RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 TTF2Q9UNY4 1162 aaKnown RBP9.38□□□□□ -0.91
NPAS3-213ENST00000552874 CNTNAP1P78357 1384 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 ATRNL1Q5VV63 1379 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 RPAP1Q9BWH6 1393 aaPredicted RBP9.37□□□□□ -0.91
NPAS3-213ENST00000552874 MAST3O60307 1309 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 PITPNM2Q9BZ72 1349 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 F8W031 263 aaPredicted RBP9.37□□□□□ -0.91
NPAS3-213ENST00000552874 IGSF3O75054 1194 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 NEFLP07196 543 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 GSPT1P15170 499 aaKnown RBP9.37□□□□□ -0.91
NPAS3-213ENST00000552874 LMOD1P29536 600 aaPredicted RBP9.37□□□□□ -0.91
NPAS3-213ENST00000552874 CLCN6P51797 869 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 RHBDL3P58872 404 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 CFAP100Q494V2 611 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 GORABQ5T7V8 394 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 LDHDQ86WU2 507 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 FAM163AQ96GL9 167 aaPredicted RBP9.37□□□□□ -0.91
NPAS3-213ENST00000552874 BOLA2Q9H3K6 86 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 PAG1Q9NWQ8 432 aa9.37□□□□□ -0.91
NPAS3-213ENST00000552874 PARP14Q460N5 1801 aa9.36□□□□□ -0.91
NPAS3-213ENST00000552874 GOLIM4O00461 696 aa9.36□□□□□ -0.91
NPAS3-213ENST00000552874 GLRX3O76003 335 aaKnown RBP9.36□□□□□ -0.91
NPAS3-213ENST00000552874 LDHBP07195 334 aaKnown RBP9.36□□□□□ -0.91
NPAS3-213ENST00000552874 SLFNL1Q499Z3 407 aa9.36□□□□□ -0.91
NPAS3-213ENST00000552874 ZGPATQ8N5A5 531 aaKnown RBP9.36□□□□□ -0.91
NPAS3-213ENST00000552874 RBM46Q8TBY0 533 aaKnown RBP9.36□□□□□ -0.91
NPAS3-213ENST00000552874 ZC3H15Q8WU90 426 aaKnown RBP9.36□□□□□ -0.91
NPAS3-213ENST00000552874 PRMT6Q96LA8 375 aaPredicted RBP9.36□□□□□ -0.91
NPAS3-213ENST00000552874 PPP4R2Q9NY27 417 aa9.36□□□□□ -0.91
NPAS3-213ENST00000552874 GGA3Q9NZ52 723 aa9.36□□□□□ -0.91
NPAS3-213ENST00000552874 LOC285556D6RIA3 1793 aa9.35□□□□□ -0.91
NPAS3-213ENST00000552874 GPR75-ASB3A0A0A6YYF3 556 aa9.35□□□□□ -0.91
NPAS3-213ENST00000552874 H7C1D1 291 aa9.35□□□□□ -0.91
NPAS3-213ENST00000552874 FRAT2O75474 233 aaPredicted RBP9.35□□□□□ -0.91
NPAS3-213ENST00000552874 ITGBL1O95965 494 aaPredicted RBP9.35□□□□□ -0.91
NPAS3-213ENST00000552874 PDE6AP16499 860 aa9.35□□□□□ -0.91
NPAS3-213ENST00000552874 ADD2P35612 726 aa9.35□□□□□ -0.91
NPAS3-213ENST00000552874 ERICH6Q7L0X2 663 aa9.35□□□□□ -0.91
NPAS3-213ENST00000552874 PNMA8AQ86V59 439 aaPredicted RBP9.35□□□□□ -0.91
NPAS3-213ENST00000552874 KBTBD3Q8NAB2 608 aa9.35□□□□□ -0.91
NPAS3-213ENST00000552874 TEKT1Q969V4 418 aa9.35□□□□□ -0.91
NPAS3-213ENST00000552874 DNAJC2Q99543 621 aaKnown RBP9.35□□□□□ -0.91
NPAS3-213ENST00000552874 RIOK1Q9BRS2 568 aaKnown RBP9.35□□□□□ -0.91
NPAS3-213ENST00000552874 ABCF2Q9UG63 623 aa9.35□□□□□ -0.91
NPAS3-213ENST00000552874 MYH4Q9Y623 1939 aa9.35□□□□□ -0.91
NPAS3-213ENST00000552874 ADM5C9JUS6 153 aa9.34□□□□□ -0.91
NPAS3-213ENST00000552874 WDHD1O75717 1129 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-213ENST00000552874 TOMM70O94826 608 aa9.34□□□□□ -0.91
NPAS3-213ENST00000552874 TTC22Q5TAA0 569 aa9.34□□□□□ -0.91
NPAS3-213ENST00000552874 SPTY2D1Q68D10 685 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-213ENST00000552874 CDC42EP5Q6NZY7 148 aa9.34□□□□□ -0.91
NPAS3-213ENST00000552874 TMED8Q6PL24 325 aaPredicted RBP9.34□□□□□ -0.91
NPAS3-213ENST00000552874 DLK2Q6UY11 383 aa9.34□□□□□ -0.91
NPAS3-213ENST00000552874 CDAN1Q8IWY9 1227 aa9.34□□□□□ -0.91
NPAS3-213ENST00000552874 GPATCH3Q96I76 525 aa9.34□□□□□ -0.91
NPAS3-213ENST00000552874 TEPSINQ96N21 525 aa9.34□□□□□ -0.91
NPAS3-213ENST00000552874 RTN4Q9NQC3 1192 aaKnown RBP9.34□□□□□ -0.91
NPAS3-213ENST00000552874 DDX4Q9NQI0 724 aaKnown RBP9.34□□□□□ -0.91
NPAS3-213ENST00000552874 HDAC9Q9UKV0 1011 aa9.34□□□□□ -0.91
NPAS3-213ENST00000552874 ERC2O15083 957 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 FOXP2O15409 715 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 MAP4K4O95819 1239 aaPredicted RBP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 BTDP43251 543 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 PPP4CP60510 307 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 FMR1Q06787 632 aaKnown RBP eCLIP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 NFIAQ12857 509 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 TTF1Q15361 905 aaPredicted RBP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 DLGAP5Q15398 846 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 EAPPQ56P03 285 aaPredicted RBP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 ANGEL2Q5VTE6 544 aaKnown RBP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 FKBP1CQ5VVH2 108 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 MAP1SQ66K74 1059 aaPredicted RBP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 DZIP1Q86YF9 867 aaKnown RBP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 OGFOD1Q8N543 542 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 CCDC136Q96JN2 1154 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 IDI2Q9BXS1 227 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 GLIS2Q9BZE0 524 aaPredicted RBP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 TDRD3Q9H7E2 651 aaKnown RBP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 ZNF70Q9UC06 446 aaPredicted RBP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
NPAS3-213ENST00000552874 MKRN1Q9UHC7 482 aaKnown RBP9.33□□□□□ -0.92
NPAS3-213ENST00000552874 ZNF532Q9HCE3 1301 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 CLRN2A0PK11 232 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 IDH1O75874 414 aaKnown RBP9.32□□□□□ -0.92
NPAS3-213ENST00000552874 CACNB3P54284 484 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 DYNLL1P63167 89 aaKnown RBP9.32□□□□□ -0.92
NPAS3-213ENST00000552874 FSTL1Q12841 308 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 UBE3CQ15386 1083 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 NAA16Q6N069 864 aaPredicted RBP9.32□□□□□ -0.92
NPAS3-213ENST00000552874 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 APOBEC3FQ8IUX4 373 aaKnown RBP9.32□□□□□ -0.92
NPAS3-213ENST00000552874 MAGEB6Q8N7X4 407 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 SMC1BQ8NDV3 1235 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 BCL11AQ9H165 835 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 IL25Q9H293 177 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 RAI14Q9P0K7 980 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 LRP2BPQ9P2M1 347 aa9.32□□□□□ -0.92
NPAS3-213ENST00000552874 SCAF8Q9UPN6 1271 aaKnown RBP9.32□□□□□ -0.92
NPAS3-213ENST00000552874 TRAF5O00463 557 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms