RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 ECEL1O95672 775 aa7.51□□□□□ -1.21
USP44-207ENST00000552237 MTMR3Q13615 1198 aa7.51□□□□□ -1.21
USP44-207ENST00000552237 WFDC3Q8IUB2 231 aa7.51□□□□□ -1.21
USP44-207ENST00000552237 CCNJLQ8IV13 435 aa7.51□□□□□ -1.21
USP44-207ENST00000552237 MBNL3Q9NUK0 354 aaKnown RBP7.51□□□□□ -1.21
USP44-207ENST00000552237 FAM13AO94988 1023 aa7.5□□□□□ -1.21
USP44-207ENST00000552237 GRIA4P48058 902 aa7.5□□□□□ -1.21
USP44-207ENST00000552237 CDK5R2Q13319 367 aa7.5□□□□□ -1.21
USP44-207ENST00000552237 SPRED3Q2MJR0 410 aa7.5□□□□□ -1.21
USP44-207ENST00000552237 LRRN4CLQ8ND94 238 aa7.5□□□□□ -1.21
USP44-207ENST00000552237 GSX1Q9H4S2 264 aaPredicted RBP7.5□□□□□ -1.21
USP44-207ENST00000552237 VAV3Q9UKW4 847 aa7.5□□□□□ -1.21
USP44-207ENST00000552237 PRKCQQ04759 706 aa7.49□□□□□ -1.21
USP44-207ENST00000552237 TRIM56Q9BRZ2 755 aaKnown RBP7.49□□□□□ -1.21
USP44-207ENST00000552237 WDR18Q9BV38 432 aa7.49□□□□□ -1.21
USP44-207ENST00000552237 ADAMTS6Q9UKP5 1117 aa7.49□□□□□ -1.21
USP44-207ENST00000552237 A0A1W2PP55 124 aa7.48□□□□□ -1.21
USP44-207ENST00000552237 LRRC10BA6NIK2 292 aa7.48□□□□□ -1.21
USP44-207ENST00000552237 B3GALT4O96024 378 aa7.48□□□□□ -1.21
USP44-207ENST00000552237 CD96P40200 585 aa7.48□□□□□ -1.21
USP44-207ENST00000552237 HNRNPUQ00839 825 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP44-207ENST00000552237 IFI16Q16666 785 aaKnown RBP7.48□□□□□ -1.21
USP44-207ENST00000552237 FAM84AQ96KN4 292 aa7.48□□□□□ -1.21
USP44-207ENST00000552237 HRASLS5Q96KN8 279 aa7.48□□□□□ -1.21
USP44-207ENST00000552237 GTF3C3Q9Y5Q9 886 aa7.48□□□□□ -1.21
USP44-207ENST00000552237 AP3B2Q13367 1082 aa7.47□□□□□ -1.21
USP44-207ENST00000552237 AOC3Q16853 763 aa7.47□□□□□ -1.21
USP44-207ENST00000552237 KRTAP19-4Q3LI73 84 aa7.47□□□□□ -1.21
USP44-207ENST00000552237 ANGEL2Q5VTE6 544 aaKnown RBP7.47□□□□□ -1.21
USP44-207ENST00000552237 TCF12Q99081 682 aa7.47□□□□□ -1.21
USP44-207ENST00000552237 ATXN3LQ9H3M9 355 aa7.47□□□□□ -1.21
USP44-207ENST00000552237 PPP1R9AQ9ULJ8 1098 aa7.47□□□□□ -1.21
USP44-207ENST00000552237 MTMR7Q9Y216 660 aa7.47□□□□□ -1.21
USP44-207ENST00000552237 GJD3Q8N144 294 aa7.46□□□□□ -1.22
USP44-207ENST00000552237 RNGTTO60942 597 aaKnown RBP7.45□□□□□ -1.22
USP44-207ENST00000552237 CEACAM5P06731 702 aa7.45□□□□□ -1.22
USP44-207ENST00000552237 SLFN14P0C7P3 912 aa7.45□□□□□ -1.22
USP44-207ENST00000552237 ZSWIM9Q86XI8 627 aa7.45□□□□□ -1.22
USP44-207ENST00000552237 GALNT12Q8IXK2 581 aa7.45□□□□□ -1.22
USP44-207ENST00000552237 CCDC97Q96F63 343 aaPredicted RBP7.45□□□□□ -1.22
USP44-207ENST00000552237 TOX2Q96NM4 488 aa7.45□□□□□ -1.22
USP44-207ENST00000552237 ZNF576Q9H609 170 aa7.45□□□□□ -1.22
USP44-207ENST00000552237 FAM53CQ9NYF3 392 aa7.45□□□□□ -1.22
USP44-207ENST00000552237 TMEM265A0A087WTH1 108 aa7.44□□□□□ -1.22
USP44-207ENST00000552237 TMPRSS2O15393 492 aa7.44□□□□□ -1.22
USP44-207ENST00000552237 FZD6O60353 706 aa7.44□□□□□ -1.22
USP44-207ENST00000552237 ID3Q02535 119 aa7.44□□□□□ -1.22
USP44-207ENST00000552237 KCNMB1Q16558 191 aa7.44□□□□□ -1.22
USP44-207ENST00000552237 SMYD4Q8IYR2 804 aaPredicted RBP7.44□□□□□ -1.22
USP44-207ENST00000552237 EHD4Q9H223 541 aa7.44□□□□□ -1.22
USP44-207ENST00000552237 SYNGAP1Q96PV0 1343 aa7.44□□□□□ -1.22
USP44-207ENST00000552237 NPR3P17342 541 aa7.43□□□□□ -1.22
USP44-207ENST00000552237 LIG1P18858 919 aa7.43□□□□□ -1.22
USP44-207ENST00000552237 ITIH2P19823 946 aa7.43□□□□□ -1.22
USP44-207ENST00000552237 RAP1GAPP47736 663 aa7.43□□□□□ -1.22
USP44-207ENST00000552237 MLANAQ16655 118 aa7.43□□□□□ -1.22
USP44-207ENST00000552237 BHLHE22Q8NFJ8 381 aaPredicted RBP7.43□□□□□ -1.22
USP44-207ENST00000552237 ZC3H12CQ9C0D7 883 aaKnown RBP7.43□□□□□ -1.22
USP44-207ENST00000552237 MKNK2Q9HBH9 465 aa7.43□□□□□ -1.22
USP44-207ENST00000552237 CCDC87Q9NVE4 849 aa7.43□□□□□ -1.22
USP44-207ENST00000552237 CRIM1Q9NZV1 1036 aa7.43□□□□□ -1.22
USP44-207ENST00000552237 ABL1P00519 1130 aa7.42□□□□□ -1.22
USP44-207ENST00000552237 MESP2Q0VG99 397 aa7.42□□□□□ -1.22
USP44-207ENST00000552237 SF3B2Q13435 895 aaKnown RBP7.42□□□□□ -1.22
USP44-207ENST00000552237 SLC23A3Q6PIS1 610 aa7.42□□□□□ -1.22
USP44-207ENST00000552237 ZSCAN18Q8TBC5 510 aaPredicted RBP7.42□□□□□ -1.22
USP44-207ENST00000552237 FANCD2OSQ96PS1 177 aa7.42□□□□□ -1.22
USP44-207ENST00000552237 SSU72Q9NP77 194 aaKnown RBP7.42□□□□□ -1.22
USP44-207ENST00000552237 NEFLP07196 543 aa7.41□□□□□ -1.22
USP44-207ENST00000552237 FLAD1Q8NFF5 587 aa7.41□□□□□ -1.22
USP44-207ENST00000552237 PPP1R16BQ96T49 567 aa7.41□□□□□ -1.22
USP44-207ENST00000552237 LEFTY1O75610 366 aa7.4□□□□□ -1.22
USP44-207ENST00000552237 HCLS1P14317 486 aaPredicted RBP7.4□□□□□ -1.22
USP44-207ENST00000552237 ITPKAP23677 461 aa7.4□□□□□ -1.22
USP44-207ENST00000552237 FKBP4Q02790 459 aaKnown RBP eCLIP7.4□□□□□ -1.22
USP44-207ENST00000552237 IKZF1Q13422 519 aa7.4□□□□□ -1.22
USP44-207ENST00000552237 TTLL4Q14679 1199 aa7.4□□□□□ -1.22
USP44-207ENST00000552237 KIAA0319Q5VV43 1072 aa7.4□□□□□ -1.22
USP44-207ENST00000552237 WDR89Q96FK6 387 aaPredicted RBP7.4□□□□□ -1.22
USP44-207ENST00000552237 CCDC86Q9H6F5 360 aaKnown RBP7.4□□□□□ -1.22
USP44-207ENST00000552237 PCOLCE2Q9UKZ9 415 aa7.4□□□□□ -1.22
USP44-207ENST00000552237 U3KQE9 123 aa7.4□□□□□ -1.22
USP44-207ENST00000552237 ZNF865P0CJ78 1059 aaPredicted RBP7.39□□□□□ -1.23
USP44-207ENST00000552237 SSFA2P28290 1259 aa7.39□□□□□ -1.23
USP44-207ENST00000552237 OXCT1P55809 520 aa7.39□□□□□ -1.23
USP44-207ENST00000552237 DUSP23Q9BVJ7 150 aa7.39□□□□□ -1.23
USP44-207ENST00000552237 KRTAP4-11Q9BYQ6 195 aa7.39□□□□□ -1.23
USP44-207ENST00000552237 ANO2Q9NQ90 1003 aa7.39□□□□□ -1.23
USP44-207ENST00000552237 PRDM7Q9NQW5 492 aa7.39□□□□□ -1.23
USP44-207ENST00000552237 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.39□□□□□ -1.23
USP44-207ENST00000552237 ZNF157P51786 506 aaPredicted RBP7.38□□□□□ -1.23
USP44-207ENST00000552237 USPL1Q5W0Q7 1092 aa7.38□□□□□ -1.23
USP44-207ENST00000552237 TOP6BLQ8N6T0 577 aa7.38□□□□□ -1.23
USP44-207ENST00000552237 ASB11Q8WXH4 323 aa7.38□□□□□ -1.23
USP44-207ENST00000552237 NPHS2Q9NP85 383 aa7.38□□□□□ -1.23
USP44-207ENST00000552237 TSPAN15O95858 294 aa7.37□□□□□ -1.23
USP44-207ENST00000552237 PTPN12Q05209 780 aaKnown RBP7.37□□□□□ -1.23
USP44-207ENST00000552237 ZP2Q05996 745 aa7.37□□□□□ -1.23
USP44-207ENST00000552237 ZNF211Q13398 564 aaPredicted RBP7.37□□□□□ -1.23
USP44-207ENST00000552237 MPZL3Q6UWV2 235 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms