RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 FOSL2P15408 326 aa16.08■□□□□ 0.16
SNRPF-204ENST00000552085 ZNF804AQ7Z570 1209 aa16.08■□□□□ 0.16
SNRPF-204ENST00000552085 HOOK2Q96ED9 719 aa16.08■□□□□ 0.16
SNRPF-204ENST00000552085 MPHOSPH8Q99549 860 aa16.08■□□□□ 0.16
SNRPF-204ENST00000552085 TTF2Q9UNY4 1162 aaKnown RBP16.08■□□□□ 0.16
SNRPF-204ENST00000552085 PFASO15067 1338 aa16.08■□□□□ 0.16
SNRPF-204ENST00000552085 CHRNDQ07001 517 aa16.07■□□□□ 0.16
SNRPF-204ENST00000552085 PHAXQ9H814 394 aaKnown RBP16.07■□□□□ 0.16
SNRPF-204ENST00000552085 SNAP23O00161 211 aa16.06■□□□□ 0.16
SNRPF-204ENST00000552085 LMOD3Q0VAK6 560 aa16.06■□□□□ 0.16
SNRPF-204ENST00000552085 DCAF15Q66K64 600 aa16.06■□□□□ 0.16
SNRPF-204ENST00000552085 GPAT2Q6NUI2 795 aa16.06■□□□□ 0.16
SNRPF-204ENST00000552085 METTL22Q9BUU2 404 aaPredicted RBP16.06■□□□□ 0.16
SNRPF-204ENST00000552085 HMX1Q9NP08 348 aaPredicted RBP16.06■□□□□ 0.16
SNRPF-204ENST00000552085 OGDHLQ9ULD0 1010 aa16.06■□□□□ 0.16
SNRPF-204ENST00000552085 AK9Q5TCS8 1911 aa16.06■□□□□ 0.16
SNRPF-204ENST00000552085 SYNGAP1Q96PV0 1343 aa16.05■□□□□ 0.16
SNRPF-204ENST00000552085 HMGCRP04035 888 aa16.05■□□□□ 0.16
SNRPF-204ENST00000552085 INPP5BP32019 993 aa16.05■□□□□ 0.16
SNRPF-204ENST00000552085 CRKP46108 304 aa16.05■□□□□ 0.16
SNRPF-204ENST00000552085 COA7Q96BR5 231 aa16.05■□□□□ 0.16
SNRPF-204ENST00000552085 LBHD1Q9BQE6 289 aaPredicted RBP16.05■□□□□ 0.16
SNRPF-204ENST00000552085 ZNF341Q9BYN7 854 aa16.05■□□□□ 0.16
SNRPF-204ENST00000552085 LAS1LQ9Y4W2 734 aaKnown RBP16.05■□□□□ 0.16
SNRPF-204ENST00000552085 LTBP2Q14767 1821 aa16.05■□□□□ 0.16
SNRPF-204ENST00000552085 MAST2Q6P0Q8 1798 aa16.05■□□□□ 0.16
SNRPF-204ENST00000552085 ITGA6P23229 1130 aa16.04■□□□□ 0.16
SNRPF-204ENST00000552085 MFSD14BQ5SR56 506 aa16.04■□□□□ 0.16
SNRPF-204ENST00000552085 TTYH1Q9H313 450 aaPredicted RBP16.04■□□□□ 0.16
SNRPF-204ENST00000552085 LAMA2P24043 3122 aaKnown RBP16.04■□□□□ 0.16
SNRPF-204ENST00000552085 PTPRFP10586 1907 aa16.04■□□□□ 0.16
SNRPF-204ENST00000552085 TAF5LO75529 589 aa16.03■□□□□ 0.16
SNRPF-204ENST00000552085 CACNB3P54284 484 aa16.03■□□□□ 0.16
SNRPF-204ENST00000552085 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
SNRPF-204ENST00000552085 LRRC26Q2I0M4 334 aa16.03■□□□□ 0.16
SNRPF-204ENST00000552085 DUSP27Q5VZP5 1158 aa16.03■□□□□ 0.16
SNRPF-204ENST00000552085 COL6A1P12109 1028 aa16.02■□□□□ 0.16
SNRPF-204ENST00000552085 MIGA2Q7L4E1 593 aa16.02■□□□□ 0.16
SNRPF-204ENST00000552085 FAM83AQ86UY5 434 aa16.02■□□□□ 0.16
SNRPF-204ENST00000552085 CXCL11O14625 94 aa16.01■□□□□ 0.15
SNRPF-204ENST00000552085 TMPOP42166 694 aaKnown RBP16.01■□□□□ 0.15
SNRPF-204ENST00000552085 TRIM32Q13049 653 aa16.01■□□□□ 0.15
SNRPF-204ENST00000552085 USP38Q8NB14 1042 aa16.01■□□□□ 0.15
SNRPF-204ENST00000552085 ARIH1Q9Y4X5 557 aaPredicted RBP16.01■□□□□ 0.15
SNRPF-204ENST00000552085 PLXNB2O15031 1838 aa16.01■□□□□ 0.15
SNRPF-204ENST00000552085 RPAP1Q9BWH6 1393 aaPredicted RBP16■□□□□ 0.15
SNRPF-204ENST00000552085 TMOD2Q9NZR1 351 aa16■□□□□ 0.15
SNRPF-204ENST00000552085 ZNF112Q9UJU3 913 aa16■□□□□ 0.15
SNRPF-204ENST00000552085 FRMPD3Q5JV73 1810 aa15.99■□□□□ 0.15
SNRPF-204ENST00000552085 DDX58O95786 925 aaKnown RBP15.99■□□□□ 0.15
SNRPF-204ENST00000552085 IGKV5-2P06315 115 aa15.99■□□□□ 0.15
SNRPF-204ENST00000552085 SMAD3P84022 425 aaKnown RBP15.99■□□□□ 0.15
SNRPF-204ENST00000552085 NOL9Q5SY16 702 aaKnown RBP15.99■□□□□ 0.15
SNRPF-204ENST00000552085 FASTKD5Q7L8L6 764 aaKnown RBP15.99■□□□□ 0.15
SNRPF-204ENST00000552085 SMCR8Q8TEV9 937 aaPredicted RBP15.99■□□□□ 0.15
SNRPF-204ENST00000552085 SLC45A1Q9Y2W3 748 aa15.99■□□□□ 0.15
SNRPF-204ENST00000552085 SHHQ15465 462 aa15.98■□□□□ 0.15
SNRPF-204ENST00000552085 FKBP1CQ5VVH2 108 aa15.98■□□□□ 0.15
SNRPF-204ENST00000552085 TDRD7Q8NHU6 1098 aaKnown RBP15.98■□□□□ 0.15
SNRPF-204ENST00000552085 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
SNRPF-204ENST00000552085 MAP3K2Q9Y2U5 619 aa15.98■□□□□ 0.15
SNRPF-204ENST00000552085 A0A0G2JLL6 359 aaPredicted RBP15.97■□□□□ 0.15
SNRPF-204ENST00000552085 HDLBPQ00341 1268 aaKnown RBP15.97■□□□□ 0.15
SNRPF-204ENST00000552085 UBE3BQ7Z3V4 1068 aa15.97■□□□□ 0.15
SNRPF-204ENST00000552085 PRRT2Q7Z6L0 340 aaPredicted RBP15.97■□□□□ 0.15
SNRPF-204ENST00000552085 ANKRD13CQ8N6S4 541 aa15.97■□□□□ 0.15
SNRPF-204ENST00000552085 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
SNRPF-204ENST00000552085 ADAMTS19Q8TE59 1207 aa15.97■□□□□ 0.15
SNRPF-204ENST00000552085 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
SNRPF-204ENST00000552085 CDH23Q9H251 3354 aa15.96■□□□□ 0.15
SNRPF-204ENST00000552085 PHIPQ8WWQ0 1821 aa15.96■□□□□ 0.15
SNRPF-204ENST00000552085 ANKRD18BA2A2Z9 1011 aa15.96■□□□□ 0.15
SNRPF-204ENST00000552085 H7C1W4 665 aa15.96■□□□□ 0.15
SNRPF-204ENST00000552085 CSF1RP07333 972 aa15.96■□□□□ 0.15
SNRPF-204ENST00000552085 GADL1Q6ZQY3 521 aa15.96■□□□□ 0.15
SNRPF-204ENST00000552085 ATXN2LQ8WWM7 1075 aaKnown RBP15.96■□□□□ 0.15
SNRPF-204ENST00000552085 C1QTNF1Q9BXJ1 281 aa15.96■□□□□ 0.15
SNRPF-204ENST00000552085 GRIK5Q16478 980 aa15.95■□□□□ 0.14
SNRPF-204ENST00000552085 CWF19L2Q2TBE0 894 aaKnown RBP15.95■□□□□ 0.14
SNRPF-204ENST00000552085 C9orf50Q5SZB4 431 aa15.95■□□□□ 0.14
SNRPF-204ENST00000552085 MAP3K21Q5TCX8 1036 aa15.95■□□□□ 0.14
SNRPF-204ENST00000552085 TEKT1Q969V4 418 aa15.95■□□□□ 0.14
SNRPF-204ENST00000552085 SNX27Q96L92 541 aa15.95■□□□□ 0.14
SNRPF-204ENST00000552085 UHRF1Q96T88 793 aaPredicted RBP15.95■□□□□ 0.14
SNRPF-204ENST00000552085 GJD2Q9UKL4 321 aa15.95■□□□□ 0.14
SNRPF-204ENST00000552085 HCN4Q9Y3Q4 1203 aa15.95■□□□□ 0.14
SNRPF-204ENST00000552085 PRKAR2AP13861 404 aaKnown RBP15.94■□□□□ 0.14
SNRPF-204ENST00000552085 NEXNQ0ZGT2 675 aa15.94■□□□□ 0.14
SNRPF-204ENST00000552085 FAM110CQ1W6H9 321 aa15.94■□□□□ 0.14
SNRPF-204ENST00000552085 TRIB2Q92519 343 aa15.94■□□□□ 0.14
SNRPF-204ENST00000552085 ZDHHC15Q96MV8 337 aa15.94■□□□□ 0.14
SNRPF-204ENST00000552085 ASB2Q96Q27 587 aa15.94■□□□□ 0.14
SNRPF-204ENST00000552085 PRKAG2Q9UGJ0 569 aa15.94■□□□□ 0.14
SNRPF-204ENST00000552085 NCOR1O75376 2440 aa15.94■□□□□ 0.14
SNRPF-204ENST00000552085 NEURL1BA8MQ27 555 aa15.93■□□□□ 0.14
SNRPF-204ENST00000552085 NEUROD2Q15784 382 aa15.93■□□□□ 0.14
SNRPF-204ENST00000552085 KSR2Q6VAB6 950 aa15.93■□□□□ 0.14
SNRPF-204ENST00000552085 RNF39Q9H2S5 420 aa15.93■□□□□ 0.14
SNRPF-204ENST00000552085 DOCK2Q92608 1830 aa15.92■□□□□ 0.14
SNRPF-204ENST00000552085 PI4KAP2A4QPH2 592 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms