1P09914 478 aaKnown RBP8.48□□□□□ -1.05
BEST3-212ENST00000553096 IL6STP40189 918 aaPredicted RBP8.48□□□□□ -1.05
BEST3-212ENST00000553096 Q6ZUG5 572 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 DZIP3Q86Y13 1208 aaKnown RBP8.48□□□□□ -1.05
BEST3-212ENST00000553096 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.48□□□□□ -1.05
BEST3-212ENST00000553096 LY75O60449 1722 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 A0A1W2PQ27 194 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 A0A1W2PQ64 194 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 A0A1W2PQD8 194 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 USP27XA6NNY8 438 aa8.48□□□□□ -1.05
BEST3-212ENST00000553096 H2AFXP16104 143 aaPredicted RBP8.48□□□□□ -1.05
BEST3-212ENST00000553096 EIF5P55010 431 aaKnown RBP8.48□□□□□ -1.05
BEST3-212ENST00000553096 NAA30Q147X3 362 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms