RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 CRHR2Q13324 411 aa17.15■□□□□ 0.34
SMARCC2-212ENST00000552566 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
SMARCC2-212ENST00000552566 OTUD5Q96G74 571 aa17.15■□□□□ 0.34
SMARCC2-212ENST00000552566 CCDC136Q96JN2 1154 aa17.15■□□□□ 0.34
SMARCC2-212ENST00000552566 PTPN18Q99952 460 aa17.15■□□□□ 0.34
SMARCC2-212ENST00000552566 MRIQ9BWK5 157 aa17.15■□□□□ 0.34
SMARCC2-212ENST00000552566 GNL3LQ9NVN8 582 aaKnown RBP17.15■□□□□ 0.34
SMARCC2-212ENST00000552566 CIAO1O76071 339 aa17.14■□□□□ 0.33
SMARCC2-212ENST00000552566 HHIPL2Q6UWX4 724 aa17.14■□□□□ 0.33
SMARCC2-212ENST00000552566 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMARCC2-212ENST00000552566 RWDD1Q9H446 243 aaPredicted RBP17.14■□□□□ 0.33
SMARCC2-212ENST00000552566 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
SMARCC2-212ENST00000552566 CCL15-CCL14A0A0B4J2E2 113 aa17.13■□□□□ 0.33
SMARCC2-212ENST00000552566 IL15P40933 162 aaPredicted RBP17.13■□□□□ 0.33
SMARCC2-212ENST00000552566 GTF2A2P52657 109 aa17.13■□□□□ 0.33
SMARCC2-212ENST00000552566 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
SMARCC2-212ENST00000552566 CCL15Q16663 113 aa17.13■□□□□ 0.33
SMARCC2-212ENST00000552566 MS4A4AQ96JQ5 239 aa17.13■□□□□ 0.33
SMARCC2-212ENST00000552566 WRNIP1Q96S55 665 aa17.13■□□□□ 0.33
SMARCC2-212ENST00000552566 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
SMARCC2-212ENST00000552566 TESPA1A2RU30 521 aaPredicted RBP17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 PRDX5P30044 214 aa17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 MIGA2Q7L4E1 593 aa17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 OTOP1Q7RTM1 612 aa17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 FAM83AQ86UY5 434 aa17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 CD99L2Q8TCZ2 262 aa17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 BRI3BPQ8WY22 251 aa17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 ZKSCAN4Q969J2 545 aaPredicted RBP17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 HOOK2Q96ED9 719 aa17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 ERO1AQ96HE7 468 aa17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 A0A1B0GUL6 1792 aa17.12■□□□□ 0.33
SMARCC2-212ENST00000552566 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
SMARCC2-212ENST00000552566 PHKA1P46020 1223 aa17.11■□□□□ 0.33
SMARCC2-212ENST00000552566 TCP10Q12799 353 aa17.11■□□□□ 0.33
SMARCC2-212ENST00000552566 FKBP1CQ5VVH2 108 aa17.11■□□□□ 0.33
SMARCC2-212ENST00000552566 DAGLAQ9Y4D2 1042 aa17.11■□□□□ 0.33
SMARCC2-212ENST00000552566 ADORA1P30542 326 aa17.1■□□□□ 0.33
SMARCC2-212ENST00000552566 ATP8B2P98198 1209 aa17.1■□□□□ 0.33
SMARCC2-212ENST00000552566 SP3Q02447 781 aa17.1■□□□□ 0.33
SMARCC2-212ENST00000552566 TAF1CQ15572 869 aaPredicted RBP17.1■□□□□ 0.33
SMARCC2-212ENST00000552566 DCAF15Q66K64 600 aa17.1■□□□□ 0.33
SMARCC2-212ENST00000552566 CDC42EP5Q6NZY7 148 aa17.1■□□□□ 0.33
SMARCC2-212ENST00000552566 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
SMARCC2-212ENST00000552566 DENND2AQ9ULE3 1009 aa17.1■□□□□ 0.33
SMARCC2-212ENST00000552566 SNCAIPQ9Y6H5 919 aa17.1■□□□□ 0.33
SMARCC2-212ENST00000552566 SPDYE5A6NIY4 337 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 SRGAP3O43295 1099 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 TIMM10P62072 90 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 CEP85Q6P2H3 762 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 ERO1BQ86YB8 467 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 FAM43AQ8N2R8 423 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 ZNF341Q9BYN7 854 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 EFCC1Q9HA90 598 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 ZFYVE28Q9HCC9 887 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 COPRSQ9NQ92 184 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 PCDHB15Q9Y5E8 787 aa17.09■□□□□ 0.33
SMARCC2-212ENST00000552566 AKAP11Q9UKA4 1901 aa17.08■□□□□ 0.33
SMARCC2-212ENST00000552566 SEMA3EO15041 775 aa17.08■□□□□ 0.32
SMARCC2-212ENST00000552566 CETPP11597 493 aa17.08■□□□□ 0.32
SMARCC2-212ENST00000552566 NFIAQ12857 509 aa17.08■□□□□ 0.32
SMARCC2-212ENST00000552566 CCDC102BQ68D86 513 aa17.08■□□□□ 0.32
SMARCC2-212ENST00000552566 FAM151AQ8WW52 585 aa17.08■□□□□ 0.32
SMARCC2-212ENST00000552566 IRF6O14896 467 aa17.07■□□□□ 0.32
SMARCC2-212ENST00000552566 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
SMARCC2-212ENST00000552566 INPP5BP32019 993 aa17.07■□□□□ 0.32
SMARCC2-212ENST00000552566 TFCP2Q12800 502 aa17.07■□□□□ 0.32
SMARCC2-212ENST00000552566 SNAPC2Q13487 334 aa17.07■□□□□ 0.32
SMARCC2-212ENST00000552566 ZBTB47Q9UFB7 747 aaPredicted RBP17.07■□□□□ 0.32
SMARCC2-212ENST00000552566 ABCF2Q9UG63 623 aa17.07■□□□□ 0.32
SMARCC2-212ENST00000552566 PTPN22Q9Y2R2 807 aa17.07■□□□□ 0.32
SMARCC2-212ENST00000552566 MTX1Q13505 466 aa17.06■□□□□ 0.32
SMARCC2-212ENST00000552566 HDAC1Q13547 482 aaPredicted RBP17.06■□□□□ 0.32
SMARCC2-212ENST00000552566 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
SMARCC2-212ENST00000552566 NEUROD6Q96NK8 337 aa17.06■□□□□ 0.32
SMARCC2-212ENST00000552566 AKAP2Q9Y2D5 859 aa17.06■□□□□ 0.32
SMARCC2-212ENST00000552566 SALL1Q9NSC2 1324 aa17.05■□□□□ 0.32
SMARCC2-212ENST00000552566 A0A1B0GUL7 405 aa17.05■□□□□ 0.32
SMARCC2-212ENST00000552566 BTBD19C9JJ37 291 aa17.05■□□□□ 0.32
SMARCC2-212ENST00000552566 PPIL2Q13356 520 aa17.05■□□□□ 0.32
SMARCC2-212ENST00000552566 RASGRF1Q13972 1273 aa17.05■□□□□ 0.32
SMARCC2-212ENST00000552566 B4GALNT3Q6L9W6 998 aa17.05■□□□□ 0.32
SMARCC2-212ENST00000552566 ZFPM1Q8IX07 1006 aa17.05■□□□□ 0.32
SMARCC2-212ENST00000552566 ZGPATQ8N5A5 531 aaKnown RBP17.05■□□□□ 0.32
SMARCC2-212ENST00000552566 FAM198AQ9UFP1 575 aa17.05■□□□□ 0.32
SMARCC2-212ENST00000552566 RPAP1Q9BWH6 1393 aaPredicted RBP17.04■□□□□ 0.32
SMARCC2-212ENST00000552566 ECM2O94769 699 aaPredicted RBP17.04■□□□□ 0.32
SMARCC2-212ENST00000552566 CAP1Q01518 475 aa17.04■□□□□ 0.32
SMARCC2-212ENST00000552566 OS9Q13438 667 aaPredicted RBP17.04■□□□□ 0.32
SMARCC2-212ENST00000552566 ARHGEF6Q15052 776 aa17.04■□□□□ 0.32
SMARCC2-212ENST00000552566 HSP90AB4PQ58FF6 505 aa17.04■□□□□ 0.32
SMARCC2-212ENST00000552566 GORABQ5T7V8 394 aa17.04■□□□□ 0.32
SMARCC2-212ENST00000552566 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
SMARCC2-212ENST00000552566 XAGE2Q96GT9 111 aa17.04■□□□□ 0.32
SMARCC2-212ENST00000552566 PNMA6EA0A0J9YXQ4 647 aa17.03■□□□□ 0.32
SMARCC2-212ENST00000552566 RGS3P49796 1198 aa17.03■□□□□ 0.32
SMARCC2-212ENST00000552566 PPATQ06203 517 aa17.03■□□□□ 0.32
SMARCC2-212ENST00000552566 G3BP1Q13283 466 aaKnown RBP eCLIP17.03■□□□□ 0.32
SMARCC2-212ENST00000552566 CENPQQ7L2Z9 268 aaPredicted RBP17.03■□□□□ 0.32
SMARCC2-212ENST00000552566 ZSCAN29Q8IWY8 852 aaPredicted RBP17.03■□□□□ 0.32
SMARCC2-212ENST00000552566 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms