RNA–Protein interactions for RNA: ENST00000552495.1

RITA1-203, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

TSL 2 BASIC

Gene RITA1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-203ENST00000552495 RIOK1Q9BRS2 568 aaKnown RBP27.39■■□□□ 1.98
RITA1-203ENST00000552495 SH2B2O14492 632 aaPredicted RBP27.38■■□□□ 1.97
RITA1-203ENST00000552495 IGSF3O75054 1194 aa27.38■■□□□ 1.97
RITA1-203ENST00000552495 STAG1Q8WVM7 1258 aa27.38■■□□□ 1.97
RITA1-203ENST00000552495 RNF41Q9H4P4 317 aaPredicted RBP27.38■■□□□ 1.97
RITA1-203ENST00000552495 CTDSPL2Q05D32 466 aa27.38■■□□□ 1.97
RITA1-203ENST00000552495 SCAND2PQ9GZW5 306 aaPredicted RBP27.38■■□□□ 1.97
RITA1-203ENST00000552495 HPS5Q9UPZ3 1129 aa27.38■■□□□ 1.97
RITA1-203ENST00000552495 NSUN4Q96CB9 384 aaKnown RBP27.37■■□□□ 1.97
RITA1-203ENST00000552495 CHD4Q14839 1912 aa27.37■■□□□ 1.97
RITA1-203ENST00000552495 SPTY2D1Q68D10 685 aaPredicted RBP27.36■■□□□ 1.97
RITA1-203ENST00000552495 ELP1O95163 1332 aa27.36■■□□□ 1.97
RITA1-203ENST00000552495 POLRMTO00411 1230 aaKnown RBP27.36■■□□□ 1.97
RITA1-203ENST00000552495 CPLX1O14810 134 aa27.36■■□□□ 1.97
RITA1-203ENST00000552495 CHAF1AQ13111 956 aaPredicted RBP27.36■■□□□ 1.97
RITA1-203ENST00000552495 RESTQ13127 1097 aa27.36■■□□□ 1.97
RITA1-203ENST00000552495 TXNRD3Q86VQ6 643 aa27.36■■□□□ 1.97
RITA1-203ENST00000552495 MECOMQ03112 1051 aa27.35■■□□□ 1.97
RITA1-203ENST00000552495 DDR1Q08345 913 aa27.35■■□□□ 1.97
RITA1-203ENST00000552495 C15orf52Q6ZUT6 534 aaKnown RBP27.35■■□□□ 1.97
RITA1-203ENST00000552495 IGDCC4Q8TDY8 1250 aa27.35■■□□□ 1.97
RITA1-203ENST00000552495 BRIP1Q9BX63 1249 aa27.35■■□□□ 1.97
RITA1-203ENST00000552495 ZSWIM5Q9P217 1185 aa27.35■■□□□ 1.97
RITA1-203ENST00000552495 BBOX1O75936 387 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 LIFRP42702 1097 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 PPARAQ07869 468 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 SGMS1Q86VZ5 419 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 SDR42E1Q8WUS8 393 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 MTA3Q9BTC8 594 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 ANAPC4Q9UJX5 808 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 KDM4AO75164 1064 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 TMEM67Q5HYA8 995 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 GIMAP6Q6P9H5 292 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 LRSAM1Q6UWE0 723 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 ZNF804AQ7Z570 1209 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 ZNF384Q8TF68 577 aa27.34■■□□□ 1.97
RITA1-203ENST00000552495 APBA3O96018 575 aa27.33■■□□□ 1.97
RITA1-203ENST00000552495 HOXA10P31260 410 aaPredicted RBP27.33■■□□□ 1.97
RITA1-203ENST00000552495 SART3Q15020 963 aaKnown RBP27.33■■□□□ 1.97
RITA1-203ENST00000552495 WDR66Q8TBY9 1149 aa27.33■■□□□ 1.97
RITA1-203ENST00000552495 SYCE3A1L190 88 aa27.32■■□□□ 1.96
RITA1-203ENST00000552495 METAP2P50579 478 aaKnown RBP eCLIP27.32■■□□□ 1.96
RITA1-203ENST00000552495 DYNLL1P63167 89 aaKnown RBP27.32■■□□□ 1.96
RITA1-203ENST00000552495 FAM173BQ6P4H8 233 aa27.32■■□□□ 1.96
RITA1-203ENST00000552495 NKX2-3Q8TAU0 364 aa27.32■■□□□ 1.96
RITA1-203ENST00000552495 LY9Q9HBG7 655 aa27.32■■□□□ 1.96
RITA1-203ENST00000552495 INCENPQ9NQS7 918 aa27.32■■□□□ 1.96
RITA1-203ENST00000552495 IFIT3O14879 490 aaKnown RBP27.32■■□□□ 1.96
RITA1-203ENST00000552495 FDPSP14324 419 aaKnown RBP27.32■■□□□ 1.96
RITA1-203ENST00000552495 ATP2B4P23634 1241 aa27.32■■□□□ 1.96
RITA1-203ENST00000552495 NFXL1Q6ZNB6 911 aa27.32■■□□□ 1.96
RITA1-203ENST00000552495 NLGN1Q8N2Q7 840 aa27.32■■□□□ 1.96
RITA1-203ENST00000552495 CRAMP1Q96RY5 1269 aa27.32■■□□□ 1.96
RITA1-203ENST00000552495 TOMM22Q9NS69 142 aa27.32■■□□□ 1.96
RITA1-203ENST00000552495 MAST2Q6P0Q8 1798 aa27.31■■□□□ 1.96
RITA1-203ENST00000552495 KLRG2A4D1S0 409 aaPredicted RBP27.31■■□□□ 1.96
RITA1-203ENST00000552495 CDKL5O76039 1030 aa27.31■■□□□ 1.96
RITA1-203ENST00000552495 CPLX2Q6PUV4 134 aaKnown RBP27.31■■□□□ 1.96
RITA1-203ENST00000552495 APOA5Q6Q788 366 aa27.31■■□□□ 1.96
RITA1-203ENST00000552495 TTC6Q86TZ1 520 aa27.31■■□□□ 1.96
RITA1-203ENST00000552495 TDRD7Q8NHU6 1098 aaKnown RBP27.31■■□□□ 1.96
RITA1-203ENST00000552495 CFAP45Q9UL16 551 aa27.31■■□□□ 1.96
RITA1-203ENST00000552495 MINDY4BA8MYZ0 360 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 PRDX5P30044 214 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 GPSM2P81274 684 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 CCDC183Q5T5S1 534 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 FLAD1Q8NFF5 587 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 AKT1S1Q96B36 256 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 SPATA32Q96LK8 384 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 TACC3Q9Y6A5 838 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 ZBTB43O43298 467 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 LETM1O95202 739 aaPredicted RBP27.3■■□□□ 1.96
RITA1-203ENST00000552495 RRP12Q5JTH9 1297 aaKnown RBP27.3■■□□□ 1.96
RITA1-203ENST00000552495 TMC4Q7Z404 712 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 RGS22Q8NE09 1264 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 PANK2Q9BZ23 570 aa27.3■■□□□ 1.96
RITA1-203ENST00000552495 CRNKL1Q9BZJ0 848 aaKnown RBP27.3■■□□□ 1.96
RITA1-203ENST00000552495 ORC3Q9UBD5 711 aaPredicted RBP27.3■■□□□ 1.96
RITA1-203ENST00000552495 CCDC88AQ3V6T2 1871 aa27.29■■□□□ 1.96
RITA1-203ENST00000552495 ERICH2A1L162 156 aa27.29■■□□□ 1.96
RITA1-203ENST00000552495 RXRBP28702 533 aa27.29■■□□□ 1.96
RITA1-203ENST00000552495 ZNF827Q17R98 1081 aa27.29■■□□□ 1.96
RITA1-203ENST00000552495 DZIP1Q86YF9 867 aaKnown RBP27.29■■□□□ 1.96
RITA1-203ENST00000552495 TMTC2Q8N394 836 aa27.29■■□□□ 1.96
RITA1-203ENST00000552495 GGA1Q9UJY5 639 aa27.29■■□□□ 1.96
RITA1-203ENST00000552495 SLC12A7Q9Y666 1083 aa27.29■■□□□ 1.96
RITA1-203ENST00000552495 CCDC69A6NI79 296 aa27.28■■□□□ 1.96
RITA1-203ENST00000552495 PCP11498 1178 aaKnown RBP27.28■■□□□ 1.96
RITA1-203ENST00000552495 ATL3Q6DD88 541 aa27.28■■□□□ 1.96
RITA1-203ENST00000552495 SYNE3Q6ZMZ3 975 aa27.28■■□□□ 1.96
RITA1-203ENST00000552495 RAB11FIP4Q86YS3 637 aa27.28■■□□□ 1.96
RITA1-203ENST00000552495 LEO1Q8WVC0 666 aaPredicted RBP27.27■■□□□ 1.96
RITA1-203ENST00000552495 ESR2Q92731 530 aa27.27■■□□□ 1.96
RITA1-203ENST00000552495 PODXL2Q9NZ53 605 aa27.27■■□□□ 1.96
RITA1-203ENST00000552495 TFIP11Q9UBB9 837 aaKnown RBP27.27■■□□□ 1.96
RITA1-203ENST00000552495 UFL1O94874 794 aa27.27■■□□□ 1.96
RITA1-203ENST00000552495 FOSBP53539 338 aa27.27■■□□□ 1.96
RITA1-203ENST00000552495 KLHL34Q8N239 644 aa27.27■■□□□ 1.96
RITA1-203ENST00000552495 C8orf76Q96K31 380 aa27.27■■□□□ 1.96
RITA1-203ENST00000552495 ATP8A2Q9NTI2 1148 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms